Mus pahari (shrew mouse): 110316440
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Entry
110316440 CDS
T05929
Symbol
Herc6
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC6
KO
K22372
E3 ISG15--protein ligase [EC:2.3.2.-]
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpah04121
]
110316440 (Herc6)
Ubiquitin system [BR:
mpah04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
110316440 (Herc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
110316440
NCBI-ProteinID:
XP_021046409
Ensembl:
MGP_PahariEiJ_G0022182
LinkDB
All DBs
Position
2:76123719..76191196
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AA seq
1003 aa
AA seq
DB search
MYFSWAAGSLEPQRLKAGTGGVELLQAASGERHSLLLFSNHRVYSCGDNSWGQLGQRREQ
RTERPEPIQALNNLRVDLVSCGKEHSVAVCHKGKVFTWGAGSEGQLGIGEFKEISFMPTK
INALNGIRIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKKFCSQAIPQKVKSLEGI
PLAQVAAGGTHSFALSLTGTSFGWGSNRSGQLALSGNKIKEQIYTPHSIGALKNLSVVYI
SCGYEHTAVLTKEGQVFTFGGNSSGQLQPSPRSGRRGPQLIEGIGGHVSQIECASYHTIA
YVYTTGQVVSLGRGPSHTSSPTHQEAPAENSDITCLLSAEDLVDIEVKDIFAGAHANFVT
TRRISRTRPTSVSIKTLPEIMRLDQSLVKKWRAANKRKDRDNAKREISLIFSSSACLTAS
FLKKRDAGENNFIDVDLKLARDVFKKLTSEKWISSLITTCLKEDLLRDIPYSSPHQEALL
VFLLLPECSIMQDPKNWKTLAFEFAKAIHKMNPQSLAFLRMCWASLEVSSLNILVQMLKK
AIVSQIQVGVPAKQHIINVKVLLEVIKEVHKANCQLPESAFIINELSGIFDFDTDTGRMF
NRDKILVSTESSDVIVFSDFLFVFDLSSKIKLMKYDSYVKLLSEVMASPEKMRSSQSLIL
KVRRSHLVEDTLRQLRQVEDFDLRKNLSVEFINETPPEGLGVSSEFFHCIFEEMTDPKYE
MFMYPEKGSNMWFPVNPKFEKSSYFLFGILCGLSLHNIKVINLPFPLALYKKLLNQKPSL
EDLKELSLLLGRNLQEVLNCEAGDIEELDMYFSIYWDQKDVNLIPNGISVPVNETNKKDY
VSKCVDYIFNISIKTIYEEFHRGFYKVCNWDIIRKFQPEELMTAMIGNATCDWKQFENNS
KYRAGYDKSHPTILLFWKAFHDLTLDEKKKFLLFLTGCDRLHVKGIQNEGIVFRCPETFS
EEDNLRSLTCYSMLDLPKYSSKRRMKEALQVAINSNKGFVSQE
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgtacttcagctgggcagcaggaagcctggagcctcagcgcctgaaggcgggaacaggc
ggcgtagaactcttacaggcggccagcggggaacgccactcgctcctactgttcagcaac
cacagggtgtattcctgtggggacaacagctggggacagctgggccagaggagggagcag
cgcaccgaaaggccagaaccaattcaggcactgaataatctgcgtgttgacctggtgagc
tgtgggaaggaacactctgtggctgtctgtcacaaaggaaaggtcttcacttggggagcc
ggttctgaagggcagctggggattggagagtttaaggaaataagttttatgcctacgaaa
ataaacgctctgaatggcataagaataatccaagtttcctgtggacactaccactcttta
gcattatcagaagatggccacgtgttttcatggggaaggaacagtgaaggacaactgggc
ctggggaagaaattctgttcccaagctatcccacagaaggtgaagtctctggaggggatc
ccactggctcaggttgctgcaggtggcacacacagttttgctctgtctctcacggggaca
tcatttggttgggggagcaacagatctggacagctggctctcagtgggaacaaaattaaa
gaacaaatctacacgcctcattcaattggtgccctgaagaatctgagtgtggtttatatt
agctgtggttatgagcacactgcagtgcttactaaggaggggcaagtgtttacctttgga
ggcaatagctctggacagctgcagcccagccccaggagtgggagaagaggcccacaactt
atagaaggaattggtggccatgtgtcacaaatagagtgtgcaagttatcacaccattgca
tatgtctacaccactggtcaggtggtatctttaggccgtggaccaagtcacacaagcagc
ccaactcatcaggaggcccccgcagagaactctgacattacctgcctgctatctgcagag
gaccttgtggatattgaagtcaaagacatttttgctggagcacacgccaactttgtgaca
actcgtcggatatcacgtactaggcccacgagtgtttccataaaaaccctgccagaaata
atgcgactcgaccagtctctggtaaagaaatggagagcagcaaacaaaagaaaagatcgt
gacaacgccaaaagagaaatcagcttgatattttcatcttctgcttgtttgacagcaagc
tttttgaagaaaagagatgctggagagaataatttcattgatgtggacttaaaactggca
agagatgtcttcaagaagttaacatcagagaaatggatttcttccttgataaccacatgt
cttaaggaggatctgctcagagatattccatacagttctccacatcaagaagctctactg
gtttttcttttgctcccagaatgttccattatgcaggatcctaagaactggaagaccctg
gcatttgaatttgcaaaagccattcataaaatgaatccacagtcattagcattcctgaga
atgtgttgggcatctttggaagtttcttcgctgaacatactggttcagatgctaaagaaa
gccatcgtctctcaaatacaggttggagttccagcgaagcagcatattattaatgttaaa
gttcttttagaagtgataaaagaagtgcataaggctaactgtcaacttccagaaagtgcc
ttcatcataaatgagctttctggcatctttgactttgatacagacacaggaagaatgttc
aatcgggataaaattctggtctctacagaatcctcagatgtcattgttttcagtgatttt
ctatttgtctttgatttgtcatccaaaattaagctaatgaaatatgactcatatgtaaaa
ctgttgtctgaagtcatggcatctccagaaaagatgagatcctcacaatcccttatactg
aaagtcagacgaagtcacctggtggaagacacattgcgtcaattaagacaagtggaagac
tttgaccttaggaagaatctatcggttgaatttattaatgaaactcctcctgagggtttg
ggagtgagttcggagttcttccactgtatatttgaagagatgacagaccccaaatatgaa
atgttcatgtaccctgaaaagggttccaacatgtggtttccagtcaatcccaagtttgag
aagagcagctatttcctatttggaatcttgtgtggactctccctacataacataaaggtt
atcaaccttcctttcccactggctttatacaaaaaacttttgaaccaaaaaccatctttg
gaagacttaaaagaacttagtcttctcttggggaggaatttgcaagaagttctaaattgt
gaggctggtgatattgaagaacttgacatgtatttttctatatactgggatcaaaaagat
gttaatttaattccaaatgggatctctgtgcctgtgaacgaaaccaacaagaaagactat
gtgtctaagtgtgttgattacatttttaacatctctataaagacgatttatgaagaattt
catagaggattttacaaggtgtgtaactgggatataattaggaaattccagcccgaagaa
ctaatgacagcaatgattggaaatgctacttgtgactggaaacaatttgaaaataattca
aagtatagagctggatatgacaaatcacacccaactattctgctgttttggaaagctttc
catgacttaactttggatgaaaagaaaaaattcctcttgtttcttacaggatgtgatagg
ctgcatgtgaaaggcatacagaatgaagggatagtattccggtgtcctgaaaccttcagt
gaagaagataacctaagatcattgacatgttacagtatgctagacctgcctaagtattcc
tcaaagagaagaatgaaggaagcacttcaggttgcaatcaacagtaacaagggatttgtc
tcacaggaatga
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