Mus pahari (shrew mouse): 110313293
Help
Entry
110313293 CDS
T05929
Symbol
Mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110313293 (Mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110313293 (Mid1)
Enzymes [BR:
mpah01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110313293 (Mid1)
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110313293 (Mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
F36G3_coil
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
TRIM_CC
zf-RING_2
zf-C3HC4_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
110313293
NCBI-ProteinID:
XP_021042975
LinkDB
All DBs
Position
X:147521735..147865260
Genome browser
AA seq
680 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCATNEPVESINAFQCPTCR
HVITLSQRGLDGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERAFDTNTMSSAEKVLCQ
FCDQDPAQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPIPDSHIRGLMCLEHED
EKVNMYCVTDDQLICALCKLVGRHRDHQVAALSERYDKLKQNLESNLTNLIKRNTELETL
LAKLIQTCQHVEVNASRQEAKLTEECDLLIEIIQQRRQIIGTKIKEGKVIRLRKLAQQIA
NCKQCIERSASLISQAEHSLKENDHARFLQTAKNITERVSMATASSQVLIPEINLNDTFD
TFALDFSREKKLLECLDYLTAPNPPTIREELCTASYDTITVHWTSDDEFSVVSYELQYTI
FTGQANVVNIAYDCTCLIGFAGLCNSADSWMIVPNIKQNHYTVHGLQSGTKYIFMVKAIN
QAGSRSSEPGKLKTNSQPFKLDPKSAHRKLKVSHDNLTVERDESSSKKSHTPERFTSQGS
YGVAGNVFIDSGRHYWEVVISGSTWYAIGLAYKSAPKHEWIGKNSASWALCRCNNNWVVR
HNSKEIPIEPAPHLRRVGILLDYDNGSIAFYDALNSIHLYTFDVALAQPVCPTFTVWNKC
LTIITGLPIPDHLDCTEQLP
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgtcctatttgtctggagctttttgaggaccct
ctcctgcttccctgcgcacatagcctctgcttcaactgtgcccaccgcatcctggtctct
cactgtgccaccaacgagcctgtggagtccatcaacgccttccagtgccccacctgccgg
catgtcatcacgctcagccagcgaggtctagacggtctcaagcgcaacgtcaccctacaa
aacatcattgacagatttcagaaagcatccgtgagcgggcccaattctcccagtgagacc
cgcagggagcgggcctttgacaccaacaccatgtcctctgccgagaaggttctctgccag
ttctgtgaccaggatcctgcccaggatgctgtgaagacctgtgttacttgcgaagtgtcc
tactgcgatgagtgcctgaaagccactcatccgaacaagaagccctttacaggccatcgt
ctgattgagccaatcccggactcgcacatccgggggctgatgtgcctggagcacgaggat
gagaaggtgaatatgtactgtgtgaccgatgaccagttaatctgtgccttgtgtaaactg
gttgggcggcaccgcgatcatcaggtggcagctttgagtgagcgctatgacaaattgaag
caaaacttggagagtaatctcaccaatcttattaaaagaaacacagaactggagactctt
ttggctaaactcatccaaacttgtcaacatgttgaagtcaatgcatcccgtcaagaagcc
aaactgacagaagaatgtgatcttctcattgaaattattcagcaaagaagacaaattatt
ggaacaaagattaaagaaggcaaggtgataaggctccgcaaactagctcagcagattgca
aactgtaaacagtgcattgaaaggtccgcatcactcatctcccaagcagaacactcgctg
aaggaaaatgaccatgcccgttttctacagacagcaaagaatatcactgagagagtctcc
atggcaacagcatcctcccaggtcctaattcctgaaatcaacctcaatgacacatttgac
acttttgccttagatttttcccgggagaagaaactgctagaatgtctggattacctaaca
gctcccaaccctcccacaattagagaagagctctgcacggcttcctatgacaccatcacc
gtccactggacttcagatgatgagttcagtgttgtctcctatgaactccagtacaccata
ttcactggacaagccaatgttgtaaacattgcctatgattgcacctgtcttattggcttt
gcaggtctatgtaactcggcggatagctggatgattgtgcccaacatcaagcagaaccac
tacactgtgcatggcctacaaagtggcaccaagtatatcttcatggtcaaggccatcaac
caggcaggcagccgtagcagtgagcctgggaagctgaagacaaacagtcagccatttaaa
ctggatcccaaatctgctcatcgaaaactaaaggtgtcccatgacaacctgactgttgaa
cgtgatgaatcatcatccaaaaagagtcacacacctgaacgcttcactagtcaagggagc
tatggagtggccggaaatgtgttcattgatagtggccgtcattactgggaagtggtcata
agtggaagtacatggtacgccattggccttgcatacaagtcggctccaaaacatgaatgg
attgggaagaattctgcttcctgggccctctgccgctgcaacaataactgggtggtgagg
cataacagcaaggaaatccccatcgagccagcccctcacctcaggcgtgtaggcatcttg
ctggactatgataatggctcaatcgctttttatgatgctttgaactccatccacctctac
acctttgatgtggcgcttgcgcagcctgtgtgccccacctttactgtgtggaacaagtgt
ttgacgattataactggtcttcccatcccagaccatttggactgtacagaacagctacct
tga
DBGET
integrated database retrieval system
