Mus pahari (shrew mouse): 110313910
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Entry
110313910 CDS
T05929
Name
(RefSeq) LOW QUALITY PROTEIN: high mobility group protein B1-like
KO
K10802
high mobility group protein B1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03410
Base excision repair
mpah04140
Autophagy - animal
mpah04217
Necroptosis
mpah04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110313910
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110313910
09143 Cell growth and death
04217 Necroptosis
110313910
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
110313910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpah03036
]
110313910
03400 DNA repair and recombination proteins [BR:
mpah03400
]
110313910
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mpah04147
]
110313910
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
110313910
DNA repair and recombination proteins [BR:
mpah03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
110313910
MMR (mismatch excision repair)
Other MMR factors
110313910
Exosome [BR:
mpah04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
110313910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
NOA36
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
110313910
NCBI-ProteinID:
XP_021044035
LinkDB
All DBs
Position
2:18062906..18063647
Genome browser
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTGADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEDDEEDEEDEEEEEEEEDEDEEEDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcctcatatgcattctttgtg
caaacctgccgggaggagcacaagaagaagcacccggatgcttctgtcaacttctcagag
ttctccaagaagtgctcagagaggtggaagaccatgtctgctaaagaaaaggggaaattt
gaagatatggcaaaggctgacaaggctcgttatgaaagagaaatgaaaacctacatcccc
cccaaaggggagaccaaaaagaagttcaaggaccccaatgcacccaagaggcctccttcg
gccttcttcttgttctgttctgagtaccgccccaaaatcaaaggagagcatcctggctta
tccattggtgatgttgcaaagaaactaggagagatgtggaacaacactggagcggatgac
aagcagccctatgagaagaaggctgccaagctgaaggagaagtacgagaaggatattgct
gcctacagagctaaaggaaaacctgatgcagcgaaaaagggggtggtcaaggctgaaaag
agcaagaaaaagaaggaagaggaagatgatgaggaggatgaagaggatgaggaagaggag
gaagaagaggaagatgaagatgaagaagaagatgatgatgatgaataa
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integrated database retrieval system
