Mus pahari (shrew mouse): 110313282
Help
Entry
110313282 CDS
T05929
Symbol
Hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04613
Neutrophil extracellular trap formation
mpah05014
Amyotrophic lateral sclerosis
mpah05034
Alcoholism
mpah05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
110313282 (Hdac6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
110313282 (Hdac6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110313282 (Hdac6)
09165 Substance dependence
05034 Alcoholism
110313282 (Hdac6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mpah01009
]
110313282 (Hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110313282 (Hdac6)
04131 Membrane trafficking [BR:
mpah04131
]
110313282 (Hdac6)
03036 Chromosome and associated proteins [BR:
mpah03036
]
110313282 (Hdac6)
Enzymes [BR:
mpah01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
110313282 (Hdac6)
Protein phosphatases and associated proteins [BR:
mpah01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
110313282 (Hdac6)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
110313282 (Hdac6)
Membrane trafficking [BR:
mpah04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
110313282 (Hdac6)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
110313282 (Hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
110313282
NCBI-ProteinID:
XP_021042954
Ensembl:
MGP_PahariEiJ_G0031457
LinkDB
All DBs
Position
X:complement(2028218..2046655)
Genome browser
AA seq
1146 aa
AA seq
DB search
MTSTGQDSSTRQRKSRQNPQSPLQDSSATLKRGGKKCAVPHSSPNLAEVKKKGKMKKLSQ
PAEEDLVVGLQGLDLNPETRVPVGTGLVFDEQLNDFHCLWDDSFPENPERLHAIKEQLIL
EGLLGRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRVLAGTYDSVYLHPNSY
SCACLATGSVLRLVDALMGSEIRNGMAVIRPPGHHAQRSLMDGYCMFNHLAVAARYAQKK
HRIQRILIVDWDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTIGFGQGQ
GYTINVPWNQVGMRDADYIAAFLHILLPVAVEFQPQLVLVAAGFDALHGDPKGEMSATPA
GFAHLTHLLMGLAGGKLILSLEGGYNLHALAKGVSASLHTLLGDPCPMLESRVVPCASAQ
TSISWTLEALEPFWEVLERPVETQEEDEVEKDMLEEEEEGGWEAAALPMDTWPLLQNRTG
LVYDERMMSHCNVWDNHHPESPQRILRIMSHLEEVGLAARCLILPARPALDSELLTCHSA
EYVEHLRTTEKMKTRDLHREGANFDSIYICPSTFACAKLATGAACRLVEAVLSGEVLNGI
AVVRPPGHHAEPGAACGFCFFNSVAVAARHAQVIAGRALRILIVDWDVHHGNGTQHIFED
DPSVLYVSLHRYDRGTFFPMGDEGASSQVGRDAGIGFTVNVPWNGPRMGDADYLASWHRL
VLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLAGGRIILILEGGY
NLASISESMAACTHSLLGDPPPPLTLLRPPQSGALASISEVIQVHRKYWCSLRLMKMEDK
DECSSSRLVIKKLPPTASPVSAKGMTTPKGKVPEESMKKTIAELPAKESTLGQTKSKTAK
AVLAQGQSSEQTAKGTTLDLATSKETVGGATTDQWASAAAPENFPNQTTSEEAVGETEPP
ASYPNKQTTGASPLQGVPAQQSLQLGVLSALELSREAEEAHDSEEGLLGEAAGGQDMNSL
MLTQGFGDFNTQDVFYAVTPLSWCPHLMAVCPIPAAGLDVSQPCKTCGTVQENWVCLTCY
QVYCSRYVNAHMVCHHEASEHPLVLSCVDLSTWCYVCQSYVHHEDLQDVKNAAHQNKFGE
DIPHSH
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggccaagattcctctactaggcagcgaaagagtaggcagaatccccag
tcaccccttcaggactccagcgccaccttgaagcgtggtggtaagaagtgtgctgtaccc
cactccagccccaatctagcggaggtaaagaagaaaggcaaaatgaagaagctcagccaa
ccagctgaagaagacctagttgtgggccttcaagggctggatctgaaccctgagacaaga
gtcccagttggtactggattggtgtttgatgagcaactaaatgacttccattgcctttgg
gatgacagcttccctgaaaaccctgagcggctccatgccatcaaagagcagctgatcctg
gagggcctcctgggccgctgtgtgtcctttcaggcccggtttgctgagaaggaggagctg
atgttggttcacagcctggaatacattgatctgatggagacaacccagtacatgaatgaa
ggggagcttcgagtgctggcaggcacctatgattcagtatatctgcatccgaactcatat
tcctgtgcctgcctggctacaggctctgtcctcaggctggtagatgcactcatggggagt
gagattcggaatggcatggccgtcatcaggcctcctggacaccatgctcagcgcagtctt
atggatgggtattgcatgttcaaccatctggctgtggctgcccgctatgcacaaaagaag
caccgcattcagaggattctcatcgtggactgggatgtgcaccatggtcaaggaacacag
ttcatcttcgaccaggatcccagtgtcctctatttctccatccaccgatatgaacatggt
cgcttctggccccatcttaaggcttctaactggtccactataggttttggccaaggccaa
ggatataccatcaatgtaccttggaaccaggtggggatgcgggatgctgactacattgct
gctttcctgcacatcctgctgccagttgccgttgagtttcagcctcaactggtcctggtg
gccgctggatttgatgccctccacggagaccccaagggagagatgtctgccactccagca
ggatttgcccacctaactcatttgctcatgggtttggcaggaggcaagttgattctgtct
ctggagggtggctataacctccatgccctggctaagggggtcagtgcttcactccacacc
cttcttggagacccttgccccatgttggagtcccgtgttgtaccttgtgcaagcgcccag
acttccatctcctggactctagaagcccttgaacccttctgggaggtcttggagagacca
gttgagacccaggaggaagatgaagtggaaaaagacatgctagaagaggaggaggaaggc
ggctgggaggccgctgcactgcccatggatacatggccactgctccagaaccgcactggg
ctggtctatgatgagaggatgatgagccactgcaatgtctgggacaatcatcaccctgag
tcacctcagcgcatcttacgcatcatgtctcacctggaggaggtgggccttgcggctcgc
tgtctcatcctacctgctcggcctgccctggactctgagctccttacctgccacagtgct
gagtacgtggagcatctccgcacgacagaaaagatgaaaacccgggatctgcaccgtgaa
ggtgccaattttgactccatctacatctgccccagcacctttgcctgcgcaaagctggcc
acaggcgccgcttgccgcctggtggaagcagtgctctcgggagaggttctgaatggcatt
gcagtagtgcgccctccaggacaccatgcggagccaggggctgcttgtggtttctgcttt
ttcaattcagtagctgtagctgctcgccatgcccaggtcattgctggacgtgccctgcgg
atcctaatcgtagattgggatgttcatcacggtaatggaactcagcacatatttgaggat
gaccccagtgtattatacgtgtccctgcaccggtatgaccgtggcactttcttcccaatg
ggggatgagggtgccagtagccaagtaggccgagatgcaggtataggcttcactgtcaac
gtgccctggaatgggccccgcatgggtgatgctgattatctggcttcatggcatcgtctg
gtacttcccatcgcctatgagtttaacccagaactggtgttgatctcagctggctttgat
gctgcacaaggggacccactggggggctgccaagtgacgccggagggttatgcccacctc
acccacctactgatgggccttgccggtggccgtattattcttattctagagggtggatac
aatttggcatccatctccgaatctatggctgcctgcacccattctctccttggagaccca
ccacccccgctcactttgctgcgaccaccacagtcaggagccctggcttcaatcagtgag
gtcatccaagtccatcgcaaatactggtgcagtttgcggttgatgaaaatggaagacaag
gacgaatgctctagttctaggcttgtcatcaagaagctgcccccaacagccagtcctgtg
tcagctaagggaatgaccacaccgaaagggaaggttcccgaagaaagcatgaagaagacc
atagcagaactacctgcgaaagagtctactctaggccagactaaatcaaagacagctaag
gcagtgcttgctcagggccagtcctcagaacaaactgcaaagggaactacactggacctg
gctacctcaaaggagactgtgggaggagccacgacggaccagtgggcctcagcagctgct
ccggaaaactttcctaaccagaccacctccgaggaggctgtgggagaaactgagccacca
gcctcatatccaaacaagcagaccacaggggcttcacctctgcagggagtcccggcccag
cagtccctacagcttggggttctcagcgctttggagctaagcagagaagcagaggaagcc
catgactccgaggaaggcctgctaggggaagccgctggaggtcaggacatgaacagcttg
atgctgacccaaggatttggggactttaatacccaggatgtattttatgctgtgacccca
ctatcctggtgtccccatttgatggcagtgtgccccatccctgcagcaggcctagatgtg
tcccaaccttgtaagacttgtggaacagtccaggagaactgggtgtgtctgacttgctat
caggtgtactgcagtcgctatgtcaatgcccatatggtctgccaccatgaagcctctgaa
cacccgctggtcctcagctgtgttgacctgtctacctggtgttatgtctgtcagagttat
gtccaccacgaggatctccaagatgtgaagaacgctgcccaccagaacaagtttggggag
gacataccccattcacactaa
DBGET
integrated database retrieval system
