Mus pahari (shrew mouse): 110315735
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Entry
110315735 CDS
T05929
Name
(RefSeq) contactin-6 isoform X1
KO
K06761
contactin 3/4/5/6
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mpah04515
]
110315735
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
mpah00537
]
110315735
Cell adhesion molecules [BR:
mpah04515
]
Immunoglobulin superfamily
Contactins
110315735
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
mpah00537
]
Others
110315735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Sp38
C2-set_3
V-set_CD47
Ig_4
Tissue_fac
Motif
Other DBs
NCBI-GeneID:
110315735
NCBI-ProteinID:
XP_021045377
Ensembl:
MGP_PahariEiJ_G0022446
LinkDB
All DBs
Position
2:120931518..121266290
Genome browser
AA seq
1028 aa
AA seq
DB search
MRLLWKLVILLPLINSCAGEGRFSRPIFIQEPQDVIFPLDLSRSEIILSCTANGYPSPHY
RWKQNGTDIDFGMTYHYRLDGGSLAISSPRTDQDIGIYQCLATNPVGTILSRKAKLQFAY
IEDFETKTRSTVSVREGQGVVLLCGPPPHFGELSYAWTFNDSPLYVQEDKRRFVSQDTGN
LYIAKVEPSDVGNYTCFVTNKEAHRSVQGSPTPLVLRTDGVMGEYEPKIEVHFPETIQAA
KDSSVKLECFALGNPVPDISWRRLDGSPMPGKVKYSKSQAILEIPKFKQEDEGFYECIAG
NPRGRNLAKGQLIFYAPPEWEQKIQNTYLSIYDSLFWECKASGNPNPSYTWLKNGERLNT
EERIQIENGTLIITMLNMSDSGIYQCAAENKYQTIYANAELRVLASAPDFSKNPIKKISV
VQVGGDISIECKPNAFPKASISWKRGTENLKQSKRVFFLEDGSLKICNVTRSDAGSYTCV
ATNQFGNGKSSGSLVVRERTIITVPPSKMDVTVGESIVLPCQVSHDPTMEVLFVWYFNGD
VIDLKKGVAHFERIGGESVGDLMIRNIQLGHSGKYLCTVQTTLEHLSAIADIIVRGPPGP
PEDVKVEHISSTTSQLSWRPGPDNNSPIQIFTIQTRTPFSVGWQAVATVPEILNGQTYNA
TVVGLSPWVEYEFRVVAGNNIGIGEPSKPSELLRTKASVPNVAPGNINGGGGSRSELVIT
WESIPEELQNGEGFGYIIMFRPVGTTTWMKERVALVESSKFIYRNESIMPLSPFEVKVGV
YNNEGEGSLSTVSIVYSGEDEPQLAPRGTSVQSFSASEMEVSWNAIAWNRNTGRVLGYEV
LYWTDNSKESMIGKIRVSGNVTTKNITGLRANTIYFASVRAYNTAGTGPSSPPVNVTTKK
SPPSQAPANIAWKLSNSKLCLNWEHVKTMENESEVLGYKILYRQNRQSKTHILETNNTSA
ELLVPFEEDYLIEIRTVSDGGDGSSSEEIRIPKMSSLSSTGVQILKPSTQFLSMVGFFYY
FAIHPLSR
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgctatggaaactggtaattctgctgccactcataaactcttgtgcaggtgag
ggtcgtttcagccgtcctatttttatccaggagccacaagatgtcatttttcctttggat
ttatctagatctgaaattattctgtcttgtactgcaaatggatacccttctccccattac
aggtggaaacagaatggtacagatattgacttcggcatgacttatcactataggttggat
ggaggcagtttggccatcagcagtcccagaacagatcaagatattggaatataccagtgt
ctggccaccaatcctgtgggcaccattctgagtagaaaagccaaactacagtttgcatat
attgaagactttgaaaccaaaaccagaagcacagtatctgtccgagaaggtcaaggagtg
gtactactctgtggcccaccaccacattttggagaattatcatatgcgtggaccttcaat
gatagccctttgtatgttcaagaggacaagcgacgatttgtatctcaagacacagggaac
ttgtacattgccaaagtagaaccatctgatgtgggcaattatacttgctttgtcacaaac
aaagaggcccatagaagtgtccaaggttcacctacacctttagtgctgcgcacagatggt
gtcatgggggaatatgagccaaagattgaagtgcattttcctgaaacaatacaagctgca
aaggattcatctgtaaaactggaatgctttgcccttggaaatccagtccctgatattagt
tggagaaggttggatggaagcccgatgccagggaaagtcaagtacagcaaatcccaagct
atccttgaaatccccaagttcaaacaagaggatgaaggcttctatgagtgcatcgcaggt
aaccctcgaggaagaaaccttgcaaagggtcaactaattttctatgctcccccagaatgg
gaacagaaaatccaaaatacatacctttctatctatgacagcttgttttgggaatgcaaa
gctagtggaaatccaaatccttcgtacacgtggctaaagaatggtgaacgtctcaacaca
gaagagagaattcagattgaaaatgggactcttatcatcaccatgctgaacatgtcagac
tctgggatctaccagtgtgctgcagaaaacaaatatcagacaatttatgcaaatgcagaa
ttgagagttttagcctcagctccagatttctccaaaaatcccattaaaaaaatttcagtt
gttcaagttggtggtgatatttctattgaatgcaaaccaaatgctttccccaaagcatcg
atttcctggaaaagaggaacagagaacctgaagcaaagtaaaagagttttcttcctggag
gatggcagccttaagatatgcaatgttaccagatcagatgctgggtcttacacctgtgta
gctacaaatcaatttggcaatgggaaaagcagtggcagtctcgtcgtgagagagagaacg
atcattacagtaccaccatctaaaatggatgttacggttggagagagtatcgtcttaccc
tgccaagtgtcccatgaccccaccatggaagttctatttgtttggtactttaatggagat
gtcatagatttaaagaaaggagtggctcattttgaaagaattgggggagaatctgttggg
gatttgatgataaggaatattcaattaggccattcgggaaaatatctatgcacagtacaa
acaacactagaacacttatctgctatagctgatatcattgtgagaggtcccccagggcca
ccggaagatgtaaaagtggagcacatttctagtaccacctcccagctcagctggagaccg
ggtcctgacaataacagccccattcaaatttttaccattcaaactcggacacccttttct
gtgggctggcaagcagttgctacagtccctgaaattctcaatggacagacatataatgca
acagtcgttggtttgagtccttgggtggaatatgaatttcgtgttgttgctgggaataac
attgggattggagagccaagcaaaccatcagagttgctgagaaccaaagcgtcagtcccc
aatgtggcaccaggaaatatcaatggaggcggtggaagcagatcagaacttgtcattaca
tgggagtccattccagaagaactacagaatggagaggggtttggatatatcatcatgttt
cggccagtgggcacaacaacctggatgaaagaaagagtggctcttgtagaatcatccaag
ttcatctatagaaatgaaagcatcatgcccctgtctccctttgaagtcaaagtgggagtg
tacaataatgaaggagaaggatcgctgagtaccgtgtccattgtctactctggggaagat
gagcctcagctggccccaagaggaacttctgtccagagtttttctgcttctgaaatggag
gtttcctggaatgctattgcttggaatagaaacactggaagagtgctgggctatgaggtc
ctgtactggacagacaactccaaagaatctatgattggtaaaattagagtcagtggaaat
gtcacaaccaagaacatcacaggactaagagctaatacgatttactttgcctctgtgaga
gcctataacactgcagggacaggaccctcaagtccgccagttaatgtcaccaccaaaaag
tcccctcctagccaagcaccagcaaacattgcctggaagctgtcaaattctaaattatgc
ttgaactgggagcatgtaaaaactatggaaaacgagtctgaagtgctgggctacaagatc
ctctatcggcagaaccgacagagtaaaactcatattttggaaacaaacaatacatcggct
gaactcctggttccattcgaagaagactatttgatcgaaatcagaacagtcagtgatggt
ggagatggaagcagcagtgaggaaatcagaattccaaaaatgtcaagtttgagttccacg
ggagttcagatcttgaagcccagcacccagttcctgtcaatggttgggtttttttactat
tttgctattcacccactttcaagatga
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