Mus pahari (shrew mouse): 110313031
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Entry
110313031 CDS
T05929
Symbol
Cdx2
Name
(RefSeq) homeobox protein CDX-2 isoform X1
KO
K22234
homeobox protein CDX2
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09160 Human Diseases
09162 Cancer: specific types
05226 Gastric cancer
110313031 (Cdx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110313031 (Cdx2)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
110313031 (Cdx2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
110313031
NCBI-ProteinID:
XP_021042706
Ensembl:
MGP_PahariEiJ_G0024603
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All DBs
Position
23:complement(37389032..37395459)
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AA seq
310 aa
AA seq
DB search
MYVSYLLDKDVSMYPSSVRHSGGLNLATQNFVSPPQYPDYGGYHVAAAAAATANLDSAQS
PGPSWPTAYGAPLREDWNGYAPAGAAAANAVAHGLNGGSPAAAMGYSSPAEYHAHHHPHH
HPHHPAASPSCASGLLQTLNLGPPGPAATAAAEQLSPSGQRRNLCEWMRKPAQPSLGSQV
KTRTKDKYRVVYTDHQRLELEKEFHFSRYITIRRKSELAATLGLSERQVKIWFQNRRAKE
RKIKKKQQQQQQQQQQPPPPPPQPAQPQPGALRSVPEPLSPVTSLQGSVPGSVPGVLGPA
GGVLNSTVTQ
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgagttaccttctggacaaggacgtgagcatgtatcctagctccgtgcgccac
tccggcggcctcaacctggctacgcagaactttgtcagtcctccgcagtacccggactac
ggtggttaccacgtggcggccgcggcggctgctacggcgaacttggacagcgctcagtcc
ccagggccatcctggcccaccgcgtacggcgcccctctccgcgaggactggaatggctac
gcacccgcgggcgctgcggcagccaacgcggtagcccacggtctcaatggtggctccccg
gccgccgctatgggctacagcagccctgccgaataccacgcgcaccatcacccgcatcat
cacccgcaccatccggccgcctcgccgtcctgcgcctccggcttgcttcagacgctcaac
ctcggccctccggggcccgcagccaccgccgccgccgaacagctgtcccccagcggccag
cggcgaaacctgtgcgagtggatgcggaagcccgcgcagccgtccctaggaagccaagtg
aagaccaggacaaaagacaaataccgggtggtgtacacagaccatcagcggctggagctg
gagaaggagtttcactttagtcgatacatcaccatcaggaggaaaagtgagctggctgcc
acacttgggctctccgagaggcaggttaaaatttggtttcagaaccgcagagccaaggag
aggaaaatcaagaagaaacagcagcagcagcaacagcagcagcaacagcctccaccgccg
ccgccacaacctgcccagccccagccgggtgccctgcggagcgtgcccgagcccttgagt
cctgtgacctctttgcaaggctctgtgcctggttctgttcctggggttctggggccagct
ggaggggttttaaactccactgtcacccagtga
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