Mus pahari (shrew mouse): 110316021
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Entry
110316021 CDS
T05929
Symbol
Caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110316021 (Caprin2)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
110316021 (Caprin2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
C1q
Motif
Other DBs
NCBI-GeneID:
110316021
NCBI-ProteinID:
XP_021045747
Ensembl:
MGP_PahariEiJ_G0022834
LinkDB
All DBs
Position
2:complement(163212262..163263929)
Genome browser
AA seq
1031 aa
AA seq
DB search
MKSAKSQVNHDQQGENQRALSPLQSTLSSAASPSQAYETYIDNGFICLKHKIRNIEKKKL
KLEDYKDRLKNGEQLNPDQLEAVEKYEEVLHNLEFAKELQKTFSALSQDLLKAQKKAQRR
EHMLKLEAEKKKLRTILQIQYVLQNLTQEHVQKDFKGGLNGAMYLPTKELDYLIKFSKLT
CPERNESLSVEDQMEQSSLYFWDLLEGSEKAVVGTTYKHVKDLLSKLLHSGYFESVPVLR
NSKEKAEEVLMQSEMKKQLLKTKSIKESESLVELVQPEIQPQEFLNRRYITEVKFSRKQE
NVEKSWGADYARKPSLLKCWNTLPEPDGQEKKKESSESWESSLKTQEVSKPVVSLEQGKL
RPTLQEEQKQQVSIVPVSQWKPESPKSKVGSPQEEQNVQETPKPWVVQSQKEQDPKKLPP
GSWAVSVQSEQSGSRSWTTPVCREQASVQPGTPVSWENNAENQKDSLVPQSQISLNSWGA
ASAGLLPNDQVLTRKLNVEPKDVSNPMPQPIDSSSAFPKDPVLRKEKLQDLMTQIQGTCN
FMQESVLDFDKPSSAIPSSQPPSACPVSTVCTEQNLSNQSDFLQEPSQASSPVTCSSNAC
LVTTDQASSGSETEFMTSETPEMVIPPCKPKPASALASPNPPLSKGFRLPPASGSSAAIS
TAPFQAMQTVFNVNAPLPPRKEQEMKESPYSSGYNQNFTSSSTQTVSQCQLPAVHIDQTT
QPSETGAGYHPDGTVQVSNGSLAFYPTPTSMFPRPAQPFISSRGALRGCSHGGRLLMNPY
RSPGGYKGFDSYRGLPSVSSGNYSQLQLQAREYPGTAYSQKDNFQECYKTSGTSSGLQAN
SRAGWSDSSQVSSPERDSETFNSGDSGLGDSRSMTPVDVPVTSPAAAILPVHIYPLPQQM
RVAFSAARTSNLAPGTLDQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAV
NVPLYVNLMKNEEVLVSAYANDGAPDHETASNHAILQLLQGDQIWLRLHRGAIYGSSWKY
STFSGYLLYQD
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcagccaagtcccaagtgaaccacgaccagcaaggggaaaaccagagggctctg
agccccctgcagtctactctcagttctgctgcatctccttcccaggcatacgaaacctat
attgataatggatttatatgccttaaacacaaaattaggaacatcgagaagaagaagctc
aaactggaagattataaagatcgcctaaaaaatggagagcagcttaacccagaccagttg
gaagcagtggaaaagtatgaagaagtacttcataatctggaatttgccaaggagcttcag
aaaactttttctgcactgagccaagatctgctgaaagcgcagaaaaaggcccagagaagg
gagcatatgctaaaacttgaggctgagaagaaaaaacttcgaactatacttcaaattcag
tatgtattgcagaatttgacacaagaacatgtacaaaaagacttcaaagggggcttgaat
ggtgcaatgtatttacctacaaaagaacttgactacctcattaaattctcaaaactgacc
tgccctgaaagaaatgaaagtctgagtgttgaagaccagatggagcagtcatccttgtac
ttttgggaccttttggaaggtagtgagaaagcagtggtaggaacaacatacaaacatgtg
aaagacctgctgtctaaattgctgcactcaggttattttgaaagtgtcccagttctcagg
aattctaaggaaaaagcagaagaagtgctaatgcaatcagaaatgaaaaaacagttactg
aagaccaagtctatcaaagagtcagaatctcttgtggaacttgtacagccagagatacag
ccacaggagtttcttaacagacgctatataacagaagtaaaattttcaagaaaacaagaa
aatgtcgaaaaatcctggggagcagattatgctaggaagccaagtctcctcaaatgctgg
aatacacttccagagccagatggtcaggagaagaagaaagagtcctcggagtcctgggag
tcttctcttaagactcaggaggtatcaaagcctgtggtttccttagaacaggggaagctc
aggccaacattgcaggaagagcagaagcagcaggtttctatagtacctgtcagtcagtgg
aagccagaaagccctaagtccaaagtgggcagccctcaagaagagcagaatgtacaggag
acaccaaagccatgggtggttcagtcacagaaagaacaagatccaaagaagctgcctcct
ggatcctgggcagtatctgtgcagagtgaacagagtggcagcagatcctggaccactcct
gtgtgcagagaacaggcttcagtgcagcctggaactccagtatcctgggaaaacaatgct
gagaaccagaaagactccttagtaccacaatcacagatttctctaaattcttggggagca
gcttcagcaggccttttaccaaatgaccaagtcctgacgaggaaattaaatgtagaaccc
aaagatgtgtctaaccccatgcctcagcctatagactcttcttctgcctttccaaaggat
ccagtattgaggaaagaaaaactgcaggacctcatgacccagattcaaggaacttgtaac
tttatgcaagagtctgttctagattttgacaaaccctcaagtgcaattccatcatcacag
ccgccttcagcttgtccagtctctacagtatgtacagaacaaaacttgtccaaccaaagt
gattttcttcaagagccatcacaggcttcttctcctgttacctgtagctcaaatgcttgc
ttggttactactgatcaggcttcttcgggatctgaaacagagtttatgacctcagagacc
cctgagatggtgatccccccctgcaagccaaagccagcttctgctcttgcttctccaaat
cctcccctgtcaaagggcttccggttacctcctgcaagtgggagctcagcagccattagc
acagcaccttttcaggccatgcagacagtgtttaatgttaatgcacctctgcctccacgg
aaagaacaagaaatgaaagaatctccttattcatctggctacaatcaaaattttacttca
tcaagtacacagacagtatcccaatgccagctcccagctgtacacatagaccagacaact
cagccttcagagactggtgcaggttaccatcctgatgggactgttcaagtaagcaatggc
agccttgccttctacccaacacccacgagtatgtttcccagacctgctcagccatttatc
agtagtcggggggctctgagagggtgttcacatggagggaggttactaatgaatccctat
cggtctcctggtggctacaaaggttttgatagttacagaggacttccttcagtttcaagt
gggaattacagccagctgcagctgcaagctagagaatatcctggaacagcttactctcaa
aaggataatttccaggaatgttataaaacatcagggacatctagtggacttcaggcaaat
tcaagagcagggtggagtgactcctctcaggtgagcagcccagaaagagacagcgagact
tttaacagtggagactctgggctaggagactctcggagcatgaccccagtggatgtgcca
gtgacaagcccagcagccgccatcctgccagtacacatctatcccctgcctcagcaaatg
cgagttgccttctcagctgccagaacatccaatctggctcctggaactttagaccaacct
attgtgtttgatcttctcctgaacaacttgggagagacctttgatcttcaacttggtaga
ttcaattgcccagtgaatggcacttacgtgttcatttttcacatgctaaagctggctgtg
aatgtaccgctgtatgtcaacctcatgaagaatgaggaggtcttggtgtcagcctatgcc
aacgatggtgctccagaccatgagacagcaagcaaccatgccattctccagctcctccag
ggagaccagatatggcttcgcttacacaggggagcgatttatggaagtagctggaaatac
tctacattttcaggctatcttctttatcaagattaa
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