Mus pahari (shrew mouse): 110313730
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Entry
110313730 CDS
T05929
Symbol
Nyx
Name
(RefSeq) nyctalopin
KO
K08129
nyctalopin
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mpah00535
]
110313730 (Nyx)
Proteoglycans [BR:
mpah00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
110313730 (Nyx)
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRRNT
DUF5928
Asparaginase_2
Motif
Other DBs
NCBI-GeneID:
110313730
NCBI-ProteinID:
XP_021043818
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Position
X:6612096..6624111
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AA seq
541 aa
AA seq
DB search
MGLWKDISKLNYNICVRLLLKTLTRTGQMAQWIKVLASKPDHEEEGGRAFWEAIGHKGGA
LKPGVVVIVLRHAVVFSLPCTGATEACLRACPAACICSTVERGCSVRCDRAGLQRVPQEF
PCEAASIDLDRNGLRILGERAFGTLPSLRRLSLRHNNLSFITPGAFKGLPRLAELRLAHN
GELRYLHVRTFAALGRLRRLDLAACRLFSVPERLLAELPALRELTAIDNLFRRVPGALRG
LANLTHAHFERSRIEAVASGSLLGMRRLRSLSLQANRVRAVHAGAFGDCGALEDLLLNDN
LLAALPAAAFRGLRRLRTLNLGGNALASVARAWFSDLAELELLYLDRNSIAFVEEGAFQN
LSGLLALHLNGNQLTVLSWAAFQPGFFLGRLFLFRNPWRCDCQLEWLRDWMEGSGRVADV
ACASPGSVAGQDLSRVVFERSSDGLCVDPDELNFTTSSPGPSPEPVATTVSRFSSLLSKL
LAPRVPVEEIANTTWELVNVSLNDSFRSHAVMVFCYKATFLFTSCLLLSLAQYVVLGLQR
D
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgggcctttggaaagacatatcaaagctaaactataacatctgtgttaggctgctgctt
aagactcttaccaggactggtcagatggctcagtggataaaggtgttggcctccaagcct
gaccatgaggaggagggaggcagggccttctgggaggcaataggtcacaaaggaggagct
ctcaagcccggggttgttgttattgttttgagacatgcggtggtcttcagtctgccctgc
accggggccaccgaggcctgtctgcgggcctgccctgcggcctgcatctgcagcaccgtg
gagcggggctgctctgtgcgctgtgaccgtgcgggcctccagcgggtaccccaggagttt
ccgtgcgaggcggcctccatcgatctggaccggaatggcctgcgcatcctgggcgagcgg
gcctttggcacgctgccatccttgcgccgcctgtcgctgcgccacaacaacctgtccttc
atcacgcccggcgccttcaaggggctgccgcggctggccgagctgcgcctggcgcacaac
ggcgagctgcgctatctgcacgtgcggaccttcgcggcgctgggccgcctccgccgcctg
gacctggcggcctgccgcctcttcagcgtccccgagcgtctcctggccgagctgccggcc
ctgcgcgagctcacggccatcgacaacctcttccgccgggtgcccggtgcgctccggggc
ctcgccaacctgacgcacgcgcacttcgagcgcagccgcatcgaagccgtggcctcgggc
tcgctgctgggcatgcgccgtctgcgctcgctcagcctgcaggccaaccgcgtgcgcgcg
gtgcacgccggggccttcggcgactgtggcgccctggaggacctgctgctcaacgacaac
ctgctggccgcgctgcccgccgccgccttccgcggccttcgccgcctgcgcaccctcaat
ctgggcggcaacgcgctggcaagcgtggcacgcgcctggttctctgacctggccgagctc
gagctgctctacctggatcgcaacagcatcgcctttgtcgaggaaggcgccttccagaac
ctctcgggcctcctggccctgcatctcaatggcaaccagctcaccgtgctctcctgggct
gctttccagccaggtttcttcctgggccgcctcttccttttccgcaatccttggcgctgc
gactgccagctggagtggctgcgggattggatggagggctccgggcgtgtggctgatgtg
gcgtgcgcctccccaggctctgtggccggccaggacctcagccgggtggtctttgagcgc
tcctctgatggcctctgtgtggaccccgatgagctgaactttaccacgtccagtcctggc
ccgagtccagagccagtggccaccactgtgagcaggttcagcagcctcctgtccaagctg
ctggccccaagggtccctgtggaggagatagccaataccacctgggagctggtcaacgtt
tcgttgaatgacagctttcggtcccatgcagtgatggtcttctgctacaaagccacgttt
ctcttcacctcttgcctcttgctcagcctggcccagtatgtggtgttgggcctgcagagg
gactga
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