Mus pahari (shrew mouse): 110316252
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Entry
110316252 CDS
T05929
Symbol
Nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mpah03009
]
110316252 (Nop2)
Enzymes [BR:
mpah01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
110316252 (Nop2)
Ribosome biogenesis [BR:
mpah03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
110316252 (Nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NOP2_rpt
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
FtsJ
PCMT
Methyltransf_25
FTA4
TRM5-TYW2_MTfase
Methyltransf_15
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
110316252
NCBI-ProteinID:
XP_021046051
Ensembl:
MGP_PahariEiJ_G0022630
LinkDB
All DBs
Position
2:140251611..140264776
Genome browser
AA seq
798 aa
AA seq
DB search
MGRKLDPTKKEKRGPGRKARKQKGAETELVRFLPAAGDESSKRLSSRARKRAAKRRAGSV
DVPKPNKSFGIKTLPGELSKGAAQARGKKRPAPIQNSDGDEEEDSGEDDVVTQGDLWGSE
DSGEDMVDDYGAASNSEDEEEEEELLPIERAALKQKAQDPAAAGVQWSEEDTDEDDDGVS
PESHPRKDDKTEGDLQINVEDEEAFVLPPAGETDQDGQAPDLQQVHKRIQDIVGVLRDFG
AQREEGRSRAEYLSRLQKDLATYYSYGDFLLSKLMELFPLSELIEFLEANEVPRPITLRT
NTLKTRRRDLAQALINRGVNLDPLGKWSKSGLVVYDSSVPIGATPEYLAGHYMLQGASSM
LPVMALAPQEHERILDMCCAPGGKTSYIAQLMKNTGVILANDANAERLKSVVGNLHRLGV
TNTIISHYDGRQFPKVVGGFDRVLLDAPCSGTGVISKDPAVKTNKDEKDIQRCAHLQKEL
LLSAIDSVNAASKTGGYLVYCTCSITVEENEWVVDYALKKRNVRLVPTGLDFGQEGFTRF
RERRFHPTLRSTRRFYPHTHNMDGFFIAKFKKFSNSIPQPHAGNSAAATPAEPDLKDQVT
PKSEKSSQPTKKAHGAAKAKQQLQRQQHSKKPFQKVNGITKGPGLSTEPSVPDAQVSTRP
GESSQSAGKADVSRKRKRVEKLKQRGPRWKPSKEAAVPKQSAPPRGEDLGTPAVSTPSEI
RASPRSKDCALSLGKAKKKQKGKQQLPEQPTKRPAPLKEDAVPKGPSAPSSSPHSSTRPP
PAKRRKSVTKGSSQSLLS
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcaagttggatcctacgaagaaggagaagcgtgggcccggccgaaaggctcga
aaacagaagggtgcggagactgaactggtcagatttttgcctgcagctggcgatgagagt
tccaagaggctgtcaagccgtgcccggaagcgggcagccaagaggagggcggggtctgtt
gacgtccctaagccaaataagtcttttgggatcaagacattgcctggagagttatccaaa
ggagcagcccaggctcgaggtaagaagcgcccagcaccaattcaaaacagtgatggtgac
gaggaggaagactcgggggaagatgatgtggtgacccagggggacctttggggctctgag
gacagtggtgaagatatggtggatgactatggagccgcctctaactcggaagacgaggag
gaggaggaggagctgttgcctattgaaagagctgccctgaagcagaaggcccaggacccc
gcagcagctggggtccagtggagtgaagaggacactgatgaagatgatgatggtgtgtcc
cctgagtcccaccccagaaaggatgacaaaacagagggggatttgcagattaatgtggaa
gatgaggaagcctttgtgctgcctcctgccggggagacggaccaggatggccaggctcca
gacctacagcaagttcacaagcggatccaggacatcgtgggagtgctgcgggatttcgga
gctcaacgagaagaaggtcggtctcgagctgagtatctgagtcggcttcagaaggacctg
gccacttactattcttatggagacttcctgttgagcaagctcatggagctgttccctctg
tctgagttgatcgagttcttagaagctaatgaggtgccccggccaatcacccttcggact
aacaccttgaaaacccgtcgccgagaccttgctcaggctctgatcaatcgtggggttaat
ctggatccattgggaaagtggtcaaagtctggacttgtggtatatgattcttcagtgcct
attggcgctactcccgagtacctcgctggacactatatgctgcagggagcttccagtatg
ctacctgtcatggccctggcacctcaggagcatgagcggatcttagacatgtgctgtgct
cctggggggaagaccagctacatagctcagctgatgaagaacacaggagtgatccttgcc
aacgatgccaatgcagagcggctcaagagcgtggtgggcaacctgcaccgcttgggagtc
accaacaccatcatcagccactatgatgggcgccagttccccaaggtggtggggggcttt
gatcgagtgctactggatgctccttgtagcggcacaggagtcatctccaaagaccctgct
gtgaagacgaacaaggatgagaaggacatccagcgctgtgcccaccttcagaaggagctg
ctgctcagtgctatcgactcagtcaacgctgcctccaagaccggaggctacctggtctac
tgcacctgttccattacggtggaggagaacgagtgggtggtagactatgccttgaagaag
aggaatgtgcggctggtgcccaccggcctggacttcggccaggaaggctttacccgcttc
cgagagaggcgctttcaccccactctgcgttccacccgacgcttctaccctcatactcac
aatatggacggtttctttatcgccaagttcaagaaattttccaattctattccccagccc
catgcaggaaactcggcagcagctacccctgcagagcctgacctgaaggatcaggtcacc
ccaaagtctgagaagagcagtcagcccaccaagaaagcccatggggctgcgaaggcaaag
cagcagttgcagagacagcaacattccaagaaacccttccagaaggtgaacggcatcacc
aaagggccaggcttgtccactgaaccttctgtcccagatgcccaagtgtccaccaggccc
ggggaaagcagtcaatctgctgggaaagccgacgtgagcagaaaacgaaagagggttgag
aagctgaagcagcggggacctaggtggaagccctccaaggaggctgctgtcccaaagcag
agcgcccctcccaggggcgaggacttgggaacacctgctgtgtcgactccctctgaaatc
cgtgcctccccaaggtctaaggactgtgctctgtcccttgggaaagccaaaaagaaacag
aaaggaaagcagcagttaccagagcagcctaccaagagacctgctcccctgaaggaagat
gccgtccccaagggaccctcagccccctcctcgtctccccacagttccaccaggccccca
ccagcaaaaaggaggaaatctgtgacaaagggcagcagccagtcccttttgtcttaa
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