Mus pahari (shrew mouse): 110313304
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Entry
110313304 CDS
T05929
Symbol
Fmr1
Name
(RefSeq) synaptic functional regulator FMR1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110313304 (Fmr1)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110313304 (Fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
110313304 (Fmr1)
mRNA cycle factors
Stress granule specific factors
110313304 (Fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXMR_C2
KH_1
Agenet
Motif
Other DBs
NCBI-GeneID:
110313304
NCBI-ProteinID:
XP_021042995
Ensembl:
MGP_PahariEiJ_G0031663
LinkDB
All DBs
Position
X:57774228..57811229
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AA seq
614 aa
AA seq
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MEELVVEVRGSNGAFYKAFVKDVHEDSITVAFENNWQPERQIPFHDVRFPPPVGYNKDIN
ESDEVEVYSRANEKEPCCWWLAKVRMIKGEFYVIEYAACDATYNEIVTIERLRSVNPNKP
ATKDTFHKIKLEVPEDLRQMCAKESAHKDFKKAVGAFSVTYDPENYQLVILSINEVTSKR
AHMLIDMHFRSLRTKLSLILRNEEASKQLESSRQLASRFHEQFIVREDLMGLAIGTHGAN
IQQARKVPGVTAIDLDEDTCTFHIYGEDQDAVKKARSFLEFAEDVIQVPRNLVGKVIGKN
GKLIQEIVDKSGVVRVRIEAENEKSVPQEEEIMPPSSLPSNNSRVGPNSSEEKKHLDTKE
NTHFSQSNSTKVQRVLVVSSIVAGGPQKPEPKAWQGMVPFVFVGTKDSIANATVLLDYHL
NYLKEVDQLRLERLQIDEQLRQIGASSRPPPNRTDKEKGYVTDDGQGMGRGSRPYRNRGH
GRRGPGYTSGTNSEASNASETESDHRDELSDWSLAPTEEERESFLRRGDGRRRGGGGRGQ
GGRGRGGGFKGNDDHSRTDNRPRNPREAKGRTADGSLQSASSEGSRLRTGKDRNQKKEKP
DSIDGLQPLVNGVP
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggtggtggaagtgcgaggctccaatggcgctttctacaaggcatttgta
aaagatgtccatgaagattctataacagttgcttttgaaaacaactggcaaccagagaga
cagattccattccatgatgtgagattcccaccacctgtaggttataataaagatataaac
gaaagtgatgaagttgaggtttattccagagcaaatgaaaaagagccttgctgttggtgg
ttagctaaagtgaggatgataaagggtgagttttatgtgatagaatatgcagcatgtgat
gctacatataatgaaattgtcacaattgagcgtctacgatctgttaatcccaacaaacct
gctacaaaagatactttccataaaatcaagctggaggtgccagaagatttacgacagatg
tgtgccaaagaatcagcacataaggattttaaaaaggcagttggtgccttctctgtaact
tatgatccagaaaattatcagctggttattttgtccatcaatgaagtcacctcaaagcga
gcccacatgttgattgacatgcactttcgaagtctgcgcaccaagttgtctcttatactg
agaaatgaagaagccagtaaacaattggagagttcaaggcagcttgcctcaagatttcat
gaacagtttatcgtacgagaagatctgatgggtctagctattggtactcatggtgctaat
attcagcaagctagaaaagtacctggcgtcactgctattgatttagatgaggatacctgc
acatttcatatttatggagaggatcaagatgcagtgaaaaaggctagaagctttctggaa
tttgctgaagatgtcatacaggttccacgaaacttagtaggcaaagtaataggaaaaaat
ggaaagctgattcaagagatcgtggacaagtcaggagttgtgagggtgaggattgaggct
gaaaatgagaaaagtgtcccacaagaagaggaaattatgccaccaagttccctaccttcc
aataattcaagggttggacctaattcctcggaagaaaagaagcatttagatacaaaggaa
aacacccatttttctcaatctaacagtacaaaagtccagagggtgttagtggtttcatca
attgtagcagggggaccccagaaacctgaacccaaggcttggcagggtatggtaccattt
gtttttgtgggaacaaaagacagcatcgctaatgccactgttcttttggattatcacctg
aactatttaaaggaagtagaccagttgcgtttggagagattacaaattgatgagcagttg
cgacaaattggagctagttctagaccaccaccaaatcgtacagataaggaaaaaggctat
gtgactgatgatggtcaaggaatgggtcgaggtagtagaccttacagaaatagggggcac
ggcagacgcggtcctggatatacttcaggaactaattctgaagcatcaaatgcttctgaa
acagaatctgaccacagagacgaactcagtgattggtcattagctccaacagaggaagag
agggagagcttcctgcgcagaggagacggacggcggcgtggaggaggaggaagaggacaa
ggaggaagaggaagaggaggaggcttcaaaggaaacgacgatcattcccgaacagataat
cgtccacgtaatccaagagaggctaaaggaagaacagctgatggatccctgcagagtgcc
tccagtgaagggagccggctgcgcacgggtaaagatcgtaaccagaagaaggaaaagcca
gacagcatagatgggctgcaaccgctggtgaatggagtaccctaa
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