KEGG   Mus pahari (shrew mouse): 110316306
Entry
110316306         CDS       T05929                                 
Name
(RefSeq) tubulin alpha-3 chain isoform X1
  KO
K07374  tubulin alpha
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04145  Phagosome
mpah04210  Apoptosis
mpah04530  Tight junction
mpah04540  Gap junction
mpah04814  Motor proteins
mpah05010  Alzheimer disease
mpah05012  Parkinson disease
mpah05014  Amyotrophic lateral sclerosis
mpah05016  Huntington disease
mpah05020  Prion disease
mpah05022  Pathways of neurodegeneration - multiple diseases
mpah05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110316306
  09143 Cell growth and death
   04210 Apoptosis
    110316306
  09144 Cellular community - eukaryotes
   04530 Tight junction
    110316306
   04540 Gap junction
    110316306
  09142 Cell motility
   04814 Motor proteins
    110316306
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    110316306
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    110316306
   05012 Parkinson disease
    110316306
   05014 Amyotrophic lateral sclerosis
    110316306
   05016 Huntington disease
    110316306
   05020 Prion disease
    110316306
   05022 Pathways of neurodegeneration - multiple diseases
    110316306
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpah03019]
    110316306
   03036 Chromosome and associated proteins [BR:mpah03036]
    110316306
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:mpah04812]
    110316306
   04147 Exosome [BR:mpah04147]
    110316306
Messenger RNA biogenesis [BR:mpah03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110316306
Chromosome and associated proteins [BR:mpah03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     110316306
Cytoskeleton proteins [BR:mpah04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    110316306
Exosome [BR:mpah04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110316306
  Exosomal proteins of other body fluids (saliva and urine)
   110316306
  Exosomal proteins of colorectal cancer cells
   110316306
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 110316306
NCBI-ProteinID: XP_021046169
Ensembl: MGP_PahariEiJ_G0022810 MGP_PahariEiJ_G0022811
LinkDB
Position
2:160169397..160191425
AA seq 450 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVDSVEAEAEEGEEY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgcgtgagtgtatctctatccacgtggggcaggcaggtgtccagatcggcaatgcctgc
tgggaactgtactgccttgaacatggcattcagcctgacggtcagatgccaagcgacaaa
accattggcgggggggacgactcattcaacacattcttcagtgagacgggagccggcaag
catgtgcccagagcagtgtttgtggacctggagcccactgtggtcgatgaagtacgcacc
ggaacctaccggcagcttttccacccagagcagctgatcactgggaaggaagatgcagcc
aacaattatgctagaggtcattataccattggcaaggagattgttgacctggtcctggac
cggatccgaaaactggccgatctgtgcacgggcctgcagggcttcctcatcttccacagc
tttggaggtggcacagggtctgggttcgcatctctgctgatggagcggctttcagtggac
tatggcaagaagtccaagctggagtttgccatttacccagcgccccaggtttctacagca
gtcgtggagccttacaactccatcctgaccacgcacacgacgctggaacattccgactgt
gctttcatggtggataatgaagccatctatgacatctgccggcgcaacctggatattgaa
cgtcccacatacaccaacctcaatcgtctgattgggcagattgtgtcgtccatcacagcc
tccctgaggttcgatggcgccctgaatgtggacttaacagaattccagaccaacctggtg
ccataccctcggatccacttccccctggcaacctatgccccagtcatctctgctgagaag
gcataccatgagcagctgtcagtggcagaaatcaccaacgcttgcttcgagccagccaat
cagatggtcaagtgtgaccctcgccatggcaaatacatggcctgctgcatgttgtacagg
ggggatgtggttcccaaagatgtcaatgcagctatcgccaccatcaagaccaagcgcacc
atccagtttgtagattggtgcccgactggatttaaggtgggtattaactaccagcctcct
accgtggtccctgggggagacctggctaaggtgcagcgggccgtgtgcatgctgagcaat
accactgccatcgcagaggcctgggcccgcctggaccacaaatttgaccttatgtacgcc
aagcgggcctttgtgcattggtatgtgggagaaggcatggaggaaggggagttctcagag
gcccgggaggacctggcagcactggagaaggattatgaagaggtaggcgtggattccgtg
gaagcagaagcagaagaaggggaggaatactaa

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