Mus pahari (shrew mouse): 110314180
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Entry
110314180 CDS
T05929
Name
(RefSeq) LOW QUALITY PROTEIN: toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mpah04054
]
110314180
Pattern recognition receptors [BR:
mpah04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
110314180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
TIR
TIR_2
LRR_9
DHU1_N
LRR_NXF1-5
ThsB_TIR
SmpB
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
110314180
NCBI-ProteinID:
XP_021044299
Ensembl:
MGP_PahariEiJ_G0031863
LinkDB
All DBs
Position
X:91847998..91859194
Genome browser
AA seq
991 aa
AA seq
DB search
MSGLYGILVQLEQSPYVKTVPLNMRRXFFFLVVTWMPEAVKMSRSSFVPSLQLLLMLVGL
SLLPLAETYGFNKCTQYEFDIHHVFCIRKKITNLTEAISDIPRYTTHLNLTHNDIQVLPP
WSFTNLPALVDLRLEWNLIWKIDEGAFRGLENLTLLNLVENKIQSVNNSFEGLSNLETLL
LSHNQITHIHKDAFTPLIKLKYLSLSRNNISDFSDILEAVQHLPCLEHLDLTNNSIMHLD
HSPRSLVSLTHLSFQGNKLTELNFSALSLPNVTNLSASQNGHEVIQNVYLETLPQLKSLN
LSGTVVKLENLLAKHLQNVRVLDLSNGELRHGHLNMKTVCHLLGNLPMLETLVFQKNATN
AEGIKQLAKCTRLLFLDLAQNSDLVHLNDSEFNALPSLQRLHLNKCQLSFISNKTWSSLQ
NLTILDLSHNKFKSFPDFAFFPLKHLEFLSLSRNPITELNSLAFSGLFSLKELNLAACWI
VTIDRYSFTQFPNLEVLDLGDNNIRTLNHGTFRPLKKLQALILSNNRLEILEPNAFSGLT
NLRSLDLMYNSLSYFHEHLFSGLENLLILKLGFNKITYETTRTLQYPPFIKLKSLNQLNL
EGQRHGIQVVPSNFFQGLSSLQELLLGKNPSVFLDHHQFDPLINLTKLDISGTKDGDRSL
YLNASLFQNLKRLKILRLENNNLESLVPGMFSSLQSLQVFSLRFNNLKVINQSHLKNLKS
LMFFDVYGNKLQCTCDNLWFKNWSVNTQEVHVPFLRSYPCQQPGSQSLLVDFDDAMCNFD
LGKVYFLCSFSMVLSTMVFSWFSTKMIASLWYGLYICRAWYLTKWHRTEKKFLYDAFVSF
SATDEAWVYKELVPALEEGSQTTFKLCLHQRDFEPGIDIFENIQNAINTSRKTLCVVSNH
YLHSEWCRLEVQLASMKMFYEHKDVIILIFLEEIPTYKLSSYHRLRKLINKQTFITWPDS
AHQQPLFWARIRNALGKETVEKEYTHLIVVE
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggctctatgggatcctggtccagctggaacaaagtccatatgtgaagactgtg
cctttgaatatgagaaggnaattttttttcctggttgtaacctggatgcctgaggcagtc
aagatgagtaggagcagctttgtgccatctctacagctcctgctcatgttagtgggactt
tctctgctacctttggcagaaacatatgggttcaacaagtgcacccagtatgaatttgat
attcaccatgtgttctgcattaggaagaagatcaccaacttgacagaggccattagtgac
atacctagatatactactcacctcaaccttacacacaatgacattcaagtcctccctccc
tggagcttcaccaatctgcctgctctggtggacttgagactagagtggaacttaatttgg
aagatcgacgaaggtgcctttaggggacttgaaaatttgactctgctgaatttagtggaa
aataagattcaaagtgtgaataactcctttgagggcctgtccaacctggagaccctgtta
ctaagccataatcagattacccatattcacaaagatgcctttactcctctaatcaaattg
aaatatttgagcctatctcgaaacaacattagcgatttttccgatattcttgaagcagtc
cagcatcttccatgcttggagcaccttgatcttactaacaacagcatcatgcacttggac
cacagccctaggtcactggtttctctgacccacctgagttttcaggggaacaaactaacg
gagttaaacttctctgctttgtcattacctaatgtaaccaatctaagtgcttcccagaat
ggccatgaagtcattcagaatgtgtatctggaaactctgccccaacttaaaagcttgaat
ctgagtggaacagtggtgaaattggaaaatcttttggccaaacacctgcagaatgtaagg
gttctggacctcagtaacggggagcttagacacggtcacttaaatatgaaaactgtttgt
cacctgcttggaaacctacccatgttagagacactggtttttcagaaaaatgccactaat
gcagagggcattaagcagctggcaaagtgcaccaggctcttgttcctcgacctggcccaa
aacagtgacttggttcatctcaatgacagcgagttcaacgctctgcccagtctccaaaga
ctgcatctgaacaagtgccaactctccttcatcagtaacaagacctggagttccttgcag
aacttgaccatcctagatctgagccacaacaagtttaaaagctttccagattttgcattt
ttccccttgaagcacttggagtttctctctctttcaagaaaccccatcacagaactcaat
agtctggcctttagtgggctattttcactgaaggagctcaacttggctgcatgttggatt
gtaacaattgacaggtattcctttactcagtttccaaacttagaggtcttagatcttgga
gacaacaatattcgtactctcaaccacggaaccttccgacctctgaaaaaactccaggct
ttgattctctccaacaaccgcctagaaatcctggagccaaatgcattttctggtctcact
aatctacgttcccttgacctgatgtacaacagcttgtcatattttcatgaacaccttttc
tcgggccttgaaaaccttctgattttgaagcttggttttaataagatcacatatgaaact
actaggacccttcagtatcctccatttataaagctcaagtctttgaatcagctcaacctg
gaaggacaaagacacgggattcaggttgttccgagcaactttttccaaggattgagtagc
ttgcaggagttactcttaggaaaaaatccctctgtattcctggaccaccaccaatttgac
cctctgattaacctcacaaagttggatatctcaggaacaaaagatggagatagaagcctc
tatttaaatgcttccttattccaaaacctcaaaaggctaaagatcctccgccttgaaaat
aacaacttagaatcactggtccctggcatgttctccagcttacagagcctccaggtcttt
tctttgagattcaacaacttgaaggtcattaatcaaagtcatctgaagaatctgaaatca
ctgatgttttttgatgtctatgggaacaaacttcagtgcacctgtgacaatttgtggttc
aagaactggtcagtgaacacacaggaggtccatgtccccttcctccggagctatccctgt
cagcagccaggcagtcagagtttacttgtagattttgatgatgccatgtgtaattttgac
ttgggaaaggtctacttcttatgttccttcagtatggtcctcagcaccatggtcttctcc
tggttcagtaccaagatgattgcatctctgtggtatggtttgtacatatgtagggcctgg
tacctcactaaatggcacagaacggagaagaagttcttatatgatgcgtttgtctctttc
tcggccactgatgaggcatgggtatacaaagagctggttccagccctagaagaaggcagc
cagaccacctttaaactctgtcttcaccaacgggattttgaaccaggcattgacatcttc
gagaacatccagaatgctattaacacaagcaggaaaaccttgtgtgtagtcagtaaccac
tacctacacagtgaatggtgccggcttgaagtccagctggctagcatgaagatgttttat
gagcacaaggatgtcattatcttgatcttcctcgaagagattccgacctataaactgtcc
agctaccaccgactcaggaaactcataaacaaacagacgtttatcacttggccggacagt
gctcaccagcagccactcttctgggctcgcatcagaaatgcattgggcaaggagactgtg
gagaaagaatatacacatctaattgttgttgagtga
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