Mus pahari (shrew mouse): 110316753
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Entry
110316753 CDS
T05929
Symbol
Taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110316753 (Taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpah03021
]
110316753 (Taf5)
03036 Chromosome and associated proteins [BR:
mpah03036
]
110316753 (Taf5)
Transcription machinery [BR:
mpah03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110316753 (Taf5)
Coactivators
SAGA/TFTC/STAGA complex
110316753 (Taf5)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
110316753 (Taf5)
STAGA complex
110316753 (Taf5)
TFTC complex
110316753 (Taf5)
SAGA complex
110316753 (Taf5)
SLIK complex
110316753 (Taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
PEP5_VPS11_N
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
ABM-like
PROPPIN
Motif
Other DBs
NCBI-GeneID:
110316753
NCBI-ProteinID:
XP_021046850
Ensembl:
MGP_PahariEiJ_G0014539
LinkDB
All DBs
Position
1:158416697..158432848
Genome browser
AA seq
800 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGSGGTPNNGPNGGGGNVAVAAAAGGD
GGTPKPGVAVSAAAPAGAAPAPAAPAEAGAPHDRQTLLAVLQFLRQSNLREAEEALRREA
RLLEEAVAGSGAPGELDGAGAEAASALLSRVTASVPGSAAPDPPGTGASVTSVFSGSASG
PAAPGKVASVAVEEQPDVSAVLSAYNQQGDPTMYEEYYSGLKHFIECSLDCHRAELSQLF
YPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDF
RTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLA
GEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPN
APPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTD
DSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILY
GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF
VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN
CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS
RDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPV
VHLHFTRRNLVLAAGAYSPQ
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagctagagcctgagggaccg
ccgacgctgctacctccgcaggctggcgacggcgcaggcgaggggagcggcggcactcct
aacaacggccccaacggcggcggcgggaatgtggcagtggcggcggcggccggcggggac
ggcgggacccccaagcctggggtggctgtctccgccgctgccccggcgggggcggccccg
gcgcccgccgctccggcggaggccggcgctccccacgaccgacagacccttctggccgtg
ctgcagttcctccggcagagcaacctccgcgaggccgaagaggcgctgcgccgggaggcc
cggctgctggaggaggcggtggcgggctccggagctccaggagagttggacggggccggc
gcggaggcggctagcgcgcttctcagccgggtcaccgcttcagttcccggctccgcggcc
cccgaccctccggggacgggcgcctcggtgacctcggtgttctcgggttccgcctcgggt
cccgcggctccgggaaaggttgcaagtgtagctgtggaagagcagccagacgtgagtgct
gtcttgtcggcctacaaccaacaaggagaccctacaatgtatgaagaatactacagtgga
ctgaaacacttcattgaatgctctctggactgccatcgagcagagctatcccaactcttt
tatcctctgtttgtacatatgtacttggagctagtttataatcaacatgaaaatgaagca
aaatcattctttgagaagttccatggagatcaggaatgttattaccaggatgacctacga
gtattatctagtcttaccaaaaaggagcacatgaaagggaatgagaccatgctggacttt
cggacaagtaaatttgttcttcgcatttcccgtgactcgtaccaactcttgaagcgccat
cttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacattgac
atctttgatgggatgcctcgaagtaagcaacagatagatgccatggtgggaagcttggca
ggagaggcgaagcgagaagcaaacaagtcaaaggtattttttggtttactaaaagaacca
gaaattgaggtgcctttggatgatgaggatgaagaaggagaaaatgaagaaggaaaacct
aaaaagaagaagcctaaaaaggatagtattggctctaaaagcaaaaaacaagatcccaat
gccccgcctcaaaacagaatccctcttcctgagttgaaagattcagacaaactggacaaa
ataatgaatatgaaagaaactaccaaacgagtgcgcctcgggccagactgtttaccttcc
atttgtttctatacattccttaatgcttaccagggcctcactgcagtggatgtcactgat
gactctagtctgattgctggaggttttgctgattcaactgtcagagtgtggtctgtgacc
cctaaaaagctccgtagtgtcaaacaagcatcagatcttagtcttatagacaaagaatca
gatgatgtcttagagagaatcatggatgagaaaactgcaagtgagttgaagattttgtat
ggtcacagtgggcctgtctatggagccagcttcagtccggataggaactacctactctcc
tcttcagaggatggaactgttagactctggagccttcagactttcacttgcttggttggg
tataaaggacacaactacccagtatgggacacgcagttttctccctacggatattatttc
gtgtcaggaggccatgaccgagtagctcggctttgggctacagatcactatcagccttta
aggatatttgctggccatcttgctgatgtgaattgcactagatttcatccaaattcgaac
tatgttgctacgggctctgcagacagaactgtgcggctctgggatgtcctcaatggtaac
tgcgtaagaatcttcactggacacaagggaccaattcattccttgacattttctcccaat
gggagattcctggctacaggagcaacagatggcagagtacttctttgggatattggacat
ggcttgatggttggagaattaaaaggccacactgatacagtgtgttcacttaggtttagt
agagatggtgaaattttggcatcaggttcaatggataatacagtccggttatgggacgcc
atcaaagcatttgaagatttagagactgatgactttactacagccactgggcatataaat
ctacctgagaattcccaggagttattattgggtacatatatgaccaaatcaacaccagtt
gtacacctacattttacaagaagaaacttggttctagctgcaggagcttacagtccgcaa
taa
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integrated database retrieval system
