Mus pahari (shrew mouse): 110313938
Help
Entry
110313938 CDS
T05929
Name
(RefSeq) polypyrimidine tract-binding protein 1-like isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110313938
03041 Spliceosome [BR:
mpah03041
]
110313938
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
110313938
Spliceosome [BR:
mpah03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
110313938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
Nup35_RRM
Motif
Other DBs
NCBI-GeneID:
110313938
NCBI-ProteinID:
XP_021044062
LinkDB
All DBs
Position
X:complement(66548..68320)
Genome browser
AA seq
590 aa
AA seq
DB search
MSGNLPPSAKGKDSKRFKGDSRVNHGPSRVIHIHSLPSSVTETEILCLALPFGKVSNLLF
LKAKNQAFMEMSTQESANTMVNYYTWMTPVLRGQPVHIQFSHYKELRVSNPPSQMAALSP
VGALSREAVCSQVAAPGQAAASSQVGAQPCLPAEDPYQAWNVASATPASAVATGLVVAGQ
GTVLRILVDNYFYRVTLEVLHQLFSRFGTVLKIVTYTNNNRFQALLQYAHPLSAECAKLC
LDGQNIYDACCTLHIYFSGLTNLIVKYNNDMSRDYTRPDLPSDESQPSLVQVQNMATAVP
APVMTSASPDASTASSHTFAIPQAAGLAMSEVLKALALKAIPEVTAESAAEATSTATAGA
LAAEAAIAAAAAAAAAAAPGAESSMVTSGSSGVGNPVLLVANLNPEKVTPQSLFILFGAY
GDVHRVKILFNRKENALVQMADGSQAELALKHLNGHKLHGKPLCILLSKHQSVKLPREGK
EDQDLTKDYANSPLHRFKKPGSRNFQNIFPPSATLHLSNLPSSVSEEELKILFSSSGGAV
KAFKFFPKNHKMALIRMGSVEEAIQALVDLHGHPLGQNHHLRVSFSRVTI
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggaacttgcccccctcagccaaaggaaaggacagcaagaggttcaaaggggac
agcagggtcaaccacggcccctccagagtgatccacatccacagtctgcccagcagtgtc
acggaaacagagatcctctgtctcgcgctgccttttggaaaggtctccaacctactgttt
ctgaaggcgaagaaccaggctttcatggagatgagcacgcaggagtccgccaacaccatg
gtcaactactacacctggatgactcctgtgctgcgtgggcagcccgttcacatccagttc
tcacactacaaggagctcagggtaagcaacccccccagccagatggctgccctgagtccg
gtgggtgcccttagcagggaggctgtctgcagccaggtggctgcccccggccaggctgct
gcctccagccaggtgggtgcccagccatgcctgccagctgaggacccctaccaggcatgg
aatgtggcctcagccacccctgcctctgctgtggccacggggttagtggtggccgggcag
ggaactgtgctcaggatccttgtggacaactacttctaccgcgtgaccttggaagtgctg
caccagctcttctccaggtttggcacagttctcaaaatcgtcacgtataccaacaacaac
cggttccaggcgctgttacagtatgctcacccgttgagtgccgagtgtgccaagctgtgc
ttggatggacagaacatctatgacgcctgctgcacactgcacatttacttctctgggctc
accaacctcatagtcaagtacaacaacgacatgagccgagactacacacgtccagacctg
ccctcagatgaaagtcagccctctctggtccaggtccagaacatggccacagccgtccct
gcacctgtcatgacctcagcttctcccgatgcaagcactgcatcatctcacacctttgca
attcctcaagctgcaggcttggccatgtcagaagtgttaaaggccctggccctgaaagca
ataccggaagtgactgcagaatcagcagcagaagcaacatcaacagcaacagcaggagca
ctggcagcagaagcagcaatagcagcagcagcagcagcagcagcagcagcagcacctggg
gcagagagctcaatggtcacctcaggctcctcaggtgtggggaaccctgtcctcctggtt
gccaacctaaaccctgagaaagtcacaccccaaagcctcttcattctctttggtgcctat
ggcgatgtgcatcgcgtgaagatcttgttcaacaggaaggagaacgcgctagtgcagatg
gcagatgggagtcaggctgagctggccttgaagcacctgaatgggcacaagctgcatggg
aagcctctctgtatcctgctgtcgaagcaccagagtgtgaagctgccccgggagggcaag
gaggaccaggacctcaccaaggactatgccaactccccgctgcaccgctttaagaagccc
gggtccaggaacttccagaacatctttccaccctcagccaccctacacctctccaaccta
ccctcctcagtatctgaggaagagctnaagatcctcttctctagcagcgggggtgctgtc
aaggccttcaagttcttccccaagaaccacaagatggcgctgatccggatgggctccgta
gaggaagccatccaggcccttgtagacctgcatggccatcccctaggccagaaccatcac
ctgcgagtctccttctccagggtcactatctag
DBGET
integrated database retrieval system
