Mus pahari (shrew mouse): 110316116
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Entry
110316116 CDS
T05929
Symbol
Smarcad1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
110316116 (Smarcad1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpah03036
]
110316116 (Smarcad1)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110316116 (Smarcad1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
ERCC3_RAD25_C
CUE
UBA_RNF216
TTC3_9th
Motif
Other DBs
NCBI-GeneID:
110316116
NCBI-ProteinID:
XP_021045869
Ensembl:
MGP_PahariEiJ_G0022198
LinkDB
All DBs
Position
2:83163381..83224122
Genome browser
AA seq
1021 aa
AA seq
DB search
MNLFNLDRFRFEKRSKIEEAPEAAPQPSQAGPSSPISLSAEEENAEGEGSRANTPDSDVT
EKTEDSSVPEPPDNERKGSLSCFQNQRAIQEYIDLSSDSEDISPNCSSTVQEKKFSKDTV
IIVSEPSEDEESHDLPSVTRKNDISELEDLSELEDLKDAKLQTLKELFPQRSDSDLLKLI
ESTSTMDGAIAAALLMFGDAGGGPRKRKLSSSSEEDEVNDDQSLKKPRGDRGEESKESAE
ASSNWEKQESIVLKLQKEFPNFDKQELREVLKEHEWMYTEALESLKVFAEDQDVQCASQS
EVTNGKEVARNQNYSKNATKIKMKQKISVKPQNGFNKKRKKNVFNPKKAVEDSEYDSGSD
AGSSLDEDYSSCEEVMEDGYKGKILHFLQVSSIAELTLIPKCSQKKAQKITELRPFNNWE
VLFTKMSKINGLSEDLIWNCKTVIQERDVVIRLMNKCEDISNKLTKQVTMLTGNGGGWNI
EQPSLLNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLFQEGNK
GPHLIVVPASTIDNWLREVNLWCPSLNVLCYYGSQEERKQIRFNIHNKYEDYNVIVTTYN
CAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINARNRLLLTGTPVQNNLL
ELMSLLNFVMPHMFSSSTSEIRRMFSSKTKPADEQSIYEKERIAHAKQIIKPFILRRVKE
EVLKLLPPKKDQIELCAMSEKQEQLYLGLFNRLKKSINNLEKNTEMCNVMMQLRKMANHP
LLHRQYYTPEKLKEMSQLMLKEPTHCEANPDLIFEDMEVMTDFELHVLCKQYQHINSYQL
DMDLILDSGKFRALGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQ
ISERIHLIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHR
VGQTKEVLVIKLISQGTIEESMLKINQQKLKLEQDMTTVDEADEGSMPADIATLLKTSMG
L
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttttcaacttggaccgttttcgctttgagaaaaggagtaagattgaggaagct
cccgaagcagcccctcagccctcccaggccggtccttcgtcaccaatttctcttagtgct
gaagaggagaatgctgaaggggaaggtagcagggcaaacaccccagactcagatgtaact
gagaaaacagaagattctagtgttccagaacctccagacaatgaaagaaaaggaagttta
tcatgtttccaaaatcaaagagcaatacaggaatatattgatttatcatctgatagtgaa
gatatttctccaaattgttccagtacagttcaagaaaaaaaattcagcaaagacacagtg
attatagtttcagagccatctgaagatgaagaatcccatgaccttccttctgttacacga
aaaaatgacatttcagaactggaagacctttcggaattggaagatcttaaagatgctaag
cttcagacattgaaggaactgtttccccaaagaagtgacagtgatcttctaaagttgatt
gaatcaacaagcactatggatggagccattgctgctgccttgctgatgtttggtgatgca
ggtggtggacccaggaaaagaaaattatcttcttcttctgaggaggatgaagttaatgat
gatcagtctttaaaaaagccacgaggggatcgtggagaagaatcaaaggagtctgcagaa
gccagcagcaactgggaaaagcaagaaagtattgtgttgaaattgcaaaaggaattccca
aattttgataaacaggaattaagagaagtgcttaaggagcacgaatggatgtacacagaa
gccttggagtctctgaaagtgtttgcagaagatcaagatgtgcagtgtgcttcacaaagt
gaggttacaaatggaaaagaagttgcaaggaatcaaaattattctaaaaatgcaactaaa
ataaagatgaaacagaaaatttccgtgaaaccacaaaatggctttaacaagaaacgtaag
aaaaatgtatttaatcctaagaaagccgtagaggactctgagtatgattcaggttctgat
gctgggagctcactggatgaagactacagcagttgtgaagaagtgatggaggacggctat
aaaggcaaaattcttcacttccttcaagtttcttcaattgctgagctgactttgattcct
aagtgttctcagaaaaaggctcagaaaataacagaactccggccctttaataattgggaa
gttctgtttacaaagatgtctaaaatcaatggcctatctgaagatttgatatggaattgc
aaaacggtaattcaagaaagggatgtagttataagacttatgaacaaatgtgaggacatt
tcaaataaattgaccaaacaagttacaatgctcaccggaaatggaggtggatggaacata
gaacagccctcccttctaaaccaaagtttgtcactcaagccctatcagaaggttggattg
aattggctggcattggtgcataaacatggacttaatggcattttggcagatgaaatgggc
ctaggaaaaaccattcaagccattgcattcctggcatacctctttcaagagggtaataaa
gggcctcatttgattgttgttccagcctccaccatagataactggttaagagaagttaac
ttatggtgccctagtttaaatgtgctctgttactatggttctcaagaagagcgtaaacaa
attagattcaacatccataataagtatgaggattacaatgtaattgttacaacgtataat
tgtgcaatcagcagctctgatgaccgcagtctctttcgacgcctgaaattgaattatgca
atttttgatgaaggccatatgctgaagaatatgggctctatccgctaccaacatctaatg
acaattaatgcacgtaaccgtttattgctcacgggcacacctgtgcagaataatctgcta
gaactcatgtcattgttgaattttgttatgccacacatgtttagcagtagcaccagtgaa
atccgaaggatgttttcttctaaaacgaaaccagcagatgagcagagtatatacgaaaag
gagagaatagcacacgcgaagcaaatcataaagcccttcatcctcaggagagtgaaagag
gaggttcttaagcttctgcctcccaagaaggatcagattgagctatgtgcaatgtcagag
aagcaggagcaactctacttgggccttttcaacagattgaaaaagtctatcaacaacctg
gaaaaaaacacagagatgtgcaatgtcatgatgcaattgagaaaaatggccaatcaccct
ttactacaccgccagtattacacacctgagaaactgaaggagatgtctcagctaatgctg
aaggaacctacgcattgtgaggctaaccccgacctgatctttgaagacatggaagttatg
acagattttgaactacatgtactttgtaaacagtatcaacacattaatagttaccagtta
gacatggatttaattttagattctgggaaattccgagccttaggatgcatcttgtctgag
ttgaaacagaagggtgatagagttgtattattcagccagtttaccatgatgctggatata
ttagaggttctcttaaagcatcaccagcataggtacctccggttagacgggaagactcag
atttctgaaaggattcatctaattgatgagtttaatacagatatggatatctttgtattt
ctcttgtcaactaaagctggtggattaggaataaatcttacttcagcaaatgttgttata
cttcatgacattgattgcaatccatacaatgacaaacaagcagaagacaggtgccataga
gttggtcagactaaagaagtattagttattaaattaataagccaaggaactattgaagag
tccatgctaaaaattaaccaacaaaagttgaaactagagcaagacatgaccacagtagat
gaagctgatgaaggaagtatgccagcagatatagccacattattaaaaacatcaatgggc
ctgtga
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integrated database retrieval system
