Mus pahari (shrew mouse): 110316437
Help
Entry
110316437 CDS
T05929
Symbol
Cftr
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah02010
ABC transporters
mpah04024
cAMP signaling pathway
mpah04152
AMPK signaling pathway
mpah04530
Tight junction
mpah04971
Gastric acid secretion
mpah04972
Pancreatic secretion
mpah04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110316437 (Cftr)
09132 Signal transduction
04024 cAMP signaling pathway
110316437 (Cftr)
04152 AMPK signaling pathway
110316437 (Cftr)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110316437 (Cftr)
09150 Organismal Systems
09154 Digestive system
04971 Gastric acid secretion
110316437 (Cftr)
04972 Pancreatic secretion
110316437 (Cftr)
04976 Bile secretion
110316437 (Cftr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mpah02000
]
110316437 (Cftr)
Enzymes [BR:
mpah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
110316437 (Cftr)
Transporters [BR:
mpah02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
110316437 (Cftr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
CFTR_R
ABC_tran
AAA_21
SMC_N
AAA_29
T2SSE
AAA_16
DUF87
AAA_22
NTPase_1
nSTAND3
AAA_30
DO-GTPase2
MMR_HSR1
MeaB
NB-ARC
Motif
Other DBs
NCBI-GeneID:
110316437
NCBI-ProteinID:
XP_021046404
Ensembl:
MGP_PahariEiJ_G0021879
LinkDB
All DBs
Position
2:38714685..38862798
Genome browser
AA seq
1476 aa
AA seq
DB search
MQKSPLEKASFISKLFFSWTTPILRKGYRHHLELSDIYQAPSADSADHLSEKLEREWDRE
QASKKNPQLIHALRRCFFWRFFFYGILLYLGEVTKAVQPVLLGRIIASYDPENKVERSIA
IYLGIGLCLLFIVRTLLLHPAIFGLHRIGMQMRTAMFSLIYKKTLKLSSRVLDKISIGQL
VSLLSNNLNKFDEGLALAHFIWIAPLQVALLMGLLWDLLQFSAFCGLGLLIVLVIFQAIL
GKMMVKYRDQRAAKINERLVITSEIIDNIYSVKAYCWESAMEKMIENLREVELKMTRKAA
YMRFFTSSAFFFSGFFVVFLSVLPYTVINGIVLRKIFTTISFCIVLRMSVTRQFPTAVQI
WYDSFGMIRKIQDFLQKQEYKVLEYNLMTTGIVMENVTAYWEEGFGELLEKVQQNNDDRK
HSIDENNLSFSHLCLVGNPVLKNIGLNIEKGEMLAITGSTGSGKTSLLMLILGELEASEG
IVKHSGRVSFCSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLQQDITKFAEQDNTV
LGEGGVTLSGGQRARISLARAVYKDADLYLLDSPFGYLDVFTEEQVFESCVCKLMANKTR
ILVTSKMEHLKKADKILILHQGSSYFYGTFSELQSLRPDFSSKLMGYDTFDQFTEERRSS
ILTETLRRFSVDDSSAPWNKPKQSFRQTGELGEKRKNSILNSFSSARKISIVQKTPLCID
GESDDLQEKRLSLVPDSEQGEAALPRSNMIATGPTFPGRRRQSVLDLMTFTPNSGPANLQ
RTRTSIRKISLAPQISLNEVDVYSRRLSQDSTLNITEEINEEDLKECFLDDVIKIPPVTT
WNTYLRYFTLHKGLLIVLIWCVLVFLVEVAASLFVLWLLKNNPVNSGNNGTKISNSSYVV
IITSTSFYYIFYIYVGVADTLLALSLFRGLPLVHTLITASKILHRKMLHSILHAPMSTFS
KLKAGGILNRFSKDIAILDDFLPLTIFDFIQLVFIVVGAIIVVSALQPYIFLATVPGLVV
FILLRAYFLHTAQQLKQLESEGRSPIFTHLVTSLKGLWTLRAFRRQTYFETLFHKALNLH
TANWFMYLATLRWFQMRIDMIFVLFFIVVTFISILTTGEGEGTAGIILTLAMNIMSTLQW
AVNSSIDTDSLMRSVSRVFKFIDIQTEESMYTEIMKELPREGSSNVLVIKNEHVKKSDIW
PSGGEMVVKDLTVKYMDDGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRMLNIK
GDIEIDGVSWNSMTLQEWRKAFGVITQKVFIFSGTFRQNLDPNGKWKDEEIWKVADEVGL
KSVIEQFPGQLNFTLVDGGYVLSHGHKQLMCLARSVLSKAKIILLDEPSAHLDPITYQVI
RRVLKQAFAGCTVILCEHRIEAMLDCQRFLVIEESNVWQYDSLQALLSEKSIFQQAISSS
EKMRFFQGRHSSKQKPRTQITALKEETEEEVQETRL
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagtcgcctttggagaaagccagctttatctccaaactcttcttcagctggacc
acaccaattttgaggaaagggtacagacaccacttggagttgtcagacatataccaagcc
ccttctgctgattcagctgaccacttgtctgaaaagctagaaagagaatgggacagagaa
caagcttccaaaaagaatccccagcttatccatgctcttcggcgatgctttttctggaga
ttcttcttctatggaattttgctatacctaggggaagtcaccaaggctgtccagcctgtc
ttgctaggaagaatcatagcatcctatgatccagaaaacaaggtggaacgctccattgcc
atttacctaggcataggcttatgccttctcttcattgtcaggactctgcttctgcaccca
gctatttttggccttcatcgcattggaatgcagatgagaacagctatgtttagcttgatt
tataagaagactttaaagttgtcaagccgcgttcttgataaaataagtattggacaactt
gttagtcttctttccaacaacctgaacaaatttgatgaaggacttgccttggcacatttt
atatggattgctcctttacaagtggctcttctgatggggcttctctgggacttgttacag
ttctcagccttctgtggccttggtttgctgatagtcctggttatttttcaggctatctta
gggaagatgatggtgaagtacagagatcagagagctgcaaagataaatgaaagactcgtg
atcacatcagaaattattgataatatctattctgttaaggcatattgttgggaatcagcg
atggagaaaatgattgaaaacttgagagaggtggaattgaagatgacccggaaggcagcc
tatatgaggttcttcactagctctgccttcttcttttcagggttctttgtagtcttttta
tctgtgcttccctacacagtcatcaacggaatcgtcctacgaaaaatattcacaaccatt
tcattctgcattgtcctgcgtatgtccgtcacacggcaattccccactgctgtacagata
tggtatgattcttttggaatgataagaaaaatacaggatttcctgcagaaacaagaatat
aaagtactggagtataacttaatgaccacaggcatagtcatggaaaatgtaacagcatat
tgggaggagggatttggggaattactggagaaagtacagcaaaacaatgatgacagaaaa
cattccattgatgagaacaatctcagttttagtcatctgtgtcttgtgggaaatcctgtg
ttgaaaaacatcggtttgaatatagagaaaggagagatgttggctattactggatctact
ggatcaggaaagacatctctcctgatgttgattttgggagaactggaagcttcagaagga
attgttaagcacagtggaagagtttcattctgctctcaattttcttggattatgccgggt
actatcaaagaaaatatcatctttggtgtttcctatgatgagtacagatataagagtgtt
gtcaaagcttgccaactacagcaggacatcaccaagtttgcagaacaagacaacacagtt
cttggagaaggtggggtcacactgagtggaggtcagcgtgcaaggatttctttagcaaga
gcagtatataaagatgctgatttgtacctattagattccccttttggatatctagatgtt
tttactgaagaacaagtatttgaaagctgtgtttgtaaattgatggccaacaaaactagg
attttggttacatctaaaatggaacacttaaagaaagctgacaaaatactaattttgcat
cagggcagcagctatttttatgggacattttctgagctacaaagtctacgtccagacttc
agttcgaaactcatggggtatgatacttttgaccagtttactgaggaaagaagaagttca
attctaactgagaccttacgcaggttctcagtagatgattcctctgccccctggaacaaa
cccaaacagtcatttagacagactggagagttgggagaaaaaaggaagaactctattcta
aattcattcagctctgcaaggaaaatttccattgtgcaaaagactccattatgtatcgat
ggagaatctgatgatctccaagaaaagagactgtccctagttccagattctgaacaggga
gaggctgctctgccacgcagcaacatgattgccaccggccccacatttccaggcagaaga
agacagtctgttttggatctgatgacattcacacccaactcaggccccgccaatcttcaa
aggaccagaacttctattcgaaaaatctccttagcccctcagataagcttaaatgaagtg
gatgtatattcaaggagattatcacaagatagcacactgaacatcactgaagaaattaac
gaagaagatttaaaggagtgttttcttgatgatgtgataaagatacccccagtgacaaca
tggaacacatacctacgatattttactctccataaaggcttactgatagtgctgatttgg
tgcgtgctggtttttctggttgaggtggctgcttctttgtttgtgttatggttgcttaaa
aacaaccctgttaacagtggaaacaatggtactaaaatttccaatagctcctatgttgtg
atcatcaccagtaccagtttctattatattttttacatttacgtgggagtggctgacact
ttgcttgccctgagcctcttcagaggtttgccgctggtgcatacgttaatcacagcatca
aaaattttgcacaggaaaatgttacactctattcttcacgcccctatgtcgaccttcagc
aagctgaaagcaggtgggattcttaacagattctccaaagatatagcaattttggatgac
tttctgcctcttaccatatttgacttcattcagttggtgttcattgtggttggagctata
atagtcgtctctgcattacaaccctacatcttcctagcaacggtgccagggctagtagtc
ttcattttactgagggcatacttccttcataccgcacagcagctcaaacaactggaatct
gaaggcaggagtccaattttcacccaccttgttacaagcttaaaaggactctggacactt
cgagccttccgacgccagacttactttgaaacactgttccacaaagctctgaatttgcac
actgccaactggtttatgtatctggcgaccttgcgctggttccaaatgagaatagacatg
atttttgtcctcttcttcattgttgttaccttcatctccattttaacaacaggtgaagga
gaaggaacagctggtattattctaactttagctatgaatatcatgagtactttgcagtgg
gctgtgaactcaagcattgatacagatagtttgatgcgatctgtgagcagagtctttaag
tttattgatatacaaacagaagaaagtatgtatacagagataatgaaagaactacctaga
gaaggatcatctaatgttttagtcattaagaatgagcatgtgaagaaaagcgatatctgg
ccctctggaggcgaaatggttgtcaaagaccttactgtgaaatacatggatgatggaaat
gccatattagagaacatttctttttcaataagtcctggacagagggtggggctcttagga
agaaccggctcaggaaaaagtactttgctgtcagcatttttacgaatgttgaacattaaa
ggtgatatagagattgatggtgtctcatggaattcaatgaccttacaagaatggaggaaa
gcttttggagtgataacacagaaagtatttatcttttctggaacattcagacaaaacctg
gatcccaatggaaaatggaaagatgaagaaatatggaaagttgcagatgaggttggactc
aagtctgtaatagagcagtttcctggacagctcaactttacccttgtggatgggggttat
gtgctaagccatggccataagcagttaatgtgcttggcccgatctgttctcagtaaggct
aagatcatattgcttgatgagcccagtgcccatctagatcccataacataccaagtaatt
cgacgagttctaaaacaagccttcgctggttgcacagtcatcctctgtgaacacaggata
gaagcaatgttggattgtcagcgatttttggtcatagaagagagcaatgtctggcagtat
gactcccttcaggcacttctcagcgagaagagtatcttccagcaggccattagctcctca
gaaaagatgaggttcttccagggccgccactccagcaagcagaagcctcggacgcaaatt
actgctctgaaagaggagacagaagaagaagttcaagaaacccgtctctag
DBGET
integrated database retrieval system
