Mus pahari (shrew mouse): 110313744
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Entry
110313744 CDS
T05929
Symbol
Dctn1
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04814
Motor proteins
mpah04962
Vasopressin-regulated water reabsorption
mpah05014
Amyotrophic lateral sclerosis
mpah05016
Huntington disease
mpah05022
Pathways of neurodegeneration - multiple diseases
mpah05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
110313744 (Dctn1)
09150 Organismal Systems
09155 Excretory system
04962 Vasopressin-regulated water reabsorption
110313744 (Dctn1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110313744 (Dctn1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110313744 (Dctn1)
05016 Huntington disease
110313744 (Dctn1)
05022 Pathways of neurodegeneration - multiple diseases
110313744 (Dctn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110313744 (Dctn1)
03036 Chromosome and associated proteins [BR:
mpah03036
]
110313744 (Dctn1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mpah04812
]
110313744 (Dctn1)
Membrane trafficking [BR:
mpah04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
110313744 (Dctn1)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
110313744 (Dctn1)
Cytoskeleton proteins [BR:
mpah04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
110313744 (Dctn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
110313744
NCBI-ProteinID:
XP_021043831
Ensembl:
MGP_PahariEiJ_G0022286
LinkDB
All DBs
Position
2:100215418..100250401
Genome browser
AA seq
1281 aa
AA seq
DB search
MAQSKRHMYNRTPSGSRMSTEASARPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGV
ILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQVFEDGADTTSPETPDSSASKVLKRE
GADAAAKTSKLRGLKPKKAPTARKTTTRRPKPTRPASTGVAGPSSSLGPSGSASAGELSS
SEPSTPAQTPLAAPIIPTPALTSPGAAPPLPSPSKEEEGLRAQVRDLEEKLETLRLKRSE
DKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADT
ADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQL
KQLEEQNARLKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVVRQQRERLQEELSQAE
STIDELKEQVDAALGAEEMVEMLTVRNLNLEEKVRELRETVGDLEAMNEMNDELQENARE
TELELREQLDMAGARVREAQKRVEAAQETVADYQQTIKKYRQLTAHLQDVNRELTNQQEA
SVERQQQPPPETFDFKIKFAETKAHAKAIEMELRQMEVAQANRHMSLLTAFMPDSFLRPG
GDHDCVLVLLLMPRLICKAELIRKQAQEKFDLSENCSERPGLRGAAGEQLSFAAGLVYSL
SLLQATLRRYEHALSQCNVDVYKKVGSLYPEMSAHERSLDFLIELLHKDQLDETVNVEPL
TKAIKYYQHLYSIHLAEQPEDSTMQLADHIKFTQSALDCMSVEVGRLRAFLQGGQEATDI
TLLLRDLETSCSDIRQFCKKIRRRMPGTDAPGIPAALAFGSQVSDTLLDCRKHLTWVVAV
LQEVAAAAAQLIAPLAENEGLPVAALEELAFKASEQIYGSPSSSPYECLRQSCTILISTM
NKLATAMQEGEYDAERPPSKPPPVELRAAALRAEITDAEGLGLKLEDRETVIKELKKSLK
IKGEELSEANVRLSLLEKKLDSAAKDADERIEKVQTRLEETQSLLRKKEKDFEETMDALQ
ADIDQLEAEKAELKQRLNSQSKRTVEGLRGPPPSGIATLVSGIAGEEQQRGGAPGQAPGA
LPGPGLVKDSPLLLQQISAMRLHISQLQHENSILRGAQMKASLAALPPLHVAKLSLPPHE
GPSGNLVTGALYRKTSQLLEKLNQLSTHTHVVDITRSSPAAKSPSAQLMEQVAQLKTLSD
TIEKLKDEVLKETVTQRPGATVPTDFATFPSSAFLRAKEEQQDDTVYMGKVTFSCAAGLG
QRHRLVLTQEQLHQLHSRLIS
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggcccagagcaagaggcacatgtacaaccggacaccaagtggcagcaggatgagtacg
gaggcaagcgcccggcccctgcgggttggctcccgcgtggaagtgattgggaagggccac
cgaggcactgtggcctatgttggagccacactctttgccactggcaaatgggtgggtgta
atcctggatgaagcaaaaggcaaaaatgatggcactgtccagggaaggaagtatttcacg
tgtgatgaaggccacggcatctttgtacgccaatcccagatacaagtgtttgaagatgga
gcagatactacttccccagagactcctgattcttctgcttccaaggtcctcaagagagag
ggagctgatgcagctgcaaagaccagcaaactgcggggactgaagcctaaaaaggcaccg
acagcccgaaagaccacaactcgacggcccaagcctactcgcccagccagcactggggtg
gctgggcccagtagctcccttggcccctctggctcagcgtctgccggggaactgagcagc
agtgagcccagcacaccagcccagactccgctggcagcacccatcatccccacaccggcc
ctcacctctcctggagcagcgcccccacttccttctccctctaaggaagaggaagggctg
agggcccaggtacgggacctggaggagaaactggagacactgcgcctaaaacgctcagaa
gacaaagcaaagctgaaagagctggagaagcataagatccagctggagcaggtgcaggaa
tggaagagcaaaatgcaggagcagcaggcagacctgcagcggcgcctcaaggaggctcgg
aaggaagccaaggaggcgctagaggcaaaggagcgctacatggaggagatggccgacacg
gccgacgctatagagatggccactctggacaaggagatggccgaagagcgcgctgagtct
ctacagcaagaggtggaggcactgaaggaacgggtggacgagctcaccacggacctggag
attctcaaggctgaaatcgaagagaaaggctctgatggggcggcatcaagctaccagctc
aagcagctagaggagcagaatgcccgcctgaaggacgccctggtgaggatgcgagacctc
tcttcctcagagaagcaggaacatgtgaagcttcagaaactcatggaaaagaagaaccag
gagctggaggttgtgaggcagcagcgtgagcgtcttcaggaggagctgagtcaggccgag
agcaccatagatgagctcaaagagcaggtggacgccgctctgggagctgaggagatggtg
gagatgctcactgtccggaacctgaatctagaggagaaagtgcgggaattacgggagact
gtgggcgacttggaagccatgaacgagatgaatgatgagctgcaggagaacgcacgcgag
acggagctggagctccgagagcagctggacatggcgggtgcccgagtgagggaggcacag
aagcgagtggaagccgcccaggagacggtcgcagactaccagcagaccatcaagaagtac
cgccagttgactgcccacctacaggatgtcaatcgggagctgacaaaccagcaggaagcg
tctgtggaaaggcagcagcagccgccgccagaaacttttgatttcaaaatcaagtttgct
gagaccaaggctcatgccaaggccattgagatggagttgagacagatggaggttgcccag
gccaaccggcacatgtccctgctgacagcctttatgcctgacagcttccttcggccaggt
ggagaccacgactgtgtcctggtgctgctgctcatgccccgactcatttgcaaggcagag
ctcatccggaagcaggcccaggagaagtttgacctgagtgagaactgttcagagcggccc
gggctgcgaggagctgccggggagcagctgagctttgctgctgggctggtgtactcgctg
agtctgctgcaggccacgctgcgccgctatgagcatgccctctctcagtgcaatgtggac
gtgtacaagaaggtcggcagcctgtaccccgagatgagcgcccacgagcgttccttagat
ttcctcattgagctgctgcacaaggatcagctggatgagactgtcaacgtggagcccctc
accaaggccatcaagtactaccagcatctgtacagcatccacctcgctgaacaacccgag
gactccaccatgcagctggctgaccacatcaagttcacccagagtgccctggattgcatg
agcgtggaggtgggccggctgcgtgccttcttacagggtgggcaggaggcaacagatatt
acccttcttctccgagacctggaaacatcatgcagtgacatccgtcagttctgcaagaag
atccgaaggcggatgccggggacggatgctcctgggatcccagcagcgctggcctttggc
tcacaggtatccgacacactcctcgactgcaggaagcacctgacatgggtggtagctgtt
ctgcaggaggtggcagctgcagccgcccagcttatcgcccccttggcagagaatgaggga
ttgcccgtggctgcactggaggagctggccttcaaagcaagcgagcagatctacgggagc
ccctccagcagcccctatgagtgtctacgccagtcatgcaccatcctcatcagcacgatg
aacaagctggccacagccatgcaagaaggcgagtatgacgcagagcgacccccgagcaag
cctcctccggttgaacttcgggctgcagccctgcgtgcagagatcactgatgctgaaggt
ctcggtttgaagcttgaggatcgagagacagttatcaaggagttaaagaagtcactcaag
attaagggagaggagctgagtgaggccaacgtgcggctgagcctcctggagaagaagctg
gacagcgctgccaaggatgcggacgagcgaatcgagaaggttcagacgcggctggaggag
actcagagcctgctgaggaagaaggaaaaagactttgaggagacaatggatgcgctccag
gctgacatcgatcagctggaggcagagaaggcagagctcaagcagcgcctgaacagccaa
tccaagcgcacagttgagggactccggggcccccctccgtcaggcatcgctaccctggtc
tctggcatcgctggtgaggaacaacagcgagggggcgctcctgggcaggctccgggcgcc
ttgccaggcccagggctggtgaaggactccccactgctgcttcagcagatctctgctatg
aggctacacatctctcagctccagcatgagaacagcatcctcagaggagcccagatgaag
gcgtccttggcggctctgccccctctgcatgttgcaaagctttccctcccaccccatgag
ggccccagtggtaacctagtgactggggcactgtaccgcaagaccagccagctcctggag
aaactaaaccagctgagcacccacacccacgtggtggatatcactaggagcagcccagct
gccaagagcccatcagctcagcttatggaacaagtggctcagctcaagaccctgagtgac
accattgagaagctcaaggatgaggttctcaaggagacagtgactcagcgccctggagcc
accgtgcccactgactttgccaccttcccttcatctgccttcctcagggccaaggaagag
cagcaagatgacacagtctacatgggcaaagtgaccttttcatgcgcggcaggcctagga
cagcgacaccgcctggtgctgacccaggagcagctgcaccagcttcacagtcgcctcatc
tcctaa
DBGET
integrated database retrieval system