Mus pahari (shrew mouse): 110316214
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Entry
110316214 CDS
T05929
Symbol
Clstn3
Name
(RefSeq) calsyntenin-3 isoform X1
KO
K22661
calsyntenin 3
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mpah04515
]
110316214 (Clstn3)
Cell adhesion molecules [BR:
mpah04515
]
Cadherins
Cadherin related
110316214 (Clstn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
110316214
NCBI-ProteinID:
XP_021045983
Ensembl:
MGP_PahariEiJ_G0022600
LinkDB
All DBs
Position
2:complement(139559820..139592443)
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AA seq
957 aa
AA seq
DB search
MTLLLVSLLLASLLQISSGNKANKHKPWIEAEYQGIVMENDNTVLLNPPLFALDKDAPLR
YAGEICGFRLHGSGVPFEAVILDKATGEGLIRAKEPVDCEAQKEHTFTLQAYDCGEGPDG
TNTKKSHKATVHVRVNDVNEFAPVFVERLYRAAVTEGKLYDRILRVEAIDGDCSPQYSQI
CYYEILTPNTPFLIDNDGNIENTEKLQYSGEKLYKFTVTAYDCGKKRAADDAEVEIQVKP
TCKPSWQGWNKRIEYAPGAGSLALFPGIRLETCDEPLWNIQATIELQTSHVAKGCDRDNY
SERALRKLCGAATGEVDLLPMPGPNANWTAGLSVHYSQDSSLIYWFNGTQAVQVPLGGPA
GLGSGPQDGFSDHFTLSFWMKHSVTPSKGKKEEETIVCNTVQNEDGYSHYSLTVHGCRIA
FLYWPLLESARPVKFLWKLEQVCDDEWHHYALNLEFPTVTLYTDGISFDPALIHDNGLIH
PPRREPALMIGACWTEEKNKEKEKGGENSTDTTSGDPLLIHHYFHGYLAGFSVRSGRLES
REVIECLYACREGLDYRDFESLGKGMKVHVNPSQSLLTLEGDDVETFNHALQHVAYMNTL
RFATPGVRPLRLTTAVKCFSEESCVSIPEVEGYVVVLQPDAPQILLSGTAHFARPAVDFE
GPEGVPLFPDLQITCSISHQVEAKADESWQGTVTDTRMSDEIVHNLDGCEISLVGDDLDP
ERESLLLDMASLQQRGLELTNTSAYLTIAGVETITVYEEILRQARYQLRHGAVLYARKFR
LSCSEMNGRYSSNEFIVEVNVLHSMNRVAHPSHVLSSQQFLHRGHQPPPEMAGHSLASSH
RNSMVPSAATLIIVVCVGFLVLMVILGLVRIHSLHRRVSGTGGPAGASTDPKDPDLFWDD
SALTIIVNPMESYQNQQSCVAGAVGGQQEEEDSSDSEAADSPSSDERRIIESPPHRY
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaccctcctgctggtgtcccttttgctggcctctctgcttcagatcagctctggcaac
aaagccaacaagcacaagccatggatcgaggcagagtaccagggcattgtcatggagaat
gacaacacggttctgttgaacccaccactctttgccttggataaagatgctccgctccgc
tacgcaggtgagatctgtggtttccggctccatggatccggggtacccttcgaggctgtg
atcctggacaaggcaacgggtgaagggctgatccgggctaaggagcccgtggactgtgag
gcccagaaggagcacacctttaccctccaggcttatgactgtggcgagggacccgatggc
accaataccaagaagtctcacaaggcaaccgtgcatgttcgggtcaacgacgtgaacgaa
tttgccccggtctttgtggagcgtctgtaccgagctgcagtgaccgaggggaagctgtat
gatcgtatcttacgtgtggaagccattgatggagactgctctccacagtacagccagatc
tgctactatgagatccttacgcccaacacccccttcctcatcgacaatgatggcaacatt
gagaacacagagaagctacagtacagtggtgagaaactctacaagttcacagtgacggcg
tatgactgtgggaagaagcgggcggcagatgatgccgaggtggagatccaggtgaagccc
acctgcaaacccagctggcaaggctggaacaaaaggatcgaatatgccccaggagccggg
agcttggctttgttccctggcatccgtctggagacctgtgatgagccactgtggaacatt
caggccaccatagagctgcagaccagccatgtggccaagggctgcgaccgagacaactac
tcagagagggctctacggaagctctgtggtgctgctactggggaggtggacctgttgccc
atgcccggccccaacgccaactggacagcagggctgtcggttcactacagccaggacagc
agcctcatctactggttcaatggcacgcaagctgtgcaagttcccctgggtggtccagca
gggctgggctctgggccgcaggatggcttcagtgaccactttaccctgtccttctggatg
aagcatagcgtgactcccagcaaggggaagaaggaggaggagaccattgtgtgtaacaca
gtccagaatgaggacggctactctcactactcactgactgtccacggctgcagaatcgcc
tttctctactggccattgcttgagagtgctcgtccggtcaagttcctctggaagttggag
caggtgtgtgacgatgaatggcatcactacgccctgaacctcgagttccccacggtcaca
ctgtatactgacggcatctcctttgacccggctctcatccacgacaatggtctcatccac
ccacccaggagggaacctgcgctcatgattggggcctgctggactgaagagaagaacaaa
gagaaggaaaaggggggagagaacagtacagacacaacctcaggagaccccttgctgatc
caccactacttccatggctacctagctggtttcagcgtgcgctcaggtcgcctggagagc
cgtgaggtcatcgagtgcctctatgcatgtcgggaggggctggactatagggatttcgag
agcctgggcaaaggcatgaaggtccacgtgaacccctcgcagtccctgctcaccctggag
ggggatgatgtggagaccttcaatcatgccctgcagcatgtggcttacatgaacactctg
cgctttgccacacccggcgtcaggcccctgcgcctcaccaccgctgtcaagtgctttagt
gaagagtcctgtgtctccatccctgaagtggagggctatgtggtggttcttcagcccgat
gcgccccagatccttctgagtggcacagctcattttgcccgcccagctgtggactttgag
ggacccgagggagtccccttgttccccgatcttcagatcacctgctccatttctcaccag
gtggaggccaaagcagatgagagttggcagggcacagtgacagacacacgcatgtcagat
gagattgtacacaacttggacggctgtgagatttctctggtgggggatgacctagaccct
gaacgagagagcctgcttttggacatggcttccctgcagcagcgaggcctggaactcacc
aacacatccgcctacctcaccattgctggggtggagaccatcactgtgtatgaagagatc
ctgaggcaggctcgttatcagcttcggcacggagccgtcctttatgccaggaaattccga
ctttcttgctcggagatgaacggccgatactccagtaacgaattcattgtggaggtcaac
gtcctacatagcatgaaccgggtggcccatcccagccatgtgctaagttcacagcagttc
ctgcaccggggtcaccagcctcctcctgagatggctggacacagcctggccagctcccac
cggaactccatggtccccagtgctgcgactctcatcattgtggtatgcgtgggctttctg
gtgcttatggttatccttggcctcgttcggatccactcccttcatcgccgcgtctcagga
actggcggacctgcaggggcttccactgacccgaaagaccctgacctcttctgggatgac
tctgctcttaccattatcgtcaatcccatggaatcgtaccagaaccagcagtcctgtgtg
gcaggggcggttggtggccagcaagaggaagaggacagcagtgactccgaagcagccgac
tcccccagcagcgatgagagacgcatcattgagagccccccacaccgctactga
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