Mus pahari (shrew mouse): 110313921
Help
Entry
110313921 CDS
T05929
Name
(RefSeq) nuclear RNA export factor 1-like isoform X1
KO
K14284
nuclear RNA export factor
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03008
Ribosome biogenesis in eukaryotes
mpah03013
Nucleocytoplasmic transport
mpah03015
mRNA surveillance pathway
mpah05014
Amyotrophic lateral sclerosis
mpah05164
Influenza A
mpah05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110313921
03015 mRNA surveillance pathway
110313921
03008 Ribosome biogenesis in eukaryotes
110313921
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
110313921
05168 Herpes simplex virus 1 infection
110313921
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110313921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110313921
03009 Ribosome biogenesis [BR:
mpah03009
]
110313921
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110313921
mRNA cycle factors
Stress granule specific factors
110313921
Ribosome biogenesis [BR:
mpah03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
110313921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_NXF1-5
NXF_NTF2
Tap-RNA_bind
TAP_C
LRR_4
LRR_LRWD1
LRR_8
UBA_8
Motif
Other DBs
NCBI-GeneID:
110313921
NCBI-ProteinID:
XP_021044048
Ensembl:
MGP_PahariEiJ_G0031942
LinkDB
All DBs
Position
X:complement(113999353..114018474)
Genome browser
AA seq
692 aa
AA seq
DB search
MWSSPNENLQGRSSMIIQKNTNSETYKQQYGLTYKRSEKYYHTEYKMNHNRGFQGRKRGV
NYICNKFDRKNNHFDHSGAPYAMGMKRRRKRCSYGDQYFLTVRDDRKTEEGEMDLDAENG
TEEKWYKVTIPSGRKYEKTWLMRSIQNFCSEPFIPIDFHYVKNRARFFVQNAKTASALKD
VSYRICDETSRKIAIFVSPSVVPYSVQNQFTSEQMEYIRESMMNRYDASQKALDLEKFRF
DQDLMDKDIDMLLNRRSCMVATLQIIQSDIPELLSLNLKNNKLYQLDGLSDMTEKAPHVK
ILNLSGNKLKSFMELEKVKELKLEELWLEGNPLYHRFSDHSEYISAVQNLFPKLLRLDGE
DLIIPRRNLQNDKDLIVPTGKPRDGKDLIVPTGKPRDGKDLIVPTGNPQGGKDLIIPTGK
PQNGKDFTTVPTGMDIEVPQPCKESCNKSEVIKNLVLQFLKEYYLFYDNGDRLRLLDAYH
DQACFSLSVPFNVSDPDLNNLEEYFKYNRDIKRQQDSYMRMKLLKHTKHDIVNSLSLLPK
TQHDLCSFWVDLCFHTEMMLCFSVNGLFKEVEGKCRGCIRAFTRIFIAVPCSDSSVHSSF
RICIINDELIVRNASANEIQKAFTSLPAPDTSFKPLLSEEQQEMVKSFSVQSGMKLDWSQ
KCLEDNEWNYTKAGEAFTALQNEGKIPKEFFK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcctctccaaatgagaatcttcaaggcaggtcttccatgattattcagaagaac
actaattctgaaacatataaacaacagtatggcttaacatacaagagatctgagaaatac
tatcatacagaatacaaaatgaatcataaccgtggttttcaaggaagaaagagaggtgtg
aattatatctgcaataaatttgacagaaagaacaatcattttgatcattctggtgctcca
tatgccatgggaatgaaaagaaggagaaaaagatgcagttatggggaccaatattttctt
actgtgagggatgatagaaaaactgaggagggcgaaatggatctggatgctgaaaatgga
actgaggagaaatggtacaaggtcacaattccaagtggaagaaagtatgagaagacatgg
ctaatgaggtcaatccagaacttctgtagtgagcccttcatccctattgatttccactat
gtcaaaaaccgggcccggttctttgttcagaatgctaagactgcctctgcactgaaggat
gtcagctacaggatttgtgatgaaacaagcagaaaaatagcgatctttgtcagtccttct
gttgtaccctattctgtgcaaaaccagtttacatcagaacaaatggagtacataagggaa
tctatgatgaaccggtatgacgcctcccagaaagctctggacctcgaaaagttccgattt
gaccaggacttaatggacaaggatattgacatgctactgaatcgaagaagctgcatggtt
gccacactacagatcattcaaagcgatatccctgaactgttgtccttgaacttgaaaaac
aacaaactgtaccagctggatgggctgtctgacatgacagagaaggcccctcacgtgaag
attctgaacctctccggaaataaactgaagtcattcatggaattggagaaggtgaaagaa
ctgaagctagaagagctgtggctggaagggaaccccctctaccatcgcttctcggatcat
tctgagtatataagtgctgtacagaacctatttcccaagctgttgcgtctggatggcgag
gacctaataataccaagaagaaatcttcagaatgacaaggacctaatagtaccaacagga
aagcctcgggatggcaaggacctaatagtaccaacaggaaagcctcgggatggcaaggac
ctaatagtaccaacaggaaatcctcagggtggcaaggacctaataataccaacaggaaag
cctcagaatggcaaggactttacaacagtaccaacaggaatggacatcgaggtaccccaa
ccatgcaaggaaagctgtaacaaatctgaagtcataaaaaatctagttctacaatttctg
aaagagtactacttgttttatgacaatggagatcgacttcgccttctcgatgcttaccat
gaccaggcctgcttctccctgtcggttcctttcaatgtcagtgacccagacctgaacaac
ttggaagagtatttcaaatacaacagagatataaagaggcagcaagactcatacatgcga
atgaagttgctgaagcacacaaaacatgacatcgtgaactctcttagcttgttacccaaa
actcagcatgatctttgctctttctgggtggacttgtgtttccatacggaaatgatgctc
tgtttttctgtgaatggactattcaaggaagtggaaggaaaatgtcgaggctgcatccgt
gccttcacgaggatcttcattgctgtcccttgcagcgattcaagtgtccactcttccttc
agaatttgcatcataaacgatgagttgattgtgagaaatgccagtgccaacgagatacaa
aaggccttcacctcgttgcctgcacccgacacatcattcaagcctttactctctgaagaa
cagcaggaaatggtgaagtctttctctgtgcaatctggaatgaaacttgactggtctcag
aagtgccttgaagataatgagtggaactacaccaaagctggtgaggccttcactgccctc
cagaatgagggcaagatcccaaaggaattcttcaaataa
DBGET
integrated database retrieval system
