Mus pahari (shrew mouse): 110316140
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Entry
110316140 CDS
T05929
Symbol
Cpsf7
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03015
mRNA surveillance pathway
mpah03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110316140 (Cpsf7)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110316140 (Cpsf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110316140 (Cpsf7)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
110316140 (Cpsf7)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
110316140
NCBI-ProteinID:
XP_021045898
Ensembl:
MGP_PahariEiJ_G0014184
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All DBs
Position
1:122399453..122422360
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AA seq
471 aa
AA seq
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MSEGVDLIDIYADEEFNQDSEFNNTDQIDLYDDVLTAASQPSDDRSSSTEPPPPVRQEPA
PKPNNKTPAILYTYSGLRSRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRA
NGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRECVRV
PRGGIPPRAHSRDSSDSADGRATPSENLVPSSARVDKPPSVLPYFNRPPSALPLMGLPPP
PIPPPPPLSSSFGVPPPPPGIHYQHLMPPPPRLPPHLAVPPPGAIPPALHLNPAFFPPPN
ATVGPPPDTYMKASTPYNHHGSRDSGPPPSTVSEAEFEEIMKRNRAISSSAISKAVSGAS
AGDYSDAIETLLTAIAVIKQSRVANDERCRVLISSLKDCLHGIEAKSYSVGASGSSSRKR
HRSRERSPSRSRESSRRHRDLLHNEDRHDDYFQERNREHERHRDRERDRHH
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaggagtggatttgattgatatatacgctgatgaagagttcaatcaggactcg
gagttcaacaatacagatcagattgacctatatgatgatgtgttgacggctgcctcacag
ccctcagatgacagaagcagtagcacggaaccaccccctcctgttcgccaggagccagct
cccaaaccaaacaacaagacccctgcaattctgtatacatacagtgggctgcggagtcgg
cgagcagctgtctatgtaggcagcttctcctggtggaccacagaccagcagctgatccag
gttattcgctctataggagtctatgatgtggtggagttgaaatttgcagagaatcgtgcg
aatggccagtctaaaggatatgctgaggtggtggtagcctctgaaaattctgtccacaaa
ttgctggaactcttaccaggaaaagttcttaatggagaaaaagtagatgtgaggccggcc
acccggcagaacttgtcacagtttgaggctcaggctcggaaacgtgagtgcgtccgagtc
ccaagagggggaatacctccacgggcccactcccgagactctagtgattctgctgatgga
cgggcaaccccctctgagaatcttgtaccctcatctgctcgtgtggataagccccccagc
gtgttgccctactttaaccgtcctccttcagcccttcccctaatgggtctgcccccaccc
ccaattccacccccaccacctctctcctcaagctttggtgtccctcctcctcctcctggt
atccactaccagcatctcatgccccctcctcctcgattacctcctcatctggctgtacct
ccccctggggccatcccaccagcccttcacctcaacccagccttcttccccccaccaaat
gctacagtggggccgccaccagatacttacatgaaggcctctacaccctataaccaccat
ggcagccgagattcgggccctccaccttctacagtgagtgaagctgaatttgaagagata
atgaagcgaaacagagcaatttccagcagtgccatttccaaagcagtgtctggagctagt
gcaggggattacagtgacgccattgagacactactcacagccattgcagttatcaaacag
tcccgagtcgccaatgatgagcgttgccgggtccttatctcctctcttaaggactgtctt
catggcatagaggccaagtcttacagcgtgggtgccagtggaagctcttctaggaaaaga
catcggtccagggagaggtcacccagccggtcccgggagagtagcaggaggcaccgagac
ttgcttcataatgaagaccggcatgatgattatttccaagagaggaaccgggaacatgag
agacaccgggatagagaacgggaccggcaccactga
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