Mus pahari (shrew mouse): 110316414
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Entry
110316414 CDS
T05929
Symbol
Smo
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04340
Hedgehog signaling pathway
mpah04360
Axon guidance
mpah05200
Pathways in cancer
mpah05205
Proteoglycans in cancer
mpah05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
110316414 (Smo)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
110316414 (Smo)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
110316414 (Smo)
05205 Proteoglycans in cancer
110316414 (Smo)
09162 Cancer: specific types
05217 Basal cell carcinoma
110316414 (Smo)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
mpah04030
]
110316414 (Smo)
G protein-coupled receptors [BR:
mpah04030
]
Frizzled / Smoothened family
110316414 (Smo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
7tm_2
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
110316414
NCBI-ProteinID:
XP_021046369
Ensembl:
MGP_PahariEiJ_G0021936
LinkDB
All DBs
Position
2:49282033..49305191
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AA seq
793 aa
AA seq
DB search
MAAGRPVRGPELAPRRLLQLLLLVLLGGPGRGAALSGNVTGPGPRSASGSARRNAPVTSP
PPPLLSHCGRAAHCEPLRYNVCLGSALPYGATTTLLAGDSDSQEEAHGKLVLWSGLRNAP
RCWAVIQPLLCAVYMPKCENDRVELPSRTLCQATRGPCAIVERERGWPDFLRCTPDHFPE
GCPNEVQNIKFNSSGQCEAPLVRTDNPKSWYEDVEGCGIQCQNPLFTEAEHQDMHSYIAA
FGAVTGLCTLFTLATFVADWRNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARREIVCR
ADGTMRFGEPTSSETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTTYQPLSGK
TSYFHLLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLIVGG
YFLIRGVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVLITFSCHFYDFFN
QAEWERSFRDYVLCQANVTIGLPTKKPIPDCEIKNRPSLLVEKINLFAMFGTGIAMSTWV
WTKATLLIWRRTWCRLTGHSDDEPKRIKKSKMIAKAFSKRRELLQNPGQELSFSMHTVSH
DGPVAGLAFDLNEPSADVSSAWAQHVTKMVARRGAILPQDVSVTPVATPVPPEEQANLWL
VEAEISPELEKRLGRKKKRRKRKKEVCPLGPAPELHHSAPVPATSAVPRLPQLPRQKCLV
AANAWGTGESCRQGAWTLVSNPFCPEPSPHQDPFLPGASAPRVWAQGRLQGLGSIHSRTN
LMEAELLDADSDF
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggccgctggccgccccgtgcgtgggcccgagctggcgccccggaggctgctgcagttg
ctgctgctggtcctgctggggggcccgggccggggggcggccttgagcgggaacgtgacc
gggcctgggcctcgcagcgccagcgggagcgcgaggaggaacgcgccggtgaccagccct
ccgccgccgctgctgagccactgcggccgggccgcccactgcgagcctttgcgctacaac
gtgtgcctgggctcggcgctgccctacggagccaccaccacgctgctggctggggactcg
gactcgcaggaggaagcgcacggcaagctcgtgctctggtccggcctccggaatgccccc
cgatgctgggcagtgatccagcccctgctgtgtgctgtctacatgcccaagtgtgagaat
gaccgagtggagttgcccagccgcaccctctgccaggccacccgaggtccctgtgccatt
gtggagcgggagcgagggtggcctgactttctgcgttgcacgccggaccacttccctgaa
ggctgcccaaacgaggtacaaaacatcaagttcaacagctcaggccagtgtgaagcaccc
ttggtgcggacggacaaccccaagagctggtacgaggacgtggagggctgtgggatccag
tgtcagaacccactgttcaccgaggccgagcaccaggacatgcacagctacattgcagcc
ttcggggcggtcaccggcctctgcacgctcttcacattggccacctttgtggctgactgg
cggaactccaatcgctaccccgcggttattctcttctatgtcaatgcgtgtttcttcgtg
ggcagcattggctggctggcccagttcatggatggtgcccgccgagagattgtttgccga
gcagatggcaccatgagatttggggagcccacctccagcgagaccctgtcctgtgtcatc
atctttgtcattgtgtactatgccttgatggctggagtagtctggttcgtggtcctcacc
tatgcctggcacacctccttcaaagccctgggcaccacctaccagcctctctcgggcaag
acatcctatttccacctgctcacgtggtcactcccctttgtcctcactgtggcaatcctc
gctgtggctcaggtagatggagactccgtgagtggcatctgctttgtaggctataagaac
tatcggtaccgtgctggctttgtcctggccccgattggcctggtgctcattgtgggaggc
tacttcctcatccgcggggtcatgactctgttctccatcaagagcaaccaccctgggctt
ctgagtgagaaggcagccagcaagatcaacgagaccatgctccgcctgggcatttttggc
ttcctggccttcggctttgtgctcatcaccttcagctgccacttctatgacttcttcaac
caggccgagtgggagcgtagcttccgggactatgtgctatgccaagccaatgtgaccatc
gggctgcctaccaagaagcccattcctgactgtgagatcaagaatcggcccagcctcctg
gtggagaagatcaatctatttgccatgtttggcactggcattgccatgagcacctgggtc
tggactaaggccaccctgctcatctggaggcgcacctggtgcaggttgactgggcacagt
gatgatgaacccaagagaatcaagaagagcaagatgatcgccaaggccttctctaagcgg
cgtgagctgctgcagaacccaggccaggagctctccttcagcatgcacactgtctcccat
gatggacctgtcgcgggtttggcttttgacctcaatgaaccctcagctgacgtctcctct
gcctgggcccagcatgtcaccaagatggtggctcggagaggagccatattgccccaggat
gtgtctgtcaccccggtggcaactccagtgccaccagaagaacaagccaacctgtggctg
gttgaggcagagatctccccagagttagagaagcgtttgggccggaagaagaagcggagg
aagaggaagaaggaggtgtgccccttggggccagcccctgagcttcaccactctgcccct
gttcctgccaccagtgcagttcctcggctgcctcagctgcctcggcagaagtgcctggta
gctgcaaacgcctggggaacaggggagtcctgccgacagggagcctggactctagtctcc
aaccccttctgcccagagcctagtccccatcaagatccatttctccctggtgcctcagcc
ccccgggtctgggctcagggccgcctccaggggctgggatccattcactcccgcactaac
ctaatggaggctgagctcttggatgcagactcggacttctga
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