Mus pahari (shrew mouse): 110315915
Help
Entry
110315915 CDS
T05929
Symbol
Tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110315915 (Tmf1)
Membrane trafficking [BR:
mpah04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
110315915 (Tmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
SlyX
Motif
Other DBs
NCBI-GeneID:
110315915
NCBI-ProteinID:
XP_021045535
Ensembl:
MGP_PahariEiJ_G0022427
LinkDB
All DBs
Position
2:complement(113938259..113962681)
Genome browser
AA seq
1092 aa
AA seq
DB search
MSWFNASQLSSFAKQALSQAQKSIDRVLDIQEEEPSAWAEAIPYGEPGISSPVSGGWDTS
TWGLNSSSEPQSPPTASQAITKPVRRTVVDESENFFSAFLSPSDVQTIQKSPVVSKPPAK
SQRPEEEVKSSLQESSSPGQSRTSETAEPDVRDSVCVSGETPDVGTPSPVPEDKHEETAG
EESEVKVPTVRLKASENVVNVNTTEDVSTTSTQSLTAETKDMALEPKEQKHEDRQSNTPS
PPVSSFSSGTSTTSDIEVLDHESVISESSASSRQETSDAKSSLHLMQTSFQLLSASACPE
YSRLDDFQKLNESCCSSDAFERIDSFSVQSLDSRSVSEINSDDELPGKGYALVPIIVSPS
TPKTKVVESTEENAEEEEGNETLIAPSEEAELEESGRSATPVNCEQPDTLASPTPVSGGH
SASGPATEQCEAVENQPKAPPEKEDVCKTVEFLNEKLEKREAQLLSLSKEKALLEEAYDN
LKDEMFRVKEESSSVSSLKDEFTQRIAEAEKKVQLACKERDAAKKEMKTIKEELATRLNS
SQTADLLKEKDEQIQGLMEEGEKLSKQQLHNSNIIKKLRAKDKDNENVIAKLNRKAKELE
EELQHLRQVLDGKEEVEKQHRENIKKLNSVVERQEKDLGRLQVDMDELEEKSRSTQAALD
SAYRELTDLHKASAAKDSEVQEAALRREMKAKEELSGALEKAQEEARQQQEALALQVGDL
RLALQRAEQAAARKEDYLRHEISELQQRLQEAENRNQELSQSVSSTTRPLLRQIENLQAT
LGSQTSSWETLEKNLSDRLGESQTLLAAAVERERAATEELLANKIQMSSVESQNTLLRQE
NSRLQAQLESEKNKLRKLEDENSRYQVELENLKEEYVRTLEESKKEKALLSSQLEMERMK
VEQERKKTIFTQEALKEKDHKPFSVCSTPTMSRSSSISGVDAAGLQASFLSQDESHDRSF
GPMSTSASGSNLYEAVRMGAGSSIIENLQSQLKLREGEISHLQLEISNLEKTRSIMSEEL
VKLTNQNDELEEKVKEILMLRVQLRDLDQRYNTILQMYGEKAEEAEELRLDLEDVKNMYK
TQIDELLRQRLS
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgagctggttcaatgcctcgcagttgtccagcttcgccaagcaggccctgtcccaggcc
cagaagtccatcgacagggtcctggacatccaggaggaggagccgagcgcctgggccgag
gccatcccgtacggcgagccgggaataagttcccctgtgagtggaggatgggatacttca
acctggggattgaactcaagcagcgaacctcagagtcccccaacagcctctcaagcaatt
acaaagccagttcgaaggactgtagtcgatgaatctgaaaatttcttcagtgcctttctc
tctccatcggatgtccagaccattcagaagagtccagtggtatcaaaacctccagctaaa
tcccagcggccagaggaagaagtgaaaagcagcttacaggaatcatcatctcctggccag
tccagaacttctgagacagccgagcctgatgtgagagactccgtgtgtgtttcaggagag
actccagacgtgggcactccctcacctgtacctgaagacaagcatgaagaaaccgctggt
gaagagtctgaggtgaaggtgcccactgtgagattgaaggcgtctgaaaacgtagttaat
gtaaacacaacagaagatgtatctaccacatccactcagtctcttacggcagaaactaag
gatatggctttggaacctaaagaacaaaaacacgaagacagacagagcaacacaccttct
cctcctgttagctccttctcatcgggcacttccaccactagtgacattgaagttttagat
cacgaaagtgttatcagtgagagctcagctagttcaaggcaagagacttcggacgccaag
tcaagtcttcacctcatgcagacatcatttcagcttctctctgcatctgcttgtcctgag
tatagccgcttagatgactttcaaaagctcaatgagagttgctgctcatcggatgctttt
gaaagaatagactcatttagcgtgcagtctctagatagccggagtgtaagtgaaatcaac
tcagacgacgaactgccaggcaaaggctatgctttagtacctataatagtgagtccttca
accccaaagactaaagtagtagaatctactgaagagaatgctgaagaagaggaaggaaac
gagacattaattgcaccttctgaggaagcagaattagaggaaagtggccgaagtgctact
ccagttaactgtgaacagccagatacattggcttctcctacaccagtaagtggcggacac
tctgcctctggaccagccactgagcagtgtgaagctgttgaaaaccagccaaaagcacca
ccggagaaagaagatgtttgcaagacagttgaatttctgaatgagaagctagaaaagagg
gaggctcaattattgtcccttagtaaagaaaaggcacttctggaggaagcttatgataac
ctgaaggatgaaatgttcagagtaaaagaagaaagtagcagtgtttcttccctgaaagat
gaatttacccagagaattgcagaagcagaaaagaaagttcaactagcctgcaaggagaga
gatgctgctaagaaggaaatgaaaaccataaaggaagaacttgccactagattaaatagc
agtcaaactgcagaccttttgaaggaaaaagatgaacagattcaaggtttaatggaagaa
ggagaaaaactttcaaagcagcagctgcataattccaacatcattaagaaattaagagct
aaagataaagacaatgaaaatgttattgcaaagttgaacaggaaagctaaggagctggaa
gaggagttacagcacttacgacaggtccttgatggcaaagaggaggttgagaaacaacat
agagaaaatattaaaaaactaaattctgtggtagaacgccaggagaaagatcttggccgg
cttcaggtagacatggatgaacttgaagagaagagccgaagtactcaggctgccctagat
agtgcgtacagggaacttactgatcttcacaaagccagcgctgctaaggacagcgaggtg
caggaggctgctctgaggcgtgagatgaaggctaaagaagaactttctggggcactggag
aaggcccaggaagaagcccgtcagcagcaagaggcattagcgcttcaggtgggggacctc
aggctagcgttgcagcgggcagagcaagcagctgccagaaaagaggattacttacgccat
gagatcagtgaacttcagcagagactccaagaagcagagaatcgaaaccaagagctgagt
caaagtgtttcatcaacaaccagaccgttgcttcgacagatagaaaatttacaagcaact
ctggggtcccagacttcctcgtgggagacactggagaagaatctttctgataggcttggt
gaatcacagaccctgttggctgcagcagttgaaagagaacgtgcagctacagaagaactc
ttggccaacaaaatccagatgtcttcagtggagtcacagaatacattattacgacaggaa
aacagtagacttcaggcccagctagagtcagagaaaaataaactaagaaaactagaggat
gaaaatagtcggtaccaagttgaattagaaaatctaaaagaagaatatgtaagaacgctt
gaagagtcaaagaaagaaaaggcacttttgagcagtcagttagaaatggaaagaatgaaa
gttgaacaagaaaggaagaaaaccattttcactcaagaagcactaaaggaaaaggaccac
aagccgttttctgtttgtagcactcccaccatgtcacgatccagctctataagtggagtt
gatgctgcagggctgcaagcatctttcctgtctcaggatgagtctcatgaccgttcattt
gggccaatgtctacatcagccagtggaagcaatctttatgaagctgtaaggatgggagct
gggtcgagcattattgaaaatctgcagtctcagctaaagctgagggaaggagaaattagt
catttacagctagaaattagtaacctagaaaaaactcgatccataatgtccgaagagcta
gttaaattaacaaatcagaatgatgaacttgaggagaaagtgaaagagattcttatgctt
cgagttcaactgcgagatttggatcaaagatacaacactattctgcagatgtatggagaa
aaagcagaagaagcagaggaacttcgcctggatcttgaagatgtaaaaaatatgtataaa
actcaaatagatgaacttctaagacaaaggctcagttaa
DBGET
integrated database retrieval system
