Mus pahari (shrew mouse): 110316183
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Entry
110316183 CDS
T05929
Symbol
Tmtc1
Name
(RefSeq) transmembrane and TPR repeat-containing protein 1 isoform X1
KO
K23424
protein O-mannosyl-transferase [EC:2.4.1.-]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mpah01003
]
110316183 (Tmtc1)
Glycosyltransferases [BR:
mpah01003
]
O-Glycan biosynthesis
O-linked Man type
110316183 (Tmtc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_11
TPR_8
TPR_14
TPR_16
TPR_19
TPR_12
TPR_17
TMTC_DUF1736
TPR_10
TPR_CcmH_CycH
TPR_7
TPR_9
TPR_15
TPR_Slam
ANAPC3
HAT_PRP39_C
TPR_MalT
ARM_TT21_C
TPR-S
NatA_aux_su
FAT
ARM_TT21_4th
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
ARM_TT21_N
ARM_TT21_5th
BTAD
Mad3_BUB1_I
ChAPs
TPR_5
DUF7017
Suf
ARM_TT21_2nd
Vps39_1
TPR_21
PNTB_4TM
NRDE-2
Alkyl_sulf_dimr
Motif
Other DBs
NCBI-GeneID:
110316183
NCBI-ProteinID:
XP_021045942
Ensembl:
MGP_PahariEiJ_G0022832
LinkDB
All DBs
Position
2:complement(162601735..162816728)
Genome browser
AA seq
942 aa
AA seq
DB search
MLVTRGDRGGGERAPSRRPRCGLVPAGAAALLAGASCLCYGRSLRGEFVHDDVWAIVNNP
DVRPGTPLRWAIFANDFWGKGLADSTSHKSYRPLCVLSFRLNIFLTGMNPFYFHAVNVIL
HCLVTLVLMYTCDKTVFKNRGLAFVTALLFAVHPVHTEAVAGIVGRADVLACLLFLLAFL
SYQRSLDQGCAGQCFPPTASPFFLLLSLFLGTCAMLVKETGVTVFGVCLVYDLFSPSHKQ
DKLSNGAVCQHSSGQPGSPQPSSQQAHPHRESRKQRFSHKDSWGGYHSPLPPEPKSSGFP
VSQRAVWSLMRCLTRSTNRNSLLTLRPFLKRALLVISYVIVILYFRLWIMGGTMPLFSEQ
DNPASFSPYILTRFLTYSYLLAFNVWLLLAPITLCYDWQVGSIPLVETIWDVRNLATILL
AVVMALLSLHCVAAFKKLEHKEVLAGLLFLVFPFIPASNLFFRVGFVVAERVLYMPSMGY
CILFVHGLSKLCAGLSRCGATSLMASTVLLLLLFSWKTVKQNEIWLSRESLFRSGVQTLP
HNAKVHYNYANFLKDQGRNKEAIYHYRTALKLYPRHASALNNLGTLTKDMAEAKMYYQKA
LQLHPQHNRALFNLGNLLKSQEKTEEAIVLLKESIKYGPDFADAYSSLASLLAEQERFKE
AEDVYQAGIKNCPDSSDLHNNYAVFLVDSGFPEKAVAHYQQAIQLSPSHHVAVVNLGRLY
RSLGENSKAEEWYRRALKVARTAEVLSPLGALYYNTGRHKEALEVYREAVSLQPSQRDLR
LALAQVLAVMGQTKEAEKITVHIVSEEPRCLECYRLLSAIHSKQEHHEKALEAIEKALQL
KPKDPKVISELFFTKGNQLREQNLLDKAFESYEAAVTLDPDQAQAWMNMGGIRHIQGSYV
SARAYYERALKLVPDSKLLKENLAKLDRLERRLQEVRERDQT
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgacccgcggggaccgcggcggcggggagcgcgcgccctcgcggcgcccgcgc
tgcgggctggttccagcgggggccgcggcgctgctagctggggccagctgcctttgctac
ggccgctcgctgcggggcgagtttgtgcacgacgatgtgtgggcgatcgtgaacaacccc
gacgtgcggcccgggaccccactgcgctgggccatcttcgctaacgacttctggggcaag
ggcctggcggacagcaccagccacaagtcctatcggccactgtgcgtgctgtccttcagg
ctaaacatatttctgactggcatgaaccctttctacttccatgcggtcaatgtcattctg
cactgcctggtgacccttgtgctgatgtatacctgtgataaaacagtcttcaagaatcgc
ggactggcattcgtcacagcccttctctttgcggtgcaccctgtccacactgaggcggtg
gctggcattgtgggcagagctgatgtgctagcgtgcctcctgttcctgctggcctttctt
tcctaccaaaggagtctggatcagggctgtgcagggcagtgcttccccccgacggcttct
cccttcttcctgctgctcagtttgtttctggggacctgtgccatgctggtgaaggagaca
ggcgtcaccgtgtttggagtctgcttggtttatgatctcttctccccctcccacaagcag
gacaagttgagcaatggggcagtctgtcagcacagctccgggcagccagggagcccccag
ccttcctctcagcaagcccacccccaccgtgagagcagaaagcagcgcttctcacacaaa
gactcctggggaggctaccattcaccattgccaccagagcccaagagcagtggattcccc
gtgtcccagagagcagtgtggtctctgatgaggtgtctgactagaagtaccaacagaaat
tcccttcttaccttgagaccgtttttaaagcgggcccttttggtcatcagttatgtgatt
gtcattttgtatttccgcctgtggataatgggaggaactatgcccctcttctcagagcag
gacaatccagcttcattctcgccgtacatccttacaaggttccttacctattcctacctc
ctggccttcaatgtatggcttctgctggcacccatcaccctgtgctacgactggcaagtg
ggcagtatccctctggtggagaccatatgggatgtgaggaaccttgctaccatccttctg
gcagtggtgatggccttactgagcctgcactgtgtggcagccttcaagaagctggagcac
aaggaagtgttggccggcttgctgttcctcgtgttcccgttcattccagccagcaacctc
ttcttcagggtgggctttgtggtggccgagagagtcctgtacatgcctagcatgggctac
tgcattctgtttgtgcatggactgagtaagctctgtgctgggctgagccggtgcggggcc
acctccctgatggcgtccactgtgttgctgctgctgctgttttcctggaaaactgtgaag
cagaatgaaatttggctgtcaagagagtccttattcaggtctggagttcagactctaccc
cacaatgccaaggttcattacaactacgccaatttcctaaaagaccaaggtcggaacaaa
gaagcgatctaccactacagaaccgccctcaagctgtacccacgccatgcaagtgctctg
aacaaccttgggacactgacaaaggacatggcagaagcgaagatgtactaccagaaggca
ttgcagctccatcctcagcacaaccgtgcacttttcaatctggggaatctcctcaagtcc
caggagaaaacagaagaagccatcgtgctgctgaaggaatccattaagtatggtccagat
tttgctgatgcctattcaagcttggcttccctactggctgagcaggaaagatttaaggaa
gctgaggacgtctaccaggctggaataaagaactgtccagacagctcagacttacacaac
aactacgcagttttcttagttgactctggctttcctgagaaggccgtggctcactaccag
caggccatccagctcagcccaagccatcatgtggctgtggtgaatcttggccgactctac
aggtccctgggagagaacagcaaggctgaagagtggtacagacgtgccctgaaggtggcc
cgcacagctgaggtactgtcacctctgggagcactctattacaacactggccgacacaaa
gaggcactggaagtgtacagggaagctgtctcactccagccttcccagagggatctccgc
ctggctctggcacaggttttagcagtgatgggtcagaccaaagaagctgaaaagataacg
gtccacatagtctctgaggagcccaggtgcctggagtgctaccgcctcctgtcagcaatc
cacagcaagcaggagcaccacgagaaggcactcgaggccatagagaaggctcttcaactg
aagcccaaggacccaaaagtcatatctgaacttttctttacaaaaggaaaccagctaaga
gaacagaaccttctggacaaagcttttgagagctatgaagctgctgtgaccctggatcct
gaccaggcacaggcatggatgaacatgggtggcatccggcacatccagggaagctatgtg
tctgcaagggcctattatgagagagccctgaagctggttccagacagcaagctgctgaag
gaaaatctggccaagctggatcgcctggagaggagattacaagaagtcagagaacgggat
caaacatag
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