Mus pahari (shrew mouse): 110316202 Help Entry 110316202         CDS       T05929                                  Symbol Col1a2 Name (RefSeq) collagen alpha-2(I) chain   KO K06236   collagen type I alpha Organism mpah  Mus pahari (shrew mouse) Pathway mpah04151   PI3K-Akt signaling pathway mpah04510   Focal adhesion mpah04512   ECM-receptor interaction mpah04611   Platelet activation mpah04820   Cytoskeleton in muscle cells mpah04926   Relaxin signaling pathway mpah04933   AGE-RAGE signaling pathway in diabetic complications mpah04974   Protein digestion and absorption mpah05146   Amoebiasis mpah05165   Human papillomavirus infection mpah05205   Proteoglycans in cancer mpah05415   Diabetic cardiomyopathy Brite KEGG Orthology (KO) [BR:mpah00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     110316202 (Col1a2)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     110316202 (Col1a2)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     110316202 (Col1a2)   09142 Cell motility    04820 Cytoskeleton in muscle cells     110316202 (Col1a2)  09150 Organismal Systems   09151 Immune system    04611 Platelet activation     110316202 (Col1a2)   09152 Endocrine system    04926 Relaxin signaling pathway     110316202 (Col1a2)   09154 Digestive system    04974 Protein digestion and absorption     110316202 (Col1a2)  09160 Human Diseases   09161 Cancer: overview    05205 Proteoglycans in cancer     110316202 (Col1a2)   09172 Infectious disease: viral    05165 Human papillomavirus infection     110316202 (Col1a2)   09174 Infectious disease: parasitic    05146 Amoebiasis     110316202 (Col1a2)   09166 Cardiovascular disease    05415 Diabetic cardiomyopathy     110316202 (Col1a2)   09167 Endocrine and metabolic disease    04933 AGE-RAGE signaling pathway in diabetic complications     110316202 (Col1a2)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:mpah00536]     110316202 (Col1a2) Glycosaminoglycan binding proteins [BR:mpah00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    110316202 (Col1a2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  110316202 NCBI-ProteinID:  XP_021045970 Ensembl:  MGP_PahariEiJ_G0021831 LinkDB All DBs Position 2:26260007..26295377 Genome browser AA seq 1321 aa AA seqDB search MLSFVDTRTLLLLAVTSCLATCQYLQSGSVRKGPTGDRGPRGQRGPAGPRGRDGVDGPVG PPGPPGPPGPPGPPAPPGLGGSFAAQYSDKGVSPGPGPMGLMGPRGPPGAVGAPGPQGFQ GPAGEPGEPGQTGPAGPRGPAGSPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLP GFKGIRGHNGLDGLKGQPGAQGVKGEPGAPGENGTPGQAGARGLPGERGRVGAPGPAGAR GSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEVGLPGLSGPV GPPGNPGANGLTGAKGATGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSK GETGNKGEPGSAGAQGPPGPSGEEGKRGSPGEAGSAGPAGPPGLRGSPGSRGLPGADGRA GVMGPPGNRGSTGAAGARGPNGDAGRPGEPGLMGPRGDPGKPGEKGHPGLAGARGAPGPD GNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPSGAAGEVGKPGERGLPGEFGLPGPA GPRGERGTPGESGAAGPSGPIGSRGPSGAPGPDGNKGEAGAVGAPGSAGASGPGGLPGER GAAGIPGGKGEKGETGLRGDTGNTGRDGARGVPGAVGAPGPAGASGDRGEAGAAGPSGPA GPRGSPGERGEVGPAGPNGFAGPAGAAGQPGAKGEKGTKGPKGENGIVGPTGPVGAAGPS GPNGPPGPVGSRGDGGPPGMTGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGLRGPRGDQ GPVGRTGETGASGPPGFTGEKGTPGEPGSAGPPGTAGPQGLLGAPGILGLPGSRGERGLP GIAGALGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGSDGPPGRDGQPGHK GERGYPGSIGPTGAAGAPGPHGTVGPAGKHGNRGEPGPAGSVGPVGAVGPRGPSGPQGIR GDKGEPGDKGHRGLPGLKGHNGLQGLPGLAGLHGDQGAPGPVGPAGPRGPAGPSGPVGKD GRSGHPGPVGPAGVRGSQGSQGPAGPPGPPGPPGPPGVSGGGYDFGFEGDFYRADQPRSQ PSLRPKDYEVDATLKSLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWNSDYYWIDPNQG CTMDAIKVYCDFSTGETCIQAQPVNTPAKNSYSRAQTNKHVWLGETINGGSQFEYNVEGV SSKEMATQLAFMRLLANRASQNITYHCKNSIAYLDEETGSLNKAVLLQGSNDVELVAEGN SRFTYSVLVDGCSKKTNEWGKTIIEYKTNKPSRLPFLDIAPLDIGGADQEFRVEVGPVCF K NT seq 3966 nt NT seq  +upstreamnt  +downstreamnt atgctcagctttgtggatacgcggactctgttgctgcttgcagtaacttcgtgcctagca acatgtcaatatttacaatcgggatctgtacgaaagggccccactggagacagaggtcca cgtggacaaaggggcccagcaggtccccgaggcagagatggtgttgatggtcccgttggc cctcctggtccccctggtccccctggtcctcctggcccccctgcgccccctggtcttggt gggagctttgctgctcagtattctgacaaaggagtttcacctggccctggaccaatgggc ttaatgggacccagaggccctcctggtgctgttggagcccctggccctcaaggtttccaa ggacctgctggtgagcctggtgagcctggtcaaacggggcctgcaggtccccgaggtcca gctggctctcctggcaaggctggtgaggatggtcaccctggaaaacccggaagacctggg gagagaggagtcgttggaccacagggtgctcgtggtttccctgggactcctggacttcct ggcttcaaaggcataagaggacacaatggtctggatggattgaagggacagcctggtgca cagggtgtgaagggtgaacctggtgcccctggagagaatggaactccaggtcaagcaggg gcccgagggcttcctggcgagagagggcgtgtcggagctcctggcccagctggtgcccgc ggcagtgatggaagcgttggccccgtcggccctgctggtcccattgggtctgctggaccc ccaggtttcccaggtgctcctggtcccaagggtgaacttgggcccgttggtaaccctggc cctgctggtcctgctggtccccgtggtgaagtgggtcttccaggtctttctggccctgtt ggacctcctggcaatcctggagcaaatgggctcactggtgccaagggcgctactggactc cctggtgttgctggagctccgggtctccctggcccccgtggtattcctggccccgttggt gctgctggtgcgaccggtgccagaggacttgttggtgagcccggtccggctggctccaaa ggagagaccggtaacaagggtgagccaggctctgctggagcccaaggtcctcctggtccc agcggtgaagaaggaaagagaggatctcccggagaagctggatctgctggccctgcaggg cctccagggcttagaggcagccctggttctcgaggtcttcctggagctgatggcagagct ggtgtaatgggtcctcctggcaatcgtggttcaaccggcgctgctggagcccgaggtcct aatggagatgccggtcgccctggggaacctggtctcatgggacccagaggtgatcctggc aaacctggtgagaaaggccaccccggtcttgctggtgctcggggagctccaggacccgat ggcaacaatggagctcagggcccccctggaccccagggtgttcaaggcggcaaaggtgaa caaggccctgctggtcctccaggtttccagggtctgcctggtccctcaggtgctgctgga gaagttggcaagcccggagaaaggggtcttcctggtgaattcggtctccctggtcctgct ggtccaagaggagaacgtggtaccccgggtgagagtggagctgctggtccttctggtcct attggaagccgaggtcccagtggggccccagggcctgatggaaacaagggtgaagctggt gcagtcggtgctccaggcagtgctggtgcctctggtcctggtggacttccaggagagagg ggtgctgctggcatacccgggggcaaaggagaaaagggtgaaactggtctccgaggtgac actggcaacactggtagagatggtgctcgtggtgttcctggtgctgtaggtgcccctggt cctgctggggcctcaggtgaccggggcgaagctggtgctgccggtccttctggcccagct ggtcctcgaggtagccctggtgaacgtggtgaagttggccctgctggccccaatggattt gctggtcctgctggtgctgctggccaaccaggtgctaaaggagagaaggggaccaaaggg cctaagggtgaaaatggcatcgttggtccaaccgggcctgttggagctgctggcccatct ggtcctaatggtccccctggtcctgttggaagtcgtggtgatggagggccccctggtatg actggcttccctggtgctgctggacggactggccccccaggacccagtggtattactggc ccccctggtcctcctggtgctgctgggaaagaagggctccgtggtccccgtggcgaccaa ggtccagttggccgaactggagaaacgggtgcatctggaccccctggatttactggtgaa aagggtacccctggagagcctggttccgcaggaccccctggtaccgcaggtcctcagggt cttcttggtgctcccggtattctgggtctccctggctctagaggtgaacgtggtctgcca ggtattgccggtgctctgggtgaacctggccctctaggcatcgcaggccctcctggggcc cgtggtccccctggtgctgtgggcagccctggagtgaatggtgcccctggtgaagctggt cgtgatggtaaccctggcagtgatggtcccccaggtcgtgacggtcagcctggacacaag ggggagcgtggttaccctggcagcatcggtccgactggtgctgcaggagcccctggtcct cacggtactgtcggtcctgctgggaaacatggaaaccgaggtgaacctggtcctgctggt tctgttggtcccgttggtgctgttggtccaagaggtcctagtggtcctcaaggcatcaga ggtgacaaaggagagcctggtgataaagggcacaggggtcttcctggcttgaaaggacac aatggattgcagggtcttcctggtcttgctggcctacatggtgaccaaggagctcctggc cctgtgggtcctgctggtcccaggggtcctgctggaccttctggccctgttggcaaagat ggtagatctggacatcctggaccagttgggcctgctggtgttcgtggttctcagggtagt caaggtcccgctggtccccctggtccccctggacctcctgggcctcctggtgtcagcgga ggtggctatgactttggttttgaaggagacttctaccgggctgaccagcctcgctcacaa ccttcactcagacccaaggactatgaagttgatgcaactctgaaatctctcaataaccag attgagacccttctcacccctgaaggctctagaaagaaccctgctcgcacgtgccgggac ttaagactcagccacccagagtggaacagcgattactactggattgaccctaaccaagga tgtactatggatgccatcaaagtgtactgtgatttctctactggtgaaacttgcatccag gcccaacctgtaaacaccccagccaagaactcatacagccgcgcccagaccaacaagcat gtctggttaggcgagactatcaatggtggcagccagttcgaatacaacgtagaaggggta tcctccaaggaaatggcaactcagctcgccttcatgcgcctgctagccaaccgtgcctct cagaacatcacctaccactgcaagaacagcattgcatacctggatgaggagacgggcagc ttgaacaaggctgtgcttctgcagggttccaacgacgtcgaacttgttgctgagggcaac agcaggttcacctactctgtccttgtcgatggctgctccaaaaagacaaacgaatggggc aagacaatcattgaatacaaaacaaataagccatctcgcctgccgttccttgacattgca cctctggacattggtggtgctgaccaagaattccgtgtggaggttggccccgtctgtttc aaataa

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