Mus pahari (shrew mouse): 110313446
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Entry
110313446 CDS
T05929
Symbol
L1cam
Name
(RefSeq) neural cell adhesion molecule L1 isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04360
Axon guidance
mpah04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110313446 (L1cam)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
110313446 (L1cam)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mpah04515
]
110313446 (L1cam)
04090 CD molecules [BR:
mpah04090
]
110313446 (L1cam)
04091 Lectins [BR:
mpah04091
]
110313446 (L1cam)
Cell adhesion molecules [BR:
mpah04515
]
Immunoglobulin superfamily
L1 family
110313446 (L1cam)
CD molecules [BR:
mpah04090
]
Proteins
110313446 (L1cam)
Lectins [BR:
mpah04091
]
I-type lectins (Siglecs)
110313446 (L1cam)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
ig
Ig_2
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_5
Pur_ac_phosph_N
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
110313446
NCBI-ProteinID:
XP_021043332
Ensembl:
MGP_PahariEiJ_G0031706
LinkDB
All DBs
Position
X:complement(62458316..62485290)
Genome browser
AA seq
1259 aa
AA seq
DB search
MVVMLRYVWPLLLCSPCLLIQIPDEYKGHHVLEPPVITEQSPRRLVVFPTDDISLKCEAR
GRPQVEFRWTKDGIHFKPKEELGVVVHEAPYSGSFTIEGNNSFAQRFQGIYRCYASNKLG
TAMSHEIQLVAEGAPKWPKETVKPVEVEEGESVVLPCNPPPSAAPLRIYWMNSKILHIKQ
DERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTIIQKEPIDLRVKPTNSMIDRKPR
LLFPTNSSSHLVALQGQSLILECIAEGFPTPTIKWLHPSDPMPTDRVIYQNHNKTLQLLN
VGEEDDGEYTCLAENSLGSARHVYYVTVEAAPYWLQKPQSHLYGPGETARLDCQVQGRPQ
PEITWRINGMSMEKVNKDQKYRIEQGSLILSNVQPSDTMVTQCEARNQHGLLLANAYIYV
VQLPARILTKDNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQDERFFPYANGT
LSIRDLQANDTGRYFCQAANDQNNVTILANLQVKEATQITQGPRSAIEKKGARVTFTCQA
SFDPSLQASITWRGDGRDLQERGDSDKYFIEDGQLVIQSLDYSDQGNYSCVASTELDEVE
SRAQLLVVGSPGPVPYLELSDRHLLKQSQVHLSWSPAEDHNSPIEKYDIEFEDKEMAPEK
WFSLGKVPGNQTSTTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTPEAAPEKNPVDV
RGEGNETNNMVITWKPLRWMDWNAPQIQYRVQWRPQGKQETWREQTVSDPFLVVSNTSTF
VPYEIKVQAVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVLVRWRPVDLAQV
KGHLRGYNVTYWWKGSQRKHSKRHVHKSHIVVPANTTSAILSGLRPYSSYHVEVQAFNGR
GLGPASEWTFSTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYLLSYHPLAGE
SKEQLFFNLSDPELRTHNLTNLNPDLQYRFQLQATTQQGPGEAIVREGGTMALFGKPDFG
NISATAGENYSVVSWVPQEGQCNFRFHILFKALPEGKVSPDHQPQPQDVSYNQSSYTQWN
LQPDTKYEIHLMKEKVLLHHLAVKTNGTGPVQVSTTGSFASEGWFIAFVSAIILLLLILL
ILCFIKRSKGGKYSVKDKEDTQVDSEARPMKDETFGEYRSLESDNEEKAFGSSQPSLNGD
IKPLGSDDSLADYGGSVDVQFNEDGSFIGQYSGKKEKEAAGGNDSSGATSPINPAVALE
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggtcgttatgctgcggtatgtgtggcctctcctcctctgcagcccctgcctgctcata
cagattcctgatgaatataaaggacaccatgtgctagagccacctgtcatcacagaacag
tctccacggcgcctggttgtcttcccaacagatgacataagcctgaaatgtgaagccaga
ggcagaccccaagtggagttccgctggacgaaagatggcatccacttcaaacccaaggaa
gaattgggtgtagtggtgcatgaggcaccctattctggctccttcaccatcgaaggcaac
aacagctttgcccagaggtttcagggcatctatcgctgctatgccagcaataagctagga
actgccatgtcgcatgagatccagctcgtggccgagggtgcccccaagtggccgaaggag
actgtaaaacctgtggaagtggaggaaggagaatcagtagttctgccttgcaaccctcca
cccagtgcagccccacttaggatctactggatgaacagcaagattttgcacatcaaacaa
gatgagcgggtgtccatgggccagaatggagacctatattttgccaatgtgcttacctcg
gacaatcattcagactacatctgcaatgcccacttccctggtacccggaccatcattcaa
aaggaacctattgacctccgggtcaagcccaccaacagcatgattgaccggaagccacgt
ctgctctttcccacaaactccagcagccacctggtagccttgcagggccagtcattgatc
ctggagtgcattgctgagggattccctacacccaccattaagtggctgcaccccagtgac
ccgatgccaacagaccgtgttatctaccaaaaccacaacaagaccctgcaactactcaat
gtgggcgaagaggacgatggcgagtatacttgccttgctgagaactcgctgggcagtgcc
cggcatgtctactatgttactgtggaagctgccccatactggctgcagaagccccagagc
catttgtatggtccaggagagactgcccgcctagactgccaagtccagggcaggccccaa
ccagagatcacttggagaatcaacggaatgtctatggagaaggtgaacaaggaccagaag
taccggattgagcaggggtctctgatcttgagtaatgtgcagccaagtgacacaatggtg
acccagtgtgaagcccgcaaccagcatgggctcctgctagccaatgcctacatttatgtt
gtccagctgccagccaggatcctaacaaaagacaatcagacatacatggcagttgagggc
agtactgcttacttgctatgcaaagcctttggagctcccgttcccagtgtccagtggctg
gatgaagaaggaaccacagtgcttcaggatgaacgatttttcccctatgccaatggaacg
ctgagcatcagagacctccaggccaatgacactggacgctatttctgccaggctgccaat
gaccagaacaatgtgaccattttggctaacctacaggttaaagaagcaacccagatcaca
caggggccccggagcgcaattgagaagaaaggtgcaagggtgacattcacgtgccaggcc
tcctttgacccctctctgcaggccagcatcacttggcgtggagatgggagagacctccag
gaacgtggggacagtgacaagtatttcatagaagatggacaactggtcatccagagcctg
gactacagtgaccagggcaactacagttgtgtggccagcactgaattggatgaggtggag
agcagggcacagctcttagtggtgggaagccctgggccagtgccttacctggagctgtcc
gaccgccacctgctgaagcagagccaggtgcacttgtcttggagccctgctgaagaccac
aactctcccattgagaaatatgacattgaatttgaggacaaggaaatggctcctgagaaa
tggttcagtctgggcaaggtgccaggaaatcagacctctactaccctcaagctgtccccc
tatgtccactacacctttcgggtcactgccattaacaaatatggtcctggagaacccagc
cctgtctctgagactgtagtcacacctgaggcagctccagagaagaaccctgtggatgtg
agaggggaagggaatgagaccaacaatatggtcatcacatggaagccccttcggtggatg
gattggaatgccccccagattcagtaccgtgtacagtggcgtccacagggcaagcaggag
acctggagggaacagaccgtgagcgaccctttcctggtggtgtctaatacttccacattt
gtgccttatgagatcaaagtccaggcagtgaacaaccagggcaagggccctgagccccag
gtcaccattggctattcaggggaagactacccccaggtgagccctgaacttgaagacatc
acaatcttcaactcaagtactgtgcttgtcaggtggaggcctgtggacttggcccaggtt
aagggccacctcaggggatacaatgtaacatactggtggaagggcagccagagaaagcac
agcaagaggcatgtccacaaaagccacatagtggtacctgcaaacaccaccagtgccatc
ctcagtggtttgcgtccttacagctcttaccatgtggaggtacaggcctttaatgggcgg
ggcttggggcctgcaagtgaatggaccttcagcaccccagagggagtgcctggccaccct
gaggcattacacctggagtgtcagtcggacactagcctgctactgcactggcagccacca
ctcagccacaatggagtgctcactggctacctgctctcttaccatcccttggctggggaa
agcaaagagcagctgttcttcaacctttcggacccagaactccggactcataatctgacc
aacctcaaccctgatctgcagtaccgtttccagcttcaggccaccacccaacagggtcct
ggtgaggctatcgtgcgtgaaggaggcaccatggccctgtttggcaagccagattttggc
aacatctcagccacagcaggtgaaaactacagtgtggtctcctgggtccctcaggagggc
cagtgcaatttcaggttccatatcttgttcaaagccttgccagaagggaaagtgagccct
gatcaccagcctcagcctcaggatgtcagctacaatcagagctcctacacacaatggaac
ctacagcctgacaccaaatatgagatccacctgatgaaggagaaggtcctcctgcaccat
ctggctgtgaagactaatggcactggccccgtgcaagtttctactacaggtagctttgcc
tccgagggctggttcattgcctttgtcagcgctatcattctcttgctcctcatcctgctc
atcctctgcttcatcaaacgcagcaagggtggcaaatactcagtgaaggacaaggaggac
actcaggtagattccgaggcccggcccatgaaagacgagaccttcggcgagtacaggtcc
ctggagagtgacaatgaagagaaggcctttggcagcagccagccatctctcaatggagac
atcaaacccctaggcagtgatgacagcctggctgattatgggggcagtgtggacgtccag
ttcaatgaggatggctccttcatcggccagtacagtggcaaaaaagagaaggaggcagca
ggaggcaatgacagttcaggggctacctctcctatcaatcctgcagtagccctagaatag
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integrated database retrieval system
