Mus pahari (shrew mouse): 110316392
Help
Entry
110316392 CDS
T05929
Gene name
Shh
Definition
(RefSeq) sonic hedgehog protein isoform X1
KO
K11988
sonic hedgehog
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04340
Hedgehog signaling pathway
mpah04360
Axon guidance
mpah05200
Pathways in cancer
mpah05205
Proteoglycans in cancer
mpah05217
Basal cell carcinoma
mpah05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
110316392 (Shh)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
110316392 (Shh)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110316392 (Shh)
05205 Proteoglycans in cancer
110316392 (Shh)
09162 Cancer: specific types
05226 Gastric cancer
110316392 (Shh)
05217 Basal cell carcinoma
110316392 (Shh)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mpah01002
]
110316392 (Shh)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mpah00536
]
110316392 (Shh)
Peptidases and inhibitors [BR:
mpah01002
]
Cysteine peptidases
Family C46: hedgehog family
110316392 (Shh)
Glycosaminoglycan binding proteins [BR:
mpah00536
]
Heparan sulfate / Heparin
Morphogens
110316392 (Shh)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Motif
Other DBs
NCBI-GeneID:
110316392
NCBI-ProteinID:
XP_021046321
Ensembl:
MGP_PahariEiJ_G0021813
LinkDB
All DBs
Position
2
AA seq
437 aa
AA seq
DB search
MLLLLTRCFLVILASSLLVCPGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLGAS
GRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWPG
VKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKA
HIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLRPGDRVLAADDQGRLLYSDFL
TFLDRDEGAKKVFYVIETREPRERLLLTAAHLLFVAPHNDSGPTPGPSALFASRVRPGQR
VYVVAERGGDRRLLPAAVHSVTLREEEAGAYAPLTAHGTILINRVLASCYAVIEEHSWAH
RAFAPFRLAHALLAALAPARTDGGGGSSIPAAQSAAETRGMEPTAGIHWYSQLLYHIGTW
LLDSETLHPLGMAVKSS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctgctaaccagatgttttctggtgatccttgcttcctcgctgctggtgtgc
cccgggctggcctgcgggcccggcagggggtttggaaagaggcggcaccccaaaaagctg
acccctttagcctacaagcagtttattcccaacgtagccgagaagaccctaggggccagc
ggcagatatgaagggaagatcacaagaaactccgaacgatttaaggaactcacccccaat
tacaacccggacatcatatttaaggatgaggaaaacacgggagcagaccggctgatgact
cagaggtgcaaagacaagctaaatgccttggccatctctgtgatgaaccagtggcctgga
gtgaagctgcgagtgaccgagggctgggatgaagacggccatcattcagaggagtctcta
cactatgagggtcgagcagtggacatcaccacgtccgaccgggaccgcagcaagtacggc
atgctggctcgcctggctgtggaagcaggtttcgactgggtctactatgaatccaaagct
cacatccactgctctgtgaaagcagagaactccgtggcggccaaatccggcggctgcttc
ccgggatccgccacagtgcacctggagcagggcggcaccaagctggtgaaggacttacgt
cccggggaccgcgtgctggcggctgacgaccagggccggctgctgtacagcgacttcctc
accttcctggaccgcgacgaaggcgccaagaaggtcttctacgtgatcgagacgcgggag
ccgcgcgagcgtctgctgctcaccgccgcgcacctgctcttcgtggcgccgcacaacgac
tcagggcccacgcccgggccaagcgcgctctttgccagccgcgtgcgccccgggcagcgc
gtgtacgtggtggctgaacgcggcggggaccgccggctgctgccagccgcggtgcacagc
gtgacgctgcgagaggaggaggcgggcgcgtacgcgccactcacagcgcacggcaccatt
ctcatcaaccgggtgctcgcctcgtgctatgctgtcatcgaggagcacagctgggcacac
cgggccttcgcgcctttccgcctggcgcacgcgctgctggccgcgctggcaccggcccgc
acggacggcgggggcgggagcagcatccctgcagcgcaatctgcagcggaaacgaggggc
atggagccgactgcgggcatccactggtactcgcagctgctctaccacattggcacctgg
ctgctggacagcgagaccctgcatcccttgggaatggcggtcaagtccagctga
DBGET
integrated database retrieval system
