Mus pahari (shrew mouse): 110316681
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Entry
110316681 CDS
T05929
Name
(RefSeq) nuclear pore complex protein Nup50-like
KO
K14295
nuclear pore complex protein Nup50
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03013
Nucleocytoplasmic transport
mpah05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110316681
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
110316681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110316681
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110316681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
NUP50
Motif
Other DBs
NCBI-GeneID:
110316681
NCBI-ProteinID:
XP_021046772
Ensembl:
MGP_PahariEiJ_G0022424
LinkDB
All DBs
Position
2:complement(113018997..113020545)
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AA seq
438 aa
AA seq
DB search
MAKKNAKKEATGRNSQGDAEEEGTFSLASEDVLRNRTIKRAKRRQARPQPDGKGTSKGIK
SLAVPSRRGEFGGGPGEKPQEVLTTRRNPARAAAEPKAALGSVTANEPPSLQHEQISDAQ
TNVHSQQPVSPGLAFSQACAGSVYHRQLTGLNCSVRDWIVKHVNANPFCDLTPVFKQYEK
YLAAIEKQLHSSCGCLSESQPNRGFVAATQPPFLGVATELQPELVTSENTEFMCEKKADS
AQGATSTSCNFGKNVETSVWGSLNSGPMHRVSSATRSSNVSGKGTTRKKPASAKALKIPA
QGSSEEYKGKRDEPPIVLLVEEDEEESAFYCKKCKLFYKRDNEFKEKGVGTLYLKSTANQ
KTRLLVQDTKLGSILLNILIPPDMPCTRMGKNNVLIVCVPDPPLDKKNATVKVTMLIRVK
TSKDADELHKILLEKMDA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaaaaaatgccaagaaggaagccacaggcaggaactcgcaaggagacgccgaa
gaggagggaacattctcactggccagtgaggacgtcctgaggaatagaaccataaagaga
gccaagcggagacaagcccgcccccaacccgatggtaaagggacttccaaagggattaaa
agtttggctgtgccttcccggagaggagaatttggaggtggccctggagagaagccccag
gaagtattgacaaccagaagaaacccagccagggctgcagcagagcccaaggcagctttg
ggttctgttactgcaaatgaacccccctctttgcagcatgagcagatctcagatgcccag
actaatgtccacagtcagcagcctgtctcccctggcctcgctttcagtcaagcctgcgct
gggagtgtctaccacaggcagttgactggcctgaactgctctgtccgagactggatagtg
aagcacgtgaacgccaatccgttctgcgatctgacgcccgtgtttaagcaatatgagaaa
tacttggctgccatcgaaaagcaactccatagcagctgcggctgtctctcggaaagccag
cccaaccggggctttgtggctgccacacagcctcctttcttaggtgttgccactgaacta
cagccagagttggtcacatctgaaaacacagagtttatgtgtgagaagaaagctgactca
gcacaaggagcaacgagtacctcctgtaactttggcaaaaacgttgagacctcagtttgg
ggttccctcaactctggtcccatgcaccgagtttcatcagccaccagaagctccaatgta
agtgggaaaggtaccacccggaagaagccagcgtctgccaaagctctgaagattccagca
caaggcagcagtgaggaatacaaaggtaaaagggacgagccacccatagtgctccttgta
gaagaggatgaagaggagagtgctttctactgcaagaagtgtaaactattttacaagaga
gacaacgaatttaaagaaaaaggtgttggcacgctgtatttaaaatccacagccaatcag
aagacgaggctattagtgcaggatactaagttaggcagcatactcctgaacattctgatc
ccacccgatatgccatgtacccggatggggaaaaataatgtccttatcgtctgtgtaccc
gacccaccgcttgataagaagaacgccaccgtcaaggtcaccatgctaattcgggtaaaa
acaagtaaggatgctgatgagctgcacaaaattttgctggagaaaatggatgcctga
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