Mus pahari (shrew mouse): 110316473
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Entry
110316473 CDS
T05929
Symbol
Ltbr
Name
(RefSeq) tumor necrosis factor receptor superfamily member 3 isoform X1
KO
K03159
lymphotoxin beta receptor TNFR superfamily member 3
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04060
Cytokine-cytokine receptor interaction
mpah04061
Viral protein interaction with cytokine and cytokine receptor
mpah04064
NF-kappa B signaling pathway
mpah04066
HIF-1 signaling pathway
mpah04672
Intestinal immune network for IgA production
mpah05166
Human T-cell leukemia virus 1 infection
mpah05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
110316473 (Ltbr)
04066 HIF-1 signaling pathway
110316473 (Ltbr)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
110316473 (Ltbr)
04061 Viral protein interaction with cytokine and cytokine receptor
110316473 (Ltbr)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
110316473 (Ltbr)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
110316473 (Ltbr)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
110316473 (Ltbr)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
mpah04050
]
110316473 (Ltbr)
Cytokine receptors [BR:
mpah04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
110316473 (Ltbr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
110316473
NCBI-ProteinID:
XP_021046473
Ensembl:
MGP_PahariEiJ_G0022638
LinkDB
All DBs
Position
2:complement(140425789..140432523)
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AA seq
415 aa
AA seq
DB search
MRLPGASSPCGLAWGPLLLGLSGLLVASQPQLVPPYRIENQTCWDQDKEYYEPMHDVCCS
RCPPGEFVFAACSRSQDTVCKTCPHNSYNEHWNHLSTCQLCRPCDFVLGFEEVAPCTSDR
KAECRCQPGMSCVYLDNECVHCEEERLVLCRPGTEVEVTDEIMDTDVNCVPCKPGHFQNT
SSPRARCQPHTRCEIQGLVEAAPGTSYSDTICKNPPEPGTMTLLAILLSLVLFLLFTTVL
ACVWTRHPSLCRKLGTLLKRHPEGEESPPCPPPRVNPHFPDLAEPLLPMSGDLSPSPAGP
PTAPSLEEVVLQQQSPLVQARELEAEPGEHSQVAHGANGIHVTGGSVTVTGNIYIYNGPV
LGGTRGPGDPPAPPEPPYPTPEEGSPGPSELSTPYQEDGKAWHLAETETLGCQDL
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgcccggggcctcctctccctgcggcctggcctgggggccactcctgctggga
ctcagcgggcttctggtggcctctcagccccagctggtgcccccatatcgcatagaaaac
cagacttgctgggaccaggacaaggaatactacgagcccatgcacgatgtctgctgctcc
cgctgtcccccaggcgagtttgtctttgcggcgtgcagccgcagccaagatacggtttgc
aagacttgcccccataattcctacaacgaacactggaaccatctctccacctgccagctg
tgccgcccctgcgactttgtgctcggctttgaggaggttgccccgtgcaccagcgatcgg
aaagccgagtgccgctgtcagccagggatgtcctgtgtgtatttggacaatgagtgtgta
cactgtgaggaggagcggctcgtactctgccggcctggcacagaagtcgaggtcacagat
gaaattatggatactgacgtcaactgtgtcccctgtaagccgggacacttccagaacact
tcctcccctcgagcccgctgtcaaccccataccagatgcgagatccagggtctggtagag
gcagctccaggtacctcctactcggataccatctgtaaaaatcccccagagccaggaaca
atgacactgctggccatcctgctgtcgctggtcctctttctgctcttcaccactgtcttg
gcctgcgtctggacgaggcacccgtctctctgcagaaagctgggtactctgctcaagcgg
cacccagagggagaagaatctcccccttgcccccctcccagagtcaacccacatttccct
gacctggcagagccactcctacccatgtctggagacttgtccccatcccctgctggaccc
ccaacggccccctccttggaggaagtggtgctacaacagcagagtcccctagtccaggcc
agggagctggaggctgaacctggggaacatagccaagtggcccacggtgcgaatggcatt
catgtgactggaggctctgtgactgtcaccggcaacatctacatatacaatgggccagtg
ctgggagggacgcggggccccggagaccctccagctccccctgagcctccataccccact
cctgaagagggatcccctggcccttctgagctgtctacaccttaccaggaggatggtaaa
gcttggcatctggccgagacagagacactagggtgccaagacctctga
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