Mus pahari (shrew mouse): 110313285
Help
Entry
110313285 CDS
T05929
Symbol
Cstf2
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110313285 (Cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110313285 (Cstf2)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
110313285 (Cstf2)
U7-dependent histone pre-mRNA processing factors
110313285 (Cstf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
110313285
NCBI-ProteinID:
XP_021042959
Ensembl:
MGP_PahariEiJ_G0031923
LinkDB
All DBs
Position
X:113135989..113163946
Genome browser
AA seq
599 aa
AA seq
DB search
MAGLPVRDPAVDRSLRSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYG
FCEYQDQETALSAMRNLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVIESPYGESIS
PEDAPESISKAVASLPPEQMFELMKQMKLCVQNSPQEARNMLLQNPQLAYALLQAQVVMR
IVDPEIALKILHRQTNIPTLISGNPQPVHVAGPGSGPNVSMNQQNPQAPQAQSLGGMHVN
GAPPMMQASMPGGVPAPVQMAAAVAGPGPGSLAPAGVMQAQVGMQGAGPVPMERGQGTLQ
HSPVGPAGPASIERVQVPMQDPRAAMQRGALPTNVPTPRGLLGDAPNDPRGGTLMTVTGD
VEPRAYLGPPPPHQGPPMHHVPGHEGRGPPPHDMRGGPLAEPRPLMAEPRGPMLDQRGPP
LDARGGRDPRGLDARGMEARAMEARGLDARGLEARAMEARAMEARAMEARAMEARAMEAR
AMEARGMDTRGPVPGPRGPMPSGIQGPNPMNMGAVVPQGSRQVPVMQGAGMQGASMQGGS
QPGGFSPGQSQVTPQDHEKAALIMQVLQLTADQIAMLPPEQRQSILILKEQIQKSTGAP
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtttgcctgtgagagatcctgcggtggatcgttccctgcgctccgtcttcgtg
ggaaacatcccttatgaagctactgaagaacaactgaaggacatcttctctgaggttggg
cctgtcgttagtttcagattggtatacgatagggagacaggaaaaccaaagggctatggc
ttctgcgaataccaagaccaagagacagcacttagtgccatgcgaaacttgaatgggcgt
gaattcagtgggagagcacttcgagtggataatgctgccagtgaaaagaacaaggaggaa
ctgaagagccttggcactggtgcacctgtcatcgagtcaccttatggagaaagcatcagc
cctgaggatgcccctgaatccattagcaaagcagttgccagccttccaccagaacagatg
tttgagttgatgaaacaaatgaagctctgtgtccagaatagtccccaggaagcacgaaac
atgttgcttcagaatccacagctggcttatgctttgctgcaagcacaggtagtgatgaga
attgtggatcctgagattgccctgaaaattctgcatcgccagacaaatatcccaacgctg
atttcaggcaaccctcagccagttcatgttgctgggcctggctcaggacccaatgtttca
atgaaccagcagaatcctcaggcccctcaggctcaatctttgggtggaatgcatgtcaat
ggcgcacctcctatgatgcaagcttctatgccaggtggagttccagccccagtgcagatg
gcagctgctgtagcaggacctggccctggttccttagcccctgcaggagtcatgcaagcc
caagttggaatgcaaggagctggaccagtgcccatggaacgaggacaaggaaccttacag
cactcgcccgtgggacccgccgggcctgcatcaattgagcgagttcaagtgccaatgcaa
gaccccagagcagctatgcagcggggagccttgcctaccaacgtcccaactcctcgtggt
cttttaggtgatgctcccaatgacccgcggggaggcactttaatgactgtaactggagac
gtagaacctagagcttacctgggaccaccaccacctcatcagggcccgcccatgcaccat
gttcctggtcatgaaggtcgtggaccgcctccacatgacatgaggggaggacccttagct
gagccaagacctttaatggcagaaccaagaggacccatgctagatcagaggggcccacct
ctggatgccagaggtggaagagatccccgaggattagatgcacgggggatggaagccaga
gccatggaagcaagaggactagatgccagaggactggaagctcgtgccatggaagcccgt
gccatggaagcccgtgccatggaggcccgtgccatggaggcccgtgccatggaggcgcgt
gccatggaggccagaggcatggacaccagaggcccagtacctggacctagaggacctatg
cctagtggaatccaaggtcccaatccaatgaacatgggggcagttgttccccagggatcc
agacaggtaccagtcatgcagggagcaggcatgcaaggagcaagcatgcaaggtggaagc
caacctggtggctttagtcctggacagagccaagtcacaccccaggatcatgagaaggct
gctttgattatgcaggtccttcaacttactgcagaccagattgccatgctgcctcctgag
caaagacagagtatcctaatcttaaaggaacagatacagaaatccactggggcaccttga
DBGET
integrated database retrieval system
