Mus pahari (shrew mouse): 110316212
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Entry
110316212 CDS
T05929
Name
(RefSeq) phosphatidylcholine translocator ABCB4 isoform X1
KO
K05659
ATP-binding cassette, subfamily B (MDR/TAP), member 4 [EC:
7.6.2.2
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah02010
ABC transporters
mpah04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110316212
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
110316212
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mpah02000
]
110316212
Enzymes [BR:
mpah01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
110316212
Transporters [BR:
mpah02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
110316212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
Rad17
RsgA_GTPase
Zeta_toxin
AAA_5
AAA
AAA_29
AAA_14
AAA_7
G-alpha
SbcC_Walker_B
APS_kinase
AAA_15
nSTAND1
NTPase_1
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
110316212
NCBI-ProteinID:
XP_021045981
Ensembl:
MGP_PahariEiJ_G0021733
LinkDB
All DBs
Position
2:5109205..5169861
Genome browser
AA seq
1276 aa
AA seq
DB search
MDLEAARNGTARRLDGDFELGSISNQGREKKKKVNLVGLLTLFRYSDWQDKLFMFLGTVM
AIAHGSGLPLMMIVFGEMTDKFVDNTGNFSLPVNFSLSMLNPGRILEEEMTRYAYYYSGL
GGGVLVAAYIQVSFWTLAAGRQIKKIRQKFFHAILRQEMGWFDIKGTTELNTRLTDDISK
ISEGIGDKVGMFFQAIATFFAGFIVGFIRGWKLTLVIMAISPILGLSTAVWAKILSTFSD
KELAAYAKAGAVAEEALGAIRTVIAFGGQNKELERYQKHLENAKKIGIKKAISANISMGI
AFLLIYASYALAFWYGSTLVISKEYTIGNAMTVFFSILIGAFSVGQAAPCIDAFANARGA
AYVIFDIIDNNPKIDSFSERGHKPDSIKGNLEFSDVHFSYPSRANVKILKGLNLKVKSGQ
TVALVGNSGCGKSTTVQLLQRLYDPTEGTISIDGQDIRNFNVRCLREVIGVVSQEPVLFS
TTIAENIRYGRGNVTMDEIEKAVKEANAYDFIMKLPQKFDTLVGDRGAQLSGGQKQRIAI
ARALVRNPKILLLDEATSALDTESEAEVQAALDKAREGRTTIVIAHRLSTVRNADVIAGF
EDGVIVEQGSHSELMKKEGIYCRLVNMQTSGSQILSEEFEVELSGEKAAGDVAPNGWKAR
IFRNSTKKSLKHSHQNSLDVETNELDANVPPVSFLKVLKLNKTEWPYFVVGTVCAIINGA
LQPAFSIILSEMIAIFGPGDDAVKQQKCNMFSLVFLGLGVLSFFTFFLQGFTFGKAGEIL
TTRLRSMAFKAMLRQDMSWFDDHKNSTGALSTRLATDAAQVQGATGTRLALIAQNTANLG
TGIIISFIYGWQLTLLLLSVVPFIAVAGIVEMKMLAGNAKRDKKEMEAAGKIATEAIENI
RTVVSLTQERKFESMYVEKLHGPYRNSVRKAHIYGITFSISQAFMYFSYAGCFRFGSYLI
VNGHMRFKDVILVFSAIVLGAVALGHASSFAPDYAKAKLSAAYLFSLFERQPLIDSYSRE
GLWPDKFEGSITFNEVVFNYPTRANVPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLE
RFYDPMAGSVLLDGQEAKKLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRAVSHEE
IVRAAKEANIHPFIETLPQKYDTRVGDKGTQLSGGQKQRIAIARALIRQPRVLLLDEATS
ALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIENGKVKEHGTHQQLLAQK
GIYFSMVNIQAGTQNL
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggatcttgaggcagcaagaaacggaacagcacggcgcctggacggcgactttgaacta
ggcagcatcagcaaccaaggcagagaaaagaagaagaaagtgaatttagttggcctgttg
acactgttccgatactctgactggcaggataaattgtttatgttcctgggcaccgtcatg
gccatagctcatggatcaggtcttcccctcatgatgatagtctttggagaaatgacagat
aagtttgtagataatactgggaacttttccttgccagtgaatttttcattgtcaatgcta
aatccaggaagaattctggaagaagaaatgactagatacgcatactactattcgggacta
ggtggcggagtccttgttgctgcctacatccaagtctcgttctggactttggcagctggc
cgacaaataaagaaaatcaggcagaaattttttcatgccatcctccgacaagaaatgggc
tggtttgacatcaagggcaccactgaactcaacacacgtctgacagatgacatctccaaa
atcagtgaaggaattggtgacaaggttggaatgttctttcaagcaatagccacgtttttt
gcaggattcatagtggggttcatcagaggatggaagctcaccctcgtgatcatggccatc
agccccatcctggggctctccacagctgtttgggcaaagatactctcaacgtttagtgac
aaagaactagctgcatacgcaaaagcaggtgccgtggctgaagaggctctgggagccatc
aggacggtgatagctttcgggggccagaacaaagagctcgaaaggtatcagaaacattta
gaaaatgccaaaaagattggaattaaaaaggctatctcagccaacatttccatgggcatt
gccttcttattaatatatgcatcatatgcactggccttctggtatggatccactctggtt
atatcaaaagaatatacaattgggaatgcaatgacagtcttcttctcaatcctcattggg
gctttcagtgtggggcaggctgccccctgtattgatgcttttgctaatgcaagaggagca
gcctatgtgatctttgacattattgataataatcctaaaattgacagtttttcagagaga
ggacacaaaccagacagcatcaaaggaaatttggagttcagtgatgttcatttttcctat
ccatctcgggctaatgtcaagatcttgaagggcctcaacctgaaggtgaagagcggacag
acggtggccctggttggcaacagtggctgtggaaaaagcacaactgtccagctgctgcag
aggctctacgaccccacagagggtacgattagcattgacgggcaagacatcaggaacttt
aacgtcaggtgtctgagggaagtcatcggtgtggtgagtcaagagcccgtactgttctct
accacgatcgctgaaaatatccgctatggccgtgggaacgtaacgatggatgagattgag
aaagctgtcaaggaggccaatgcctatgacttcatcatgaaactgccccagaaatttgac
accctggttggtgatagaggggcacagctgagtgggggacagaaacagagaatcgccatt
gcccgggccctggtccgcaaccccaagatcctcctgctggacgaggccacgtcagccctg
gacactgaaagtgaagctgaggtgcaggcggctttggacaaggctagagaaggccgaacc
accattgtgatagctcaccgattgtctacagtccggaatgcagatgttattgctgggttt
gaggatggagtcattgtggaacaaggaagtcacagtgagctgatgaagaaggaagggatc
tactgcagactcgttaacatgcagacatcaggaagccagatcctgtcagaagaatttgaa
gttgagctaagtggtgaaaaggctgctggagacgtggccccaaacggctggaaagcacgc
atatttaggaattctacgaagaaaagtcttaaacattcacatcagaatagtctggatgta
gaaaccaatgaacttgatgcaaacgtgccacctgtgtcttttctgaaggtcttaaaactg
aataagacagagtggccctactttgtggtgggaaccgtctgtgccattatcaatggggcc
ctccagccggctttctccatcatcctgtctgagatgatagctatcttcggccctggggat
gacgcagtgaagcagcaaaagtgtaacatgttctcgctggtcttcttgggcctaggagtc
ctctccttctttactttcttccttcagggcttcacgtttgggaaagctggagagatcctc
accacaaggctccggtccatggcctttaaagcaatgctaaggcaggacatgagctggttt
gatgatcataaaaacagtactggtgcactttctacaagactcgccacagatgctgcgcaa
gtccaaggagccacgggaaccaggttggctttaattgcacagaacacagccaacctcgga
accggtattattatatcatttatttacggttggcaactgacacttctgctgttgtcggtt
gttccattcattgctgtagcaggaattgttgaaatgaaaatgttggctggcaatgccaag
agagataaaaaggaaatggaagctgctggaaagattgcaacagaggcaatagaaaatatt
cgaactgttgtatccttgacccaagaaagaaaatttgagtcaatgtatgttgaaaaattg
catgggccttacaggaattcagtgcggaaggcacacatctatggcatcacttttagcatc
tcacaagcattcatgtacttttcttatgctggctgttttcgatttggttcttacctaatc
gtgaatggacatatgcgattcaaagatgtcattctggtgttttccgcaattgtgcttggc
gcggtggctctaggacacgccagctcatttgctccagactatgcaaaagccaagctatct
gcagcttacttgttcagcctgtttgaaagacaacctctgattgacagctacagcagagaa
gggctgtggcctgataagtttgaaggaagcatcacgtttaatgaagtcgtgttcaactat
cccacccgtgccaatgtgccagtgcttcaggggctgagcctcgaggtgaagaagggacag
acgctggccctggtgggcagcagtggctgtgggaagagcacagtggtccagctgcttgag
cgcttctacgaccccatggccggatcagtgctcctagatggtcaagaagcaaagaaactc
aatgtgcagtggctccgagctcaactgggcattgtgtcccaggaacccatcctgtttgac
tgcagcatcgcagagaacattgcttacggagacaacagccgggctgtgtctcatgaggag
attgtgagggcggccaaggaggccaacatccaccccttcattgagacgctgccccaaaaa
tatgacacaagagtaggagacaaaggcacacagctctctgggggccagaagcagaggatt
gccatcgcccgagccctcatcagacagcctcgggtcctactgctggatgaagccacgtca
gctctggatactgagagcgaaaaggttgtccaggaagcgctggacaaagccagggaaggc
cgcacctgcattgtgatcgcgcaccgcctgtccaccatccagaatgcagacttgatcgtg
gtgattgagaacggcaaggtcaaggagcacggcacccaccagcaactgctggcgcagaag
ggcatctatttctcaatggtcaacatccaggccggcacacagaacttatga
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integrated database retrieval system
