Mus pahari (shrew mouse): 110313832
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Entry
110313832 CDS
T05929
Symbol
Bcor
Name
(RefSeq) BCL-6 corepressor isoform X1
KO
K23215
bcl-6 corepressor
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110313832 (Bcor)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpah03036
]
110313832 (Bcor)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
110313832 (Bcor)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCOR
PUFD
Ank_2
Ank
Ank_3
Ank_5
Ank_4
ANK_LRRK2
Peptidase_M57
Motif
Other DBs
NCBI-GeneID:
110313832
NCBI-ProteinID:
XP_021043902
Ensembl:
MGP_PahariEiJ_G0031482
LinkDB
All DBs
Position
X:complement(5231014..5353948)
Genome browser
AA seq
1758 aa
AA seq
DB search
MLSATPLYGNVHSWMNSERVRMCGTSEDRKIPMNDGDASKARLELREETPLNHNVVDTSG
AHRIDGLAALSMDRTGLIREGLRVPGNIVYSGLCGLGSEKGREATPSSLSGLGFSSERNP
EMQFKPNTPETVDASAVPGKPPNGFSAIYKTPPGVQKSAVAAAENLGLDRPASDKQSPLN
INGASYLRLPWVNPYMEGATPAIYPFLDSPNKYSLNMYKALLPQQSYGLAQPLYSPVCTS
GERFLYLPPPHYVNPHIPSSLASPMRLSTPSASAAIPPLVHCSDKSLPWKMGVNPGNPVD
SHTYPHIQNSKQSRVTSAKAVNSGLPGDTALLLPPSPRPSARVHLPTQPTAETYSEFHKH
YPRISTSPSVTLTKPYMTANSEFSTSRLSNGKYPKALDGGDCTQSMPGHTRKTTVQERKD
GGSPPLLEKQTVTKDVTDKPLDLSSKVVDADTSKADHMKKMAPTVLVHSRAASGLVLSGS
EIPKETLSPPGNGCSIYRSEIISTAPSSWVVPGPSPNEENNGKSLSLKNKALDWAIPQQR
SSSCPRMGGTDAVVTNVSGSVSSSGRPASASPAPNANADGTKTSRSSVDTTPSVIQHVGQ
PPSTPAKHSGSTSSKGTKASNPEPSFKASENGLPPTSIFLSPNEAFRSPPIPYPRSYLPY
PAPEGIALSPLSLHGKGPVYPHPVLLPNGSLFPGHLAPKPGLPYGLHTSRPEFVTYQDAL
GLGMVHPMLIPHTPIEITKEEKPERRSRSHERARYEDPTLRSRFSEMLEASSAKLHPEVP
TDKNLKPNSSWNQGKTGVKSDKLVYVDLLREEADAKADAGAPKAGLVAENVGQNTEATKP
SADPVIQQHREFISLREELGRITDFHESFTFKQASSQPVFSLGKDSGAAGTNKENLGVQV
ATPFLETALGSEGPAVTFGKTQEDPKPFCVGGAPPNMDVTPAYTKEGTDEAESNDGKVLK
PKPSKLAKRIANSAGYVGDRFKCVTTELYADSSQLSREQRALQMEGLQEDSILCLPAAYC
ERAMMRFSELEMKEREGSHPATKDSEVCKFSPADWERLKGNQEKKPKSVTLEETIADQND
SERCEYTSGNKHDLFEAPEDQDLPVEKYFLERPPVSEPPTDQGVVDTPHSPTLRLDRKRK
LSGDSTHTETAVEELAEDPLKAKRRRISKDDWPEREMTNSSSNHLEDPHCNELTNLKVCI
ELTGLHPKKQRHLLHLRERWEQQVSAAESKPGRQSRKEVAQAVQPEVTSQGTNITEEKPG
RKKAEAKGNRGWSEESLKSCDNEQGLPVLSGSPPMKSLSSTNASGKKQTQPSCTPASRLP
AKQQKIKESQKTDVLCTEEDEGCQAASPLQKYTDNIEKPSGKRLCKTKHLIPQESRRSLQ
ITGDYYVENTDTKMTVRRFRKRPEPSSDYDLSPPAKQEPKPFDRLQQLLPATQATQLPCS
NSPQETTQSRPMPPEARRLIVNKNAGETLLQRAARLGYEEVVLYCLENKVCDVNHRDNAG
YCALHEACARGWLNIVRHLLEYGADVNCSAQDGTRPLHDAVENDHLEIVRLLLSYGADPT
LATYSGRTIMKMTHSELMEKFLTDYLNDLQGRSEDDTSGAWEFYGSSVCEPDDESGYDVL
ANPPGPEDPDEEEETYSDLFEFEFAESSLLPCYNIQVSVAQGPRNWLLLSDVLKKLKMSS
RIFRSNFPNLEIVTIAETEFYRQVSTSLLFSCPKDLEAFNPESKELLDLVEFTNELQTLL
GSSVEWLHPSDTGHENYW
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atgctttctgcaacccctctgtatgggaacgttcacagctggatgaacagcgagagggtc
cgcatgtgtggaacaagtgaagacaggaaaattcctatgaatgatggcgacgcttcaaaa
gccaggctggagctgagggaggagactcccctgaatcacaacgtggtggacaccagtgga
gcccatcggatcgatggcctggcagcactgagcatggaccgcacaggcctcatccgggaa
gggctccgggtccctggaaacatcgtttattctggcttgtgtggattgggctcagaaaaa
ggtcgggaggctaccccaagctctctcagtggccttgggttttcttcggaaagaaatcca
gagatgcaattcaaaccgaatactcccgagacagtggacgcttctgctgtccctggaaaa
cccccaaatggcttcagtgctatatacaaaacaccacctggggtacaaaagagtgctgta
gctgcagcggaaaacttgggtttggataggcctgccagtgacaaacagagccctctcaac
atcaatggtgctagttacctgcggctgccctgggtcaacccttacatggagggggccact
ccagccatataccctttcctcgattcgccaaataagtattcactgaatatgtacaaggcc
ttgctacctcagcagtcctacggcttggcccagccactctattctcctgtctgcaccagt
ggggaacgtttcctctacctgccacccccacactatgtcaaccctcacatcccctcttcc
ttggcttcgcccatgaggctctccacaccttcagcctctgcggccattccacctcttgtc
cactgctcagacaaaagcctcccatggaagatgggcgtcaaccctgggaacccagttgat
tcccacacttacccccacatccaaaacagtaaacagtcccgggtgacctctgccaaggca
gtcaatagtggcctgccaggggacacagctctcctcttgcctccttcacctcggccctca
gcccgggtccaccttccaactcagcccactgcagagacctactctgaattccataagcac
tatcccaggatctccacctctccctcagtcaccctgacgaagccatacatgacagccaat
agcgagttctctacatccaggctgtccaatggcaagtaccccaaggctctagatggggga
gattgtactcaatccatgcctgggcacacccggaagacaacggttcaagaaagaaaagat
gggggctcaccacctctgttggaaaagcagaccgttaccaaagatgtcacagacaaacca
cttgacctgtcttctaaagtggtggatgcagacacttccaaagctgaccacatgaaaaag
atggctcccacagtcctggttcacagtcgggctgcaagtggcttagtgctctctggaagt
gagattccaaaagaaacactatctcctccaggaaatggctgttctatctatagatcagag
atcatcagcactgctccctcatcctgggtggtgccagggccaagccctaatgaagagaac
aatggcaaaagtctgtcgctgaaaaacaaggctttggactgggcaatcccgcaacagcgg
agttcctcgtgtccccgcatgggcggcacagatgctgtggtcactaatgtttcagggtcc
gtgtccagctcaggacgcccagcctctgcatcaccagcccccaatgccaatgcagatggc
accaagaccagcaggagctctgtggataccacgccatcagtcatccagcatgtgggccag
cccccatccacgcctgccaagcatagtggcagcaccagcagcaagggaaccaaagccagc
aacccagaaccgagtttcaaagcgagtgagaatggcctcccgccaacctcaatatttcta
tctccaaatgaagcattcaggtccccaccaattccctaccctaggagttacctcccttac
ccagcacccgaaggcatcgctctaagtcccctctctttacatggcaaaggacccgtgtat
cctcacccagttttgttacccaatggcagtctgtttcctgggcaccttgccccaaagcct
ggcctgccctacgggctgcacacgagcaggccagaatttgtgacctaccaagatgccctg
ggcctgggcatggtccatcccatgttaatcccacacacacccattgagatcacaaaagag
gagaagccggagagacggtcccgctcccatgagcgagcccgttatgaggacccaaccctc
cgtagccggttttctgagatgctggaagctagcagcgccaaactgcatccagaagtcccc
actgacaagaacctgaagccaaactctagctggaatcaaggaaagactggggtcaaaagc
gacaagctagtctatgtagaccttctccgagaagaagcagacgctaaagctgatgcagga
gcacccaaagcaggccttgtagccgagaatgtgggtcagaacacagaggccaccaagccc
tcagctgaccctgtgatccaacaacaccgggaattcatctccctcagagaggagctgggc
cgaatcactgacttccacgaatctttcactttcaaacaggcctcgagccagccagtgttc
agcttaggcaaggatagtggtgcagcaggaaccaacaaagagaacctgggggtgcaggta
gcaactccattcttggagacagctctgggcagcgagggccctgctgtgacttttggtaaa
acccaagaggatcccaaaccattttgtgtgggcggtgcccctccaaacatggatgtcacc
cccgcctataccaaagaaggaactgatgaggccgaatccaacgatggcaaagttctgaaa
cccaaaccatccaagctggcaaagagaattgctaactcggcaggttatgtgggcgaccga
ttcaagtgtgtcaccaccgaactgtatgcagattccagtcagctcagcagagagcagcgg
gcattgcagatggaaggattacaagaggacagtattttatgtctacccgctgcttactgt
gagcgtgcaatgatgcgcttctcagagttggagatgaaagagagagaaggtagccaccca
gcaaccaaagactccgaggtgtgcaaattcagcccagcagactgggaaaggttgaaagga
aatcaggaaaagaagccaaagtcagtcaccctggaagagaccattgccgaccagaatgac
agtgagcgatgtgagtacacctctggaaacaaacatgatctctttgaagccccagaggac
caagatcttcctgtggaaaagtatttcttggagaggccgcctgtgagtgagccacccact
gaccagggggtggtggacacgccacacagccccaccctccggctagataggaaacgcaaa
ctgtcaggtgacagcacccacactgagaccgctgtggaagagctagctgaggaccctctg
aaagccaagcggagacggatctccaaagatgactggcctgagagggaaatgacaaacagt
tcctctaaccacttagaagacccacattgtaatgagctgaccaacctgaaggtgtgcatt
gaattaacagggctccatcctaaaaagcaacgccacttgctgcaccttagagaacggtgg
gagcagcaggtgtcggcagctgagagcaaacctggccggcaaagcaggaaggaagtggcc
caggctgttcagcctgaggtcacctcccaggggactaacatcactgaagagaagcctggc
aggaaaaaggcagaggccaaaggcaacagaggctggtctgaagagtcgctcaaatcctgt
gacaatgagcaaggcttgcctgtgctctccggctctccgcccatgaagagcctttcatcc
accaatgcaagtggcaaaaagcagactcagccaagctgcacgccagcctcaaggctgcct
gccaagcagcagaaaattaaagaaagccagaagacagatgtgctgtgcacagaggaggac
gagggttgccaggctgcctccccgctgcaaaaatacacagacaacatcgagaagccatcc
gggaagagactgtgcaaaaccaagcacttgatacctcaggagtccaggagaagcttgcag
atcacaggagactactatgtggagaacactgacactaagatgactgtgcggagattcaga
aaacgacctgagcccagttcggactacgatttgtcaccaccagccaagcaggagccaaag
ccctttgaccggctgcaacaattgctaccggccacccaggccacccagctgccatgctca
aattctcctcaagagaccacccagtctcgccccatgccaccagaagctcggagacttatt
gtcaataagaatgctggcgagaccctcctgcagcgggctgcccggctaggctatgaggaa
gtggtcttatattgcctggagaacaaggtctgtgatgtcaatcatcgagacaatgctggc
tactgtgctctgcatgaagcttgcgccaggggatggctcaacatcgtgcgccacctcctt
gaatatggcgctgatgtcaactgcagtgcccaggatggaaccaggcctctgcatgatgct
gtggagaatgatcacttagaaattgtccgattgcttctttcctatggtgctgaccctact
ttggccacatactcagggagaaccatcatgaaaatgacccacagtgaacttatggaaaag
tttttaacagactatttaaatgacctgcagggtcgtagtgaagatgacaccagcggcgct
tgggagttctatggcagctctgtgtgcgaaccagatgacgaaagtgggtacgatgttttg
gctaatcccccaggaccggaagatccagatgaggaagaggagacctatagcgatttgttt
gagtttgagtttgccgaaagctccctcttgccatgttataacatccaagtgtccgtcgct
caggggccacgaaactggctcctgctctcagacgtgctcaagaagttgaaaatgtcctcc
cggatattccgtagcaattttcccaatctggagattgtcaccatcgcagagacggagttt
taccgacaggtctcaacaagtctcttgttctcctgccccaaagacctggaagccttcaat
cctgaaagcaaggagctgctggatctagtagaattcaccaatgagctccagacactgctg
ggctcctctgtggagtggctccaccctagtgacacgggccatgaaaactactggtga
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integrated database retrieval system