Mus pahari (shrew mouse): 110313879
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Entry
110313879 CDS
T05929
Symbol
Ptchd1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mpah04990
]
110313879 (Ptchd1)
Domain-containing proteins not elsewhere classified [BR:
mpah04990
]
Other domain-containing proteins
Patched domain-containing proteins
110313879 (Ptchd1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
110313879
NCBI-ProteinID:
XP_021043979
Ensembl:
MGP_PahariEiJ_G0032059
LinkDB
All DBs
Position
X:complement(134273844..134328306)
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AA seq
888 aa
AA seq
DB search
MLRQVLHRGLRTCFSRLGHFIASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPQH
SLAKIERNLVNSLFPVNRSKHRLYSDLQTPGRYGRVIVTSYQKANMLDQHHTDLILKLHT
AVTKIQVPRPGFNYTFAHICVLNNDKTCIVDDIVHVLEELKNARATNRTNFAITYPITHL
KDGRAVYNGHQLGGVTVHSKDRVKSAEAIQLTYYLQSINSLNDMVAERWESSFCDTVKLF
QKSNSKVKIYPYTSSSLREDFQKTSRVSERYLVTSLILVVTMAILCCSMQDCVRSKPWLG
LLGLVTISLATLTAAGIINLTGGKYNSTFLGVPFVMLGHGLYGTFEMLSSWRKTREDQHV
KERTAEVYADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAILFNYLYVLSF
YGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKPAWYRFLLTARFSEETAEGEEANTYES
HLLVCFLKRYYCDWITNTYVKPFVVLFYLIYISFALMGYLQVSEGSDLSNIVATATQTIE
YTTAHQKYFNNYSPVIGFYIYESIEYWNSSVQEDVLEYTKGFVRISWFESYLNYLRKLNV
STDLPKKNFTDMLRNSFLKAPQFSHFQEDIIFSKKYNDEVDVVASRMFLVAKTMETNREE
LYDLLETLRRLSVTSKVKFIVFNPSFVYMDRYASSLGAPLHNSCISALFLLFFSAFLVAD
SLINVWITLTVVSVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPLLSTFVLGKD
FTRTKWVKNALEVHGVAILQSYLCYIVGLFPLAAVPSNLTCTLFRCLFLIAFVTFFHCFA
ILPVILTFLPPSKKKRKEKKNPENREEIECVEMVDIDSTRVVDQITTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggcaggttctgcacaggggcttgaggacgtgtttctccaggcttggccacttc
attgccagtcacccggtcttctttgcttcggcgccggtgctcatctccatcctgctcggc
gccagcttcagccgctaccaggtcgaagagagcgtggagcacctgctggcgccccagcac
agcctagccaagatcgagcgcaacctagtcaacagcctcttcccggtcaaccgctccaag
caccggctctactccgacctgcagacccctgggcgctacggccgggtcattgtcacctcc
taccagaaagccaacatgctagaccagcatcacacggacctgatcttaaagttgcatact
gcagtgaccaagatccaggttccaaggcctggctttaactatacatttgcccacatatgt
gtcctgaataacgataagacttgcattgtggatgacatagtacatgtcctggaagagcta
aagaatgctcgggccaccaatcggaccaattttgctatcacatatccgatcactcactta
aaagatggaagggctgtctacaatgggcaccaactcggaggtgtcactgtgcacagcaag
gatcgggtgaaatctgcagaggccattcagcttacctactatctgcaatctatcaacagt
ctcaacgacatggtagctgagagatgggagtccagcttctgtgacactgtcaaactattc
cagaaatccaacagcaaagtcaaaatatacccgtacacatcatcatcactgagggaagat
ttccagaagaccagccgtgtatcagaacgctacctggtcaccagcctgatcctggtagtc
accatggctattctgtgctgctctatgcaggactgtgtccgcagcaaaccctggttaggc
ctacttgggttggtgactataagcctagctactctcactgcagccggaatcatcaatctt
actggtggaaaatacaactccaccttcctgggagtcccttttgttatgctaggtcatgga
ctatacgggacttttgaaatgttatcctcgtggaggaaaactagagaggaccaacatgtt
aaagagcgaactgcagaagtctatgcagactccatgctctccttctctctcaccactgcc
atgtacttggtcacctttggcataggggccagccctttcacgaacattgaggcagccagg
attttctgctgcaactcctgtattgcaattctcttcaactacctctatgtactctcattt
tatggttccagccttgtgttcactggctacatagaaaacaattaccagcatagtatattc
tgtagaaaagttccaaaacctgaggtattacaggagaagccagcatggtataggtttctt
ctgacagctagattcagtgaggaaactgctgaaggtgaggaagcaaacacttatgaaagt
cacttattggtatgtttcctcaaacgctattactgtgactggataaccaacacctatgtc
aagccttttgtagtcctcttttaccttatttatatttcctttgccttaatgggctatctg
caggtcagtgaagggtcagaccttagtaacatcgtagcaactgcaacacaaaccattgag
tacactactgcccaccaaaagtactttaacaactacagtcctgttattgggttttacata
tatgagtccatagaatattggaactctagtgtccaagaagatgttctagagtacactaag
ggttttgtgcggatatcctggtttgaaagctatttaaattatcttcggaaactcaatgtg
tccactgacttgcctaagaaaaatttcacagacatgttgaggaattccttcctgaaagct
cctcaattttcacattttcaagaggacatcatcttctctaaaaagtacaatgatgaagtt
gatgtagtggcctctagaatgtttttggtggccaagactatggaaacaaacagagaagaa
ctttatgatctcttggagactctgaggaggctttcagtcacctccaaggtgaagttcatt
gtctttaatccgtcttttgtgtacatggatcgatatgcctcctctctgggagcccccctg
cacaactcctgcatcagtgctttgttcctgctcttcttctcggcattcctggtagcagat
tcgctgatcaacgtctggatcactctcacggttgtgtctgtggagtttggagtgataggc
ttcatgacattatggaaagtcgaactggattgcatttctgtgctatgcttaatttatgga
attaactacacaattgacaactgtgctccactgttatccacatttgttctaggcaaggat
tttacaagaactaaatgggttaaaaatgccctggaagtgcatggggtagctattttacag
agttacctctgttatattgttggtctatttcctcttgcagctgtgccttcaaatctgacc
tgtacactgttcaggtgcttgtttttaatagcatttgtcaccttctttcactgctttgcc
attttacctgtgatacttactttcctgccaccctctaagaaaaaaaggaaagagaagaaa
aatcccgaaaaccgggaggaaattgagtgtgtagaaatggtagatattgatagtactcga
gtggttgaccaaattaccacagtgtga
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