Mus pahari (shrew mouse): 110313115
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Entry
110313115 CDS
T05929
Symbol
Ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28
KO
K24936
tetratricopeptide repeat protein 28
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mpah03037
]
110313115 (Ttc28)
Cilium and associated proteins [BR:
mpah03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
110313115 (Ttc28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TPR_10
TPR_MalT
TPR_14
Rapsyn_N
RPN7
TPR_17
TPR_16
TPR_19
TPR_9
TPR_6
TPR_NPHP3
TPR_11
ANAPC5
OrgC
T4SS
Motif
Other DBs
NCBI-GeneID:
110313115
NCBI-ProteinID:
XP_021042805
Ensembl:
MGP_PahariEiJ_G0024137
LinkDB
All DBs
Position
23:731930..1153986
Genome browser
AA seq
2427 aa
AA seq
DB search
MAMLTIPLFGARTVVQRSPDEPALSKAEFVEKVRQSNQACHDGDFHTAIVLYNEALAVDP
QNCILYSNRSAAYMKTQQYHKALDDAIKARLLNPKWPKAYFRQGVALQYLGRHADALAAF
ASGLAQDPKSLQLLVGMVEAAMKSPMRDTLEPTYQQLQKMKLDKSPFVVVSVVGQELLTA
GHHGASVVVLEAALKIGTCSLKLRGSVFSALSSAHWSLGNTEKSTGYMQQDLDVAKTLGD
QTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMKLKDREAASSALSSLGHVYTAIGD
YPNALASHKQCVLLAKQSKDDLSEARELGNMGAVYIAMGDFENAVQCHEQHLRIAKDLGS
KREEARAYSNLGSAYHYRRNFDKAMSYHNCVLELAQELMEKPIEMRAYAGLGHAARCMQD
LERAKQYHEQQLGIAEDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQELSD
YAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISMEVNDRASQASTHGNLAVAYQALGA
HDRALQHYQNHLNIARELRDIQSEARALSNLGNFHCSRGEYVQAAPYYEQYLRLAPDLQD
MEGEGKVCHNLGYAHYCLGNYQEAVKYYEQDLALAKDLHDKLSQAKAYCNLGLAFKALLN
FAKAEECQKYLLSLAQSLDNSQAKFRALGNLGDIFICKKDVNGAIKFYEQQLGLSHHVKD
RRLEASAYAALGTAYRMVQKYDKALGYHTQELEVYQELSDLPGECRAHGHLAAVYMALGK
YTMAFKCYQEQLELGRKLKEPSLEAQVYGNMGITKMNMNVMEDAIGYFEQQLAMLQQLSG
NESVLDRGRAYGNLGDCYEALGDYEEAIKYYEQYLSVAQSLNRMQDQAKAYRGLGNGHRA
TGSLQQALVCFEKRLVVAHELGEASNKAQAYGELGSLHSQLGNYEQAISCLERQLNIARD
MKDRALESDAACGLGGVYQQMGEYDTALQYHQLDLQIAEETDNPTCQGRAYGNLGLTYES
LGTFERAVVYQEQHLSIAAQMNDLVAKTVSYSSLGRTHHALQNYSQAVMYLQEGLRLAEQ
LGRREDEAKIRHGLGLSLWASGNLEEAQHQLYRASALFETIRHEAQLSTDYKLSLFDLQT
SSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPYSPITIDQILEMV
NAQRGLVLYYSLAAGYLYSWLLAPGAGILKFHEHYLGDNSVESSSDFQAGGSAALPVATS
STLEQHIASVREALGVESYYSRACASSETESEAGDIMEQQLEEMNKQLNSVTDPTGFLRM
VRHNNLLHRSCQSMTSLFSGTVSPSKDGTSSLPRRQNSLAKPPLRALYDLLIAPMEGGLM
HSSGPVGRHRQLVLVLEGELYLVPFALLKGSASNEYLYERFTLIAVPAVRSLGPHSKCHL
RKTPPTYSSSTAMAAVIGNPKLPSAVMDRWLWGPMPSAEEEAFMVSELLGCQPLVGSMAT
KERVMSALSQAECVHFATHVSWKLSALVLTPSTEGNPASSKSSFGHPYTIPESLRVQDDA
SDVESISDCPPLRELLLTAADLLDLRLSMKLVVLSSSQEANGRVTADGLVALTRAFLAAG
AQCVLVALWPVPVAASKMFVHAFYSSLLNGLKASASLGEAMKAVQSSKAFSHPSNWAGFM
LIGSDVKLNSPSSLIGQALTEILQHPERARDALRVLLHLVEKSLQRIQNGQRNAMYTSQQ
SVENKVGGIPGWQALLTAVGFRLDPAASGLPAAVFFPTADPGDRLQQCSSTLQALLGLPN
PALQALCKLITASETGEQLISRAVKNMVGMLHQVLVQLQACEKEQDFASAPIPVSLSVQL
WRLPGCHEFLAALGFDLCEVGQEEVILKTGKQASRRTTHFALQSLLSLFDSTELPKRLSL
DSSSSLESLASAQSVSNTLPLGYQHPPFSPTGADSIASDAISVYSLSSIASSMSFVSKPE
GGLEGGGPRGRQDYDRSKSTHPQRATLPRRQTSPQARRGASKEEEEYEGFSIISMEPLAT
YQGEGKTRFSPDPKQPCVKAPGGVRLSVSSKGSVSTPNSPVKMTLIPSPNSPFQKVGKLA
SSDTGESDQSSTETDSTVKSQEESTPKLDPQELAQRILEETKSHLLAVERLQRSGGPASP
DRDDNMVAPSSTTVFRASETSAFSKPILSHQRSQLSPLTVKPQPPARSSSLPKVSSPATS
EVSGKDGLSPPGSSHPSPGRDTPVSPADPPLFRLKYPSSPYSAHISKSPRNTSPACSAPS
PALSYSSAGSARSSPADAPDEKVQAVHSLKMLWQSTPQPSRGPRKTCRGAPGTLTSKRDV
LSLLNLSPRHGKEEGGADRLELKELSLQRRDEVPPKVPTNGHWCTDTATLTTAGGRSTTA
APRPLRLPLANGYKFLSPGRLFPSSKC
NT seq
7284 nt
NT seq
+upstream
nt +downstream
nt
atggccatgttaactattcctctctttggtgctaggactgttgtccagagaagccctgac
gagccagcactgagcaaagctgagtttgttgagaaagttcgtcagagtaaccaggcctgt
catgatggagacttccacacggctatcgtgctgtacaacgaagccctggcagttgaccct
cagaactgcattttgtatagcaacagatctgcagcctacatgaaaacccagcagtaccac
aaggcgctggacgatgcgatcaaagcccggctcctcaaccccaagtggccaaaggcatac
ttccgacagggtgttgccctccagtaccttggacgtcacgcggacgccctggcagccttt
gcatctggactggctcaagaccccaaaagtctccagctcctggtgggaatggtggaagct
gccatgaagtctcccatgagagacaccctggagcccacttaccagcagcttcagaaaatg
aaactggacaagagtccctttgtggtcgtgtctgtggttgggcaggaactcctgacagcc
ggccaccacggggcctccgtggttgtcttagaagctgccctgaagattggcacttgcagc
ctcaaactgagaggctctgtcttctccgccctgagcagcgcacactggtcccttggcaac
acagagaagagcacggggtacatgcagcaagacttggatgtagccaagaccttaggtgac
cagacaggagaatgccgagctcatgggaacctaggctctgcattcttttccaaggggaat
taccgagaggccctcacaaaccacaggcatcagctggtgctcgccatgaagctcaaggac
cgggaggcagcatcgtcagcgctgagcagcctgggtcacgtgtacaccgccatcggagac
taccccaacgcgctggccagtcacaagcagtgcgtcctcctggccaagcagtccaaagat
gacctttccgaagcccgagaactcgggaacatgggagccgtgtacatcgccatgggcgac
ttcgagaacgccgtgcagtgccacgaacagcacctgcggatcgccaaggatctggggagc
aagcgcgaggaggcccgtgcctacagcaacctgggcagcgcctaccactaccggaggaac
tttgacaaggccatgtcctaccacaactgtgtgctggagctggcacaggagctgatggag
aagcccatcgagatgcgagcctacgctggcttgggccatgcagccaggtgcatgcaggac
ctggagagggcaaaacagtaccacgagcagcagctgggcattgcggaggacctcaaggac
cgggcagcggagggccgcgcatcctccaatctggggataatccaccagatgaaaggagat
tacgacacagccctgaagctccacaagacccacctgtgcatcgcccaagagctgagcgac
tacgcggcccaaggccgtgcctacggaaacatgggcaacgcctacaacgccctgggcatg
tacgaccaagctgtcaagtaccatcgtcaagagctgcagatctccatggaagtgaacgac
cgcgcctctcaggcttcgactcacgggaacctggccgtcgcctaccaggccctgggggcc
catgaccgagcgctgcagcactaccagaaccacctgaacatcgcccgggagctgagagac
atccagagcgaggcccgggctctcagcaacctcgggaacttccactgctcccgcggagag
tacgtccaggctgcgccctactacgagcagtacctccgcctcgctcccgacctccaggac
atggagggggaagggaaggtctgccacaacctcggctatgcccactactgcctcggaaac
taccaggaggcagtgaagtactatgagcaggatctggctctggccaaagacctccacgac
aaactgagccaggcgaaggcctactgcaacttgggcctggcgttcaaggcgctgctgaac
tttgctaaggccgaggagtgccagaagtacctcctgtccctagcccagtccctggataat
tcccaggcaaagtttcgagccctagggaacctgggcgacatattcatctgcaaaaaggac
gtaaacggtgcgataaagttctacgagcaacagctgggcctatctcaccacgtgaaagac
agacggctggaggccagtgcctatgcggccctgggtaccgcctaccgaatggtccagaag
tacgacaaggccttgggttatcacacacaggagctggaggtctaccaggaactgagtgac
ctgccaggggagtgccgggcccacgggcacctggcggccgtctacatggccctcggcaaa
tacacaatggcgttcaagtgttaccaggagcagctggagctggggcggaagctgaaggag
ccgagcctggaagcccaggtgtacggcaacatgggcatcaccaagatgaacatgaacgtg
atggaggacgccatcggctacttcgagcagcagttggccatgctgcagcagctcagcggg
aacgagtctgtgctggacaggggccgggcctacggcaacctgggggattgctacgaggcc
ctgggggactacgaggaggccatcaagtactacgagcagtacctgtctgtagcccaaagc
ctgaaccgcatgcaagaccaagccaaggcctaccggggtctaggaaacgggcacagggcg
acgggaagcctgcagcaggccctcgtgtgcttcgagaagaggctggtggtggcccatgag
ctcggggaggcctccaataaagctcaggcctacggagagctggggagcctccacagccag
ttagggaactacgagcaagccatctcctgccttgaacgccagctgaacatcgccagggac
atgaaggaccgagccctggaaagcgacgcagcctgcggcctggggggtgtctaccagcag
atgggagagtacgacacagccctgcagtaccaccagctcgacctgcagattgccgaggag
acagacaaccccacgtgccagggccgggcctacgggaacctgggtctcacctatgagtcc
ctgggcacctttgagagggctgtggtctatcaggagcagcacctgagcatcgcggcgcag
atgaacgacttggtggccaagactgtgtcctacagcagcctgggaaggactcaccatgcc
ctgcagaactattcgcaggccgtcatgtacttacaggaaggtttaaggttagctgagcaa
ctgggtcgaagagaagatgaagcaaaaattcgccatggtcttggtctctccctttgggca
agcggaaacctggaggaggctcagcaccagctttacagggcgtcggccttgtttgaaacg
atccggcacgaggcacagctgagcacagactacaagctctctctgttcgacctgcagaca
tcatcctaccaggccttgcagcgggtgctcgtcagcctaggccaccacgatgaagccctg
gctgtagcagaaaggggccggacgagagcgttcgccgacctgctggtggaaagacagacg
ggacaacaggactctgacccctactcgcccatcaccatcgaccagatcttggagatggtc
aacgcgcagcggggactcgtgctgtactactccctggccgcaggctacctctacagctgg
cttcttgctcctggggcggggatcctgaagtttcacgaacattacttgggtgataattcg
gtggaaagttccagtgatttccaagccggtggcagtgcagccttgcccgtagcaaccagc
tctacactggaacagcacatcgccagcgtccgggaggccctgggggtggagtcttactac
tccagggcctgtgctagcagtgagacagaaagcgaagctggagacatcatggaacagcag
ttggaggagatgaacaagcagcttaactcggtgaccgaccctacgggcttcctgaggatg
gtgcgccacaacaacctcctgcacaggagctgccagagcatgacaagcttgttcagtggt
acagtgtcgcccagcaaggatgggacctcctctctgcccaggaggcagaactccctggcc
aagcccccactccgcgccctgtacgatctgctcatcgcgcccatggaagggggcctgatg
cactccagcggccccgtgggccggcaccggcagctggtcctggttctggagggggagctc
taccttgtcccctttgctctcctgaagggcagtgcctccaacgagtacctgtacgaacgc
tttaccctcattgctgtgcccgccgtccgctcgcttggtccacactccaagtgtcacctg
aggaagaccccgcccacgtattccagctccactgccatggcagccgtcataggcaaccct
aagctcccatcagcagtgatggacaggtggctgtggggaccgatgccctcggcagaagag
gaggcattcatggtgtcagagctcctgggctgtcagcccctggtgggcagtatggccacc
aaggagagggtcatgagtgccctgtcccaggccgaatgtgtccactttgctacccacgtc
tcttggaagctatcggccttggtcctcacacccagcacggagggcaaccccgccagcagc
aagagctcctttggccacccctacacgatccccgagtcactgcgggtgcaggacgatgcg
agcgatgtcgagagcatctcggactgcccgccactgagggagctgctgctcacagcggct
gacctcctggacctgcggctgtccatgaaactggtggtgctgagctcgtcccaggaggcc
aacggccgcgtcacagcagacggcctggtggcactgacacgggccttcctggctgctggc
gcccagtgtgtgcttgtggctctgtggcctgtgccggtcgcagcttccaagatgttcgtt
cacgccttctactcgtccctgctgaatggcctgaaagccagcgcctccctgggcgaggcc
atgaaggcggtgcagagcagcaaggccttctcgcatccctccaactgggcaggtttcatg
cttatcgggagtgacgtcaagctgaacagcccctcatcactcatcggccaagcgctcaca
gagatcctgcagcacccggagcgggcacgggatgccctgcgcgtgctgctgcacctggtg
gagaagtccctgcagcggatccagaacggacagcgcaacgccatgtacacatctcagcag
agcgtcgagaacaaagtgggcggcatccctggatggcaggctctcctcaccgcagtgggc
ttccggctggaccctgcagccagcgggctgccggcagccgtcttcttcccaaccgcggac
ccaggcgacaggctgcagcaatgcagtagcactctccaggccctgctgggtctgcccaac
ccagccctccaagcactgtgcaaactcatcacggcctcagagacgggggagcagctcatc
agccgggctgttaaaaatatggtgggaatgctccatcaggtgctggttcagctgcaggcc
tgcgagaaggaacaggactttgcctcggctcccattccagtctccctcagtgtccagcta
tggcggctcccggggtgccacgagttcctggcagctctcgggtttgacctgtgtgaagtg
ggccaagaggaagtgatcctgaaaactggtaaacaggctagccggcgcaccacccacttc
gctctccagtccctgctgtcactcttcgattccaccgagctccccaagcgcctcagcctg
gacagttcctcctccctggagtccctggcatcagcacagtctgtgtccaacaccctgccc
ttgggctaccagcaccctcctttctcgcccacgggcgcagacagcattgcctccgatgcc
atctccgtgtacagcctcagctcgatcgcatcctccatgagttttgtctccaagcccgag
gggggtttggaaggcgggggtccccgaggacgacaggactatgataggtccaagagcacc
cacccgcaacgagccaccctgccacggcgccagacgtccccacaggccagacgtggggcc
agcaaggaagaagaagaatacgaggggttctccatcatcagcatggagcctctggcaacc
taccaaggtgaggggaagacacgtttctccccagaccccaagcagccctgtgtcaaagca
ccaggtggcgtgagactttcggtcagctccaagggaagcgtcagcactcccaactccccc
gtgaagatgaccttgatccccagcccaaactcacccttccagaaagtgggaaaactggca
agctcagacacaggtgagtcggaccagtccagcacggagaccgacagcactgtgaagtcc
caggaggagagcaccccaaagctggacccccaggagctggcccagaggatcctagaggag
accaaaagccacctcctggcagtagagcgccttcagaggagtggtggcccagccagccct
gaccgggatgataacatggtagcacccagcagcaccacagtcttcagggcgtcagagacc
agcgccttcagcaagcctatcctctctcatcagaggagccagctgtcgccactcacagtc
aaaccacagcccccagccaggagctcatctcttcccaaggtgagcagccctgccacgtca
gaggtgtcaggcaaagatggcctgagccctcctggcagcagccacccgtcacctggccgc
gacaccccagtctccccagcagacccaccactcttcagactcaagtaccccagctctcct
tacagtgctcacatttccaagtccccccggaacacttcccctgcgtgcagcgcgccgtct
ccagcactctcgtactcttcagccggctctgctcgatccagtccagctgatgccccagat
gagaaggtgcaggccgtgcacagcctcaagatgctctggcagagcacaccccagccctcc
aggggcccccggaaaacatgtcggggtgcaccgggaaccttaacatcaaaaagagatgtc
ctcagcctgctgaacttgtcccctcggcacggcaaggaggagggtggggcagacagactg
gaactgaaggagctgtccctgcagcgacgcgacgaggtgccacccaaagtccccaccaac
ggccactggtgcacggatacagcaacactgaccacagccggtggccgcagcaccacagct
gccccacgccctctgagacttcccttggccaacggttacaagttcctgtccccaggaagg
ctcttcccttcctccaaatgttaa
DBGET
integrated database retrieval system
