KEGG   Mus pahari (shrew mouse): 110313493
Entry
110313493         CDS       T05929                                 
Symbol
Cul4b
Name
(RefSeq) cullin-4B
  KO
K10609  cullin 4
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03420  Nucleotide excision repair
mpah04120  Ubiquitin mediated proteolysis
mpah05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    110313493 (Cul4b)
  09124 Replication and repair
   03420 Nucleotide excision repair
    110313493 (Cul4b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    110313493 (Cul4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mpah04121]
    110313493 (Cul4b)
   03400 DNA repair and recombination proteins [BR:mpah03400]
    110313493 (Cul4b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mpah04147]
    110313493 (Cul4b)
Ubiquitin system [BR:mpah04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     110313493 (Cul4b)
DNA repair and recombination proteins [BR:mpah03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      110313493 (Cul4b)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      110313493 (Cul4b)
Exosome [BR:mpah04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   110313493 (Cul4b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 110313493
NCBI-ProteinID: XP_021043468
LinkDB
Position
X:complement(30235392..30337275)
AA seq 975 aa
MSRSTRSRERRENDSNSDDNSSETSNQERRRCRQGPPRPPYPPLLPPVFPPPPPPPQVRR
TRGLQDLGAMKSVCPGTSGFSSPNPSAASAAAQEVRSAADGNTSTTPPTSAKKRKLNSSS
SSSSSSSSSNSSNEREDFDSTSSSSTPPQPRDSASPSTSAFCLGVPVATSSHVPIQKKLR
FEDTLEFVGIDTKMAEESSSSSSSSSPTAATSQQQQQQLKTKSILISSVASVHHANGLAK
SSTAVSSFANSKPGSAKKLVIKNFKDKPKLPENYTDETWQKLKEAVEAIQNSTSIKYNLE
ELYQAVENLCSYKISANLYKQLRQICEDHIKAQIHQFREDSLDSVLFLKKIDRCWQNHCR
QMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRAHIISDQKVQTKTIDGILLLIERER
NGEAIDRSLLRSLLSMLSDLQIYQDSFEQQFLQETNRLYAAEGQKLMQEREVPEYLHHVN
KRLEEEADRLITYLDQTTQKSLIASVEKQLLGEHLTAILQKGLNSLLDENRIQDLCLLYQ
LFSRVRGGVQVLLQQWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDTCFLKNE
KFINAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIFRFIY
GKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDI
MIQFKQYMQNQNVPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLGKHSG
RKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEEIKHATGIEDGEL
RRTLQSLACGKARVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQAST
TERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDY
MERDKENPNQYNYIA
NT seq 2928 nt   +upstreamnt  +downstreamnt
atgtcacgttcaactaggtctagagaaagaagagagaatgactccaactcagacgataac
agttcggaaacctccaatcaagagcgccgaaggtgtcgccaaggtccgccccgccctccc
tatccacctcttttaccccctgtgttccctcccccaccccccccacctcaagtccggcgg
acccgggggctccaggatctgggagctatgaaaagtgtctgcccaggcacttccggtttt
tcttcccccaatccctctgctgcttctgctgctgctcaggaggtcagatctgccgctgat
ggtaataccagcaccactccgcccacctctgccaagaagagaaagttaaacagcagcagc
agcagcagtagcagcagcagcagcagtaacagtagtaacgagagagaagactttgattcc
acctcttcctcttccacccctccacaacccagagattcggcgtccccttcaacctcggcc
ttctgcctcggggttccagtggccacttccagccacgtacctatacagaagaagctgcgg
tttgaagacaccctggagtttgtagggattgatacgaaaatggctgaggaatcttcttcc
tcatcttcctcatcttcgccaactgctgcaacctcacagcagcagcagcagcaacttaaa
actaagagtatattaatttcttctgtggcttcagtgcaccatgcaaacggcctggctaaa
tcttctaccgcggtctctagctttgctaacagcaagcccggctcagctaagaagttagtg
atcaagaactttaaagataagcctaaattaccagaaaactatacagatgagacatggcaa
aagctaaaagaagcagtggaagccattcagaatagtacttcaattaagtacaatttagaa
gaactctaccaggctgtagaaaatctatgttcttataagatttctgcaaatttgtataag
caactgaggcagatatgtgaagatcacatcaaagcacagattcatcagttcagagaggat
tcattggatagtgttctttttctcaaaaagatcgatagatgctggcaaaaccactgtagg
caaatgataatgatcaggagtatttttttgtttctggatagaacttatgttcttcagaat
tcaatgctaccctccatttgggacatgggattagagttatttagggctcatattataagt
gatcaaaaagtacagacaaaaacaattgatggcatccttctgttgattgagagagaacgg
aatggtgaagcaattgatagaagtttacttcgaagccttttaagtatgctctctgatttg
caaatttaccaagattcttttgaacagcaatttttgcaagaaactaatcggctttacgca
gccgaaggtcagaagttaatgcaggagagagaggttcctgagtatcttcatcatgttaat
aaacgcctagaagaagaagctgacagacttattacttacttagatcagaccacccagaaa
tcactaattgcttctgttgaaaaacaacttctaggtgaacacttaacagcaattcttcag
aaaggtttaaatagcctccttgatgaaaaccgaattcaagatttgtgtctcctgtatcag
ctcttcagtagagttcgcgggggcgttcaggttctcttgcagcagtggattgagtatatc
aaggcttttggaagtaccattgttattaatcctgaaaaagataaaactatggttcaagaa
ttattagactttaaagataaagttgaccatataattgatacctgctttctgaaaaatgaa
aaatttatcaatgccatgaaagaagcatttgaaacattcattaataaaagaccaaataag
ccagctgaactaatagctaagtatgtggattcaaaacttcgtgcgggcaacaaggaagct
acagatgaagagcttgagaaaatgttggataaaataatgattatattcagatttatctat
ggtaaagatgtttttgaggccttctataagaaagatttagccaaacgcctattagttggc
aagagtgcatcagtagatgctgaaaaatcaatgctgtccaaactgaaacacgaatgtgga
gctgcttttaccagcaagcttgaaggaatgttcaaagacatggagctttctaaagatatc
atgattcagtttaaacagtatatgcagaaccagaatgtacccggcaatattgaactaact
gttaatatcctgacaatgggttactggccaacatatgtgcctatggaagtccatttgcca
ccagagatggtgaagcttcaggaaattttcaagacattttacttaggcaagcacagtggc
aggaaactccagtggcagtcaaccctgggacactgtgtgctaaaagctgaatttaaagag
ggcaaaaaagaacttcaggtctctctttttcaaaccctggtgctgctaatgtttaatgaa
ggagaagagttcagtttagaagagatcaagcatgctactgggatagaggatggagaatta
agaagaacactgcagtcactagcctgtggcaaagctagagttctggctaaaaatccgaag
ggcaaagatatcgaagatggtgacaaattcatttgtaatgatgatttcaaacacaaacta
ttcaggataaagatcaatcaaatccagatgaaagaaacggttgaagaacaagcaagcact
acagaaagagtatttcaagatagacagtaccaaattgatgctgcgatcgtccgaattatg
aagatgagaaaaacacttagccacaatcttcttgtttcagaagtctacaatcagctaaaa
tttccagttaaacctgctgatcttaagaagagaatagaatccctcattgaccgggattac
atggaaagagataaagaaaacccaaatcagtacaactatattgcatag

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