Mus pahari (shrew mouse): 110317526
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Entry
110317526 CDS
T05929
Symbol
Psmc4
Name
(RefSeq) 26S protease regulatory subunit 6B isoform X1
KO
K03063
26S proteasome regulatory subunit T3
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03050
Proteasome
mpah05010
Alzheimer disease
mpah05012
Parkinson disease
mpah05014
Amyotrophic lateral sclerosis
mpah05016
Huntington disease
mpah05017
Spinocerebellar ataxia
mpah05020
Prion disease
mpah05022
Pathways of neurodegeneration - multiple diseases
mpah05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
110317526 (Psmc4)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
110317526 (Psmc4)
09164 Neurodegenerative disease
05010 Alzheimer disease
110317526 (Psmc4)
05012 Parkinson disease
110317526 (Psmc4)
05014 Amyotrophic lateral sclerosis
110317526 (Psmc4)
05016 Huntington disease
110317526 (Psmc4)
05017 Spinocerebellar ataxia
110317526 (Psmc4)
05020 Prion disease
110317526 (Psmc4)
05022 Pathways of neurodegeneration - multiple diseases
110317526 (Psmc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mpah03051
]
110317526 (Psmc4)
Proteasome [BR:
mpah03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
110317526 (Psmc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_5
AAA_2
AAA_lid_3
AAA_16
RuvB_N
AAA_22
nSTAND3
DUF815
NPHP3_N
AAA_28
RNA_helicase
Mg_chelatase
AAA_14
TIP49
NTPase_1
ATPase_2
NACHT
AAA_3
IstB_IS21
AAA_7
TsaE
AAA_18
AAA_33
Parvo_NS1
AAA_lid_PRS2_C
AAA_17
AAA_25
NB-ARC
AAA_24
ABC_tran
DUF3450
Motif
Other DBs
NCBI-GeneID:
110317526
NCBI-ProteinID:
XP_021047667
Ensembl:
MGP_PahariEiJ_G0012666
LinkDB
All DBs
Position
1:complement(1070938..1079304)
Genome browser
AA seq
418 aa
AA seq
DB search
MEEIGILVEKIQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEY
IKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTID
RELLKPNASVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREA
VELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYL
GEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFD
QNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDL
EDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEHEFYK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaggagataggcattttggtggagaaaattcaggatgagatcccagcactgtccgtg
tctcggccgcagactggcctgtcctttctgggacccgaacctgaagacctggaggacctg
tacagccgctacaagaagctgcagcaagagctggagttcctggaggtgcaggaggagtat
atcaaggatgagcagaagaacctgaagaaggaattcctccacgcccaggaggaagtaaag
cggatccagagcatccccttggtcatcggtcagtttttggaagctgtggatcagaacaca
gccattgtgggctctactacaggctctaactattacgtgcgcatcctgagtaccatcgat
cgggagctgctcaaacccaacgcctccgtggccttgcacaagcacagcaatgccctggtg
gacgtgctgcctcccgaggccgacagcagcatcatgatgctcacctcagaccagaagcca
gatgtgatgtatgccgatattggaggcatggacatccagaagcaggaggtgagggaggcc
gtggaactcccgcttacgcactttgagctgtacaagcagattggcatcgatcctccccga
ggtgtcctcatgtatggccctcctggctgtggaaagacaatgttagcaaaggctgtggca
catcacacgacagctgcatttatccgtgtggtgggctcagagtttgttcagaagtacctg
ggcgagggcccccgaatggtccgggatgtatttcgcctagccaaggaaaatgcacctgcc
atcatcttcatagatgaaattgatgccattgccaccaagagattcgatgcccagacggga
gctgacagggaggttcagaggatcctgctggagctactgaatcaaatggatggatttgac
cagaacgtcaatgtgaaggtaatcatggccacaaacagagcagacaccttggatccagct
ttgctgcggccaggacgcctggaccgaaaaattgaattcccactccctgaccgtcgccag
aagaggttgattttctccaccatcacaagcaaaatgaacctgtctgaggaggtcgacctg
gaagactatgtggcccgtccagataagatttcaggagccgatatcaactccatctgtcag
gagagtggaatgttggctgtccgtgagaaccgctacattgtcctggccaaggacttcgag
aaagcatacaagaccgtgatcaagaaagatgagcaggaacatgaattttacaagtga
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integrated database retrieval system
