Mus pahari (shrew mouse): 110317300
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Entry
110317300 CDS
T05929
Symbol
Smarcd3
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03082
ATP-dependent chromatin remodeling
mpah04714
Thermogenesis
mpah05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110317300 (Smarcd3)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
110317300 (Smarcd3)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
110317300 (Smarcd3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpah03021
]
110317300 (Smarcd3)
03036 Chromosome and associated proteins [BR:
mpah03036
]
110317300 (Smarcd3)
Transcription machinery [BR:
mpah03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110317300 (Smarcd3)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110317300 (Smarcd3)
PBAF complex
110317300 (Smarcd3)
GBAF(ncBAF) complex
110317300 (Smarcd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
110317300
NCBI-ProteinID:
XP_021047390
Ensembl:
MGP_PahariEiJ_G0021793
LinkDB
All DBs
Position
2:complement(19161680..19197505)
Genome browser
AA seq
483 aa
AA seq
DB search
MAADEVAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGSPYMGSPAVRPGL
APAGMEPARKRAAPPPGQSQAQGQGQPVPTAPARSRSAKRRKMADKILPQRIRELVPESQ
AYMDLLAFERKLDQTIMRKRVDIQEALKRPMKQKRKLRLYISNTFNPAKPDAEDSDGSIA
SWELRVEGKLLDDPSKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQV
KRPGDLSVRCTLLLMLDYQPPQFKLDPRLARLLGLHTQSRSAIVQALWQYVKTNRLQDSH
DKEYINGDKYFQQIFDCPRLKFSEIPQRLTALLLPPDPIVINHVISVDPSDQKKTACYDI
DVEVEEPLKGQMSSFLLSTANQQEISALDSKIHETIESINQLKIQRDFMLSFSRDPKGYV
QDLLRSQSRDLKVMTDVAGNPEEERRAEFYHQPWSQEAVSRYFYCKIQQRRQELEQSLVV
RNT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggacgaagttgccggaggggcgcgcaaagccacgaaaagcaaactttttgag
tttctggtccatggggtgcgccccgggatgccgtctggagcccgaatgccccaccagggg
gcgcccatgggccccccgggctccccgtacatgggcagccccgcggtacgacccggcctg
gcccccgcgggcatggagcccgcccgcaagcgagcagcgcccccgcccgggcagagccag
gcacagggccagggccagcccgtgcccaccgccccagcgcggagccgcagtgccaagagg
aggaagatggctgacaaaatcctccctcaaaggattcgggagctggtccccgagtcccag
gcttacatggacctcctagcgtttgagaggaaactggatcaaaccatcatgcggaagcgg
gtggacatccaggaggccctgaagaggcccatgaagcaaaagcgaaagctgcgcctttat
atctccaatacatttaaccctgcgaagcccgatgccgaagattctgatggcagcattgcc
tcctgggagctgcgggtagaggggaagctcttggatgatcccagtaagcagaagaggaag
ttttcttccttcttcaagagtttggtcattgagttggacaaagacctttatggcccagac
aaccaccttgttgagtggcaccggacacccacaacccaggaaacagatgggttccaagtg
aagagaccaggggacttgagtgtgcgctgcaccctgctcctgatgctggactaccagcct
cctcagttcaagttggacccccgcttagcccggctgctggggttacacacacagagccgc
tccgccattgtccaggcgctgtggcagtacgtgaagaccaaccggctacaggactcccat
gacaaggaatacatcaatggcgacaagtatttccagcagatttttgactgtccccgcctg
aagttctctgagattccccagcgcctcacagccctgctgctgcctcctgacccgattgtg
atcaaccacgtcatcagcgtggatccatcagaccagaagaagactgcgtgctatgacata
gatgtggaggtggaggagccactgaaggggcagatgagtagcttcctcctgtccacggcc
aaccagcaggagatcagtgctctggacagtaagatccatgagacgattgagtccataaac
cagctcaagatccagagggacttcatgctaagtttctccagagaccccaaaggctacgtc
caagacctgctccgctcccagagccgtgatctcaaggtgatgacagatgtggcgggtaac
cccgaggaagaacggagagccgagttctaccaccagccctggtcccaggaagccgttagc
cgctacttctactgtaagatccagcagcgcaggcaggagctggagcagtcgctggttgtg
cgcaacacctag
DBGET
integrated database retrieval system
