Mus pahari (shrew mouse): 110317366
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Entry
110317366 CDS
T05929
Symbol
Tia1
Name
(RefSeq) nucleolysin TIA-1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpah03019
]
110317366 (Tia1)
03041 Spliceosome [BR:
mpah03041
]
110317366 (Tia1)
Messenger RNA biogenesis [BR:
mpah03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
110317366 (Tia1)
Spliceosome [BR:
mpah03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110317366 (Tia1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
DbpA
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
110317366
NCBI-ProteinID:
XP_021047474
Ensembl:
MGP_PahariEiJ_G0022332
LinkDB
All DBs
Position
2:103398583..103426161
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AA seq
386 aa
AA seq
DB search
MEDEMPKTLYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDTAGNDPYCFVEFHEHRHAA
AALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVFVGDLSPEITTE
DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTN
WATRKPPAPKSTFESTTKQLSYDEVVSQSSPNNCTVYCGGVTSGLTEQLMRQTFSPFGQI
MEIRVFPDKGYSFVRFSSHESAAHAIVSVNGTTIEGHVVKCYWGKETLDMINPVQQQNQI
GYPPPYGQWGQWYGNAQQIGQYVPNGWQVPAYGVYGQPWSPQGFNQTQSSAPWMGPNYSV
PPPQGQNGSMLPNQPAGYRVAGYETQ
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgagatgcccaagactctatacgtcggtaacctttctcgagatgtgacagaa
gctctcatcctccagctctttagccagattggaccttgtaaaaactgcaaaatgattatg
gatacagcaggaaatgacccatactgttttgtggagttccatgagcaccgtcatgcagct
gcagccctggctgccatgaatgggcggaagataatgggtaaggaagtgaaagtgaattgg
gcaacaacccctagcagtcaaaagaaggatacaagcagtagtaccgttgtcagcacacag
cgttcacaagatcatttccatgtgtttgttggtgacctcagtccagaaatcacaactgaa
gacatcaaagcagcttttgcaccatttggaagaatttcagatgcccgtgtggtaaaagac
atggctacagggaagtctaagggatatggctttgtctcctttttcaacaaatgggatgca
gaaaatgccattcaacagatgggtggccagtggcttggtggaagacaaatcagaactaac
tgggcaacccgaaagcctccagctccaaagagtacatttgagtcgaccacaaaacagctg
tcatatgatgaggttgtgagtcagtctagtcccaacaactgcactgtgtactgtggaggg
gtgacgtcaggactgacagaacaactaatgcgtcagactttttctccatttggacaaata
atggaaattcgagttttcccagataaaggatactcttttgttcggttcagttcccatgaa
agtgcagcacacgcgattgtttctgttaatggtactaccattgaagggcacgtggtgaaa
tgctactggggcaaagagactctcgatatgataaaccccgtgcagcagcaaaatcaaatt
ggatatcctccaccatatggccagtggggccagtggtatggaaatgcacaacagattggc
cagtatgtgcctaacggttggcaagtccctgcctatggagtgtatggccagccctggagc
ccgcagggattcaatcagacacagtcttctgcaccgtggatgggacccaattacagtgtg
ccgccgcctcaagggcagaacggcagcatgctgcctaatcagcctgctggatatcgagtg
gccggctatgaaacccagtga
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