Mus pahari (shrew mouse): 110317542
Help
Entry
110317542 CDS
T05929
Symbol
Sec16a
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mpah04131
]
110317542 (Sec16a)
Membrane trafficking [BR:
mpah04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
110317542 (Sec16a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
ExsD_M
Motif
Other DBs
NCBI-GeneID:
110317542
NCBI-ProteinID:
XP_021047683
Ensembl:
MGP_PahariEiJ_G0024774
LinkDB
All DBs
Position
3:complement(13571232..13609578)
Genome browser
AA seq
2352 aa
AA seq
DB search
MQPPPQAVPSGVAGPPPAGNPRSMFWANSPYRKPASNNAPVAPITRPLQPVTDPFAFNRQ
TLQNTPVGSSSKSSLPNLPGPALSVFSQWPGLPVTPTNAGDSSTGLHEPLSGTLSQPRAD
TSLFPPASTPSSLPGLEVSRNAEVDPNSGHEVQMPPHPPPYIPGVGPEQPHGGQMNDSGS
GPDQPENRHAPHDGAVTHAPSPFLPQPQMPGQWGPAQGGPQPSYQHHSPYLEGPVQNMGP
QAASLPHFPPPSSLHQGPGHESHVPQTLTPASLTSGEGNEIVHQQSKNHPLSSFPPKHTF
EQNSRVGNMWASPELRQNPGVNKEHLLDPAHVSPFTQGNSPENQAHHPPGAATNPALQEA
ASGALSMFFQGEETENEENLSSEKAGLDNRLDLDSFSSTSRLGRPPPPGASGVYQAFPRG
PSGEAAQEGDEQPYFSQSVGIRLDKQTTMTPANDTWGDLPGAGTHRANGPQCENVENLEF
VQNQEVLPRETLSVDPFPLSDHIRYGPLPGPAASRPVTVGLTRGGGLNLEAPDTPLHPTR
PDSVSSSYSSHSHRSPPGSARPQELVGTFIQQEVGKLEDDTSGSFFKQIDSSPVGGETDE
VTGSQTCCSTLSQPSTPSPPKPTGVFQTSANSSFEPVKSHLVGVKPVEADRANMVVEVRG
TRYCPKKRRAAVAPPDATPGNLEQPPDNMETPCAPQACPLPLSTTGEAGQLVSHTVGSPL
DTVRPVPDKRPSARAQGPVKCESPATTLWAQNELPDFGGNVLLAPAAPALYVPVKPKPSE
VVHHTEKGMSGQQSWQQGSMPPLQNQDPPGASENLENPPKVGEEEAPPLQASSGYASLLS
SPPTESLHNQPVLIAQPDQSYNLAQPINFSVSLLNPNEKNQSWGDAVVGEKSIVSNNWAL
SGDPEEHAALSGVPATAVTGSSLPSSIPQNCAPQGSGSSEMIASQPASWLVRQLTPQIPQ
SQHPNAEKGPSEFVSSPAGNTSVMLVPPANSTLVPNNNKANHFSNQEEAVGALDFTLNRT
LENPVRMYSPSHSHGPASQQPLPNHPRQSGPGLHNQDHFYQQVTEDAQRQCRLERAQPEL
VPPQPQNSPQAPQAACPEPSNPESPPTQGQSESLAQPPASPAPGNTGQLLPQPPQSSSAS
VTSANSSQAAVRSEQPWLHPPPPNTFGPAPQDLASYYYYRPLYDAYQSQYPSLYPSDPGT
ASLYYQDMYGLYEPRYRPYDSSASAYAENHRYSEPERPSSRASHYSDQLAPRQGYPEGYY
NPKSGWSSHSDYYANYYSGQYDYGDPSRWDRYYGSRFRDPRTWDRRYWYDSEHDPYKKDH
YAYSDRPEKCDDHWRYDPRFTGSFDDDAELHRDPYGEEADRRSIHSEHSARSLRSTHSLP
SRRSSLSSHSHQSQIYRSHHVTGGSFEAPHAPGSFHGDYAYGTYASNFSGAHGFPEYSYP
ADTSWPAVEQVPSRPTSPEKFTVPHVCARFGPGGQLLKVIPNLPSEGQPALVEIHSLETL
LQHTPEQEEMRSFPGPLGKDDTHKVDVINFAQNKATKCLQNESLIDKESASLLWKFIILL
CRQNGTVVGTDIAELLLRDHRTVWLPGKSPNEANLIDFTNEAVEQVEEEESGEAQLSFLT
DSQTVTTSVLEKETERFRELLLYGRKKDALESAMKNGLWGHALLLASKMDSRTHARVMTR
FANSLPINDPLQTVYQLMSGRMPAASTCCGDEKWGDWRPHLAMVLSNLNNNMDVESRTMA
TMGDTLASKGLLDAAHFCYLMAQVGFGVYTKKTTKLVLIGSNHSLPFLKFATNEAIQRTE
AYEYAQSLGAHTCSLPNFQVFKFIYLCRLAEMGLATQAFHYCEVIAQSVLTQPGAYSPVL
ISQLTQMASQLRLFDPQLKEKPEEESFVEPAWLVQLQHIERQIQEGTVLWSQDGTEPQQC
RITSGSEVEQSDGPGLNQQAGPRADNPLLMPSTEPLMHGVQLLPTVPHTLPDGQPAHLSR
VPMFPVPMSRGPLELSPAYGPPGSALGFPESSRSDPAVLHPGQALPPTTLSLQESGPPPQ
EAKSPDPEMVPRSSPVRHSPPELSQEEFGESFADRGSSRTAQDLGTAPVWDLGSSSGTPD
SEGKKPAQAVKKEPKEPKKTESWFSRWLPGKKRTEAYLPDDKNKSIVWDEKKNQWVNLNE
PEEEKKAPPPPPTSFPRVPQVTPTGPAGPPTASVNVFSRKAGGSRARYVDVLNPSGTQRS
EPTLAPADFFAPLAPLPIPSNLFVPNPDAEEPQPADGTGCRGQATAGTQSKAEPTLEPKV
VSSTVSAPGPELLPSKPDDSQGGEAPGDHSPGGASPGGSVPFYNPAQLVQASVTSGNSRP
GRIGQRKYAALN
NT seq
7059 nt
NT seq
+upstream
nt +downstream
nt
atgcagccaccacctcaggcagtcccatctggtgtggctggaccacccccagctgggaat
cctcggagcatgttctgggccaacagcccttacaggaagccagccagtaataatgcacca
gtggctcccataacacgcccattgcagccagtaacggatccgtttgcttttaatagacag
actcttcaaaacacaccagtgggaagttcatccaaaagcagcctgcccaatttgcctggc
ccagccctctctgttttttctcagtggcctggtttgcctgtgactcccacaaatgctggg
gatagctccacaggactgcatgagcctctgtcaggaactctgtcacagcctagagcagat
accagtctatttcctcctgcatctaccccttcttcactgcctgggctagaggtgagcagg
aatgctgaggttgatcccaactcaggacatgaagtccagatgccgccacatccacctccc
tacattccaggagttggtcctgagcagcctcacgggggccaaatgaacgacagtgggtct
ggacccgaccaacccgagaataggcatgccccacatgatggtgctgtgacccacgcacca
tctcctttcctccctcagccacagatgccaggtcagtgggggcctgcacaaggaggccct
cagccctcctatcagcatcactcaccctacctggaggggcctgttcagaacatggggccc
caggctgccagcttgcctcatttcccccctccatctagtctacaccagggacctggccat
gagtctcatgtcccacagacattgactccagcatccttgaccagtggcgaagggaatgag
atagtccaccagcaaagtaaaaatcatccattgagtagcttccccccgaaacacactttt
gagcagaattccagagttgggaatatgtgggcaagcccagagttgaggcagaatccagga
gtgaataaagagcatctgctagaccctgcccatgtcagtcccttcactcagggaaatagt
cctgaaaaccaggcacaccatcccccaggagctgcaaccaaccctgccctgcaagaagca
gcctctggagctctctcaatgttttttcaaggggaggagacggagaacgaggaaaatctc
tcgtctgaaaaagcaggccttgataacagattggacttggacagcttctcttctacctcc
agactgggccgtccaccaccacctggagctagtggtgtctaccaggcctttcccagaggt
cctagcggcgaggctgcgcaggaaggagatgagcaaccttatttttctcagtctgtgggc
atccgtcttgacaaacagaccactatgacccctgctaatgatacatggggtgatcttcct
ggtgctgggacccaccgtgctaatgggccacagtgtgagaatgttgagaacttagaattt
gttcagaatcaagaagttttgccacgtgagaccctgagtgtggatccctttcctctgagt
gatcacatccgatatgggccccttcctgggccagctgcctccaggcctgttactgtgggc
ctcaccagaggtggggggctaaatcttgaggcccctgacacaccactccaccctacacga
cctgacagtgtgtcatccagctacagtagccatagccacagaagtcctcctgggtcagcc
agaccccaagaattagtgggcacattcattcagcaagaagttggaaaacttgaagatgat
acttcagggagtttttttaagcaaattgattcttctcctgttggaggtgagacagatgag
gtgactgggagccaaacttgctgcagcactctgtcccagccttcaaccccaagccctccg
aaacccacaggagtgttccaaacaagtgcaaacagttcttttgagccagtaaaatcccac
ttggttggagtgaaaccagttgaagcagatcgtgccaacatggtggttgaagtgagaggg
acccgatactgcccgaagaagcgcagggcagctgttgcaccacctgatgccaccccagga
aacctggaacagccaccagacaacatggagaccccgtgtgcacctcaggcctgccctttg
cctcttagcaccactggagaggctgggcaactggtttcacacacagtagggtcacccctg
gatactgtgcgcccagtacctgataagaggccctcagccagggcccaggggcctgtgaag
tgtgagagcccagcaacaactctgtgggcacaaaatgagctgccagattttggtggcaat
gtccttctagcccctgctgcccctgcactttatgttcctgtaaaaccaaaaccttcagag
gttgttcatcatacagaaaagggaatgtctggacagcagtcatggcaacaagggtctatg
ccacctttgcagaaccaagaccctcctggtgcttctgagaaccttgagaaccctcccaag
gtaggagaagaggaggcccctccattgcaggcaagttctggttatgcgagtttgctttcc
tcgccacccactgaatctttgcacaatcaacctgtcctgattgcccagcctgatcaaagc
tataatttggctcagcccattaatttttctgtgtccttactgaatcctaatgagaagaat
cagtcctggggagatgctgtggtgggggagaaatccatagtgagcaacaactgggctctc
agtggtgatcctgaagaacatgctgctttgtctggagttccagccactgctgtcactggc
tcatctttgcctagcagtatcccccagaattgtgcccctcaaggttctgggtcttctgaa
atgattgctagccagcctgccagttggttggttcgacagctaacccctcaaatccctcaa
agtcagcatcctaatgcagaaaagggtccttccgagtttgttagtagccctgctggaaat
acaagtgtgatgctagttccacctgcaaacagtactttggtacctaacaataataaggca
aatcactttagtaaccaggaagaagctgttggcgccctagacttcacattaaatagaact
ttggaaaatcctgtgagaatgtatagcccatctcattcacatggcccagcttctcagcag
cctcttcccaatcatcccagacagtctgggcctgggctgcataaccaggatcatttctac
cagcaggtaacagaagatgctcagcgccagtgtagactagaaagagcccagccagagctg
gtgcctcctcagccacagaattctccccaagcgccccaagcagcgtgtccagagccttca
aatccagaaagcccacccacacaaggacagtctgaaagcttggcccagccaccagcaagt
ccagctccaggcaacacaggccagctgctgcctcagccaccgcagtcttccagtgcatcg
gttacatctgccaactccagccaggcagctgtgcggtcagagcagccgtggctacaccca
ccacctcccaatacttttggcccagcacctcaagacttggcatcctactactattacaga
cccctgtatgatgcctaccagtctcagtacccttcactgtacccgtcagatcctgggaca
gcctcactatactaccaggatatgtatggcctgtatgagcctcgttacagaccctatgac
agctcagcatctgcttatgccgagaaccaccgctattctgagcctgagcggcccagctcc
cgtgcaagtcactattccgaccagctcgctcccaggcaaggatatcctgaaggatactat
aatcccaagagtggatggagcagtcacagtgattactatgcaaattattactctggccag
tatgattatggagaccccagccgctgggatcgttactatgggtctcgctttagggaccct
cgcacctgggaccggaggtactggtatgactctgaacatgacccatacaagaaggaccac
tatgcttacagtgacaggcctgagaaatgtgatgatcactggaggtatgaccctcgcttc
accgggagcttcgacgatgacgctgagctccacagggacccctacggagaagaagcagac
agacgcagcatccacagcgagcactcggcacggagcctgcgcagcactcacagtctgccc
agccgccgcagcagcctcagctcccattcacaccagagtcagatttacagaagccaccat
gtgactggcggttcctttgaggcccctcatgccccaggctcatttcatggtgattatgcc
tatggcacatatgccagcaatttcagcggtgcccatggttttcctgagtacagctaccct
gcagacacttcctggcctgctgtggagcaagttccatcaagaccgacctctcctgagaag
tttacagtgcctcatgtctgtgccaggtttggtcctggtggtcagctccttaaagtgatt
cccaaccttccttcagaaggacagcctgcactggtggagatccacagcttagagaccttg
ctgcagcacacacctgagcaggaagagatgcgttccttcccaggacctctcggcaaagat
gatacccacaaagtagatgttattaactttgcacagaacaaagcaacaaaatgtttgcag
aatgaaagtttaattgacaaagagtctgcaagtcttctttggaaattcattattctgtta
tgcagacagaatgggactgttgtgggaacagacattgccgagcttttgttacgggaccat
agaactgtatggcttcctgggaagtcacccaatgaggcaaacctgatagattttaccaat
gaggctgtggaacaagtggaagaggaggagtcaggggaggcccagctctcatttctcact
gacagccaaacagtgaccaccagcgtgctggagaaggagactgagcggttccgtgagctc
ttgctgtacggccggaagaaggatgctctggagtctgccatgaaaaatggcttatggggt
catgctctgctgcttgcaagtaagatggacagccggacacatgcccgtgtcatgactagg
tttgccaacagtcttccaatcaatgaccccctgcagactgtctaccagctcatgtctgga
cggatgcctgctgcatccacgtgttgtggagatgagaagtggggagattggaggccacat
cttgcaatggttttgtccaacctgaacaacaacatggatgttgaatctaggaccatggct
acgatgggtgatactctagcatcaaaaggcctgttggatgctgcacacttctgctacctg
atggcccaggttggatttggggtttatacaaagaaaactacaaaacttgtcttgataggc
tcaaatcacagtttgccctttttaaagtttgccaccaatgaagccattcaaaggacggag
gcttatgagtatgctcagtcgcttggggcacatacctgttccttacccaacttccaggtg
tttaaattcatctacttgtgccgcctggctgaaatgggacttgccacacaggccttccac
tactgcgaagtaatagcccagagtgtcctgacacagcctggtgcatactctccggtactg
attagccagttgactcagatggcttcccagttacgcctcttcgatcctcaactgaaggag
aagccggaagaggagtcctttgtggagcctgcctggttggtgcagctgcagcacatagag
aggcagatccaggagggcactgtgctgtggagccaggatggaactgaaccccaacagtgt
cgcattacatcaggctctgaggtggagcagtcagatggccctggactcaaccagcaggca
gggccaagggccgacaaccctctactgatgccaagcactgagcctttgatgcatggcgtg
caactgctgcccacagttcctcacacattgcccgatggccagcctgctcacctctccagg
gtgccgatgttcccagtgccaatgtctcgtgggcccctggagctgagtcctgcctatgga
cccccaggatctgcacttggcttcccagaatcctccagatctgatcctgcagtgctgcat
cctgggcaggccctgccacccactacactaagtctccaggaaagtgggcctccaccccag
gaggccaaaagtccagacccagaaatggtgccacggagctcacctgtcagacactcccct
ccagagctcagtcaagaggagtttggtgagagcttcgctgaccggggctcctcccgaaca
gcacaggacttgggaaccgccccggtatgggatcttggcagctccagtgggacacctgat
tctgaagggaagaaacctgcacaggctgtcaaaaaggagcccaaggaacccaagaagact
gagtcctggttctctcgttggctgcctgggaaaaaaaggacagaagcttatctaccagat
gacaagaacaaatcaattgtttgggatgaaaagaagaaccagtgggtgaatttgaatgaa
ccagaggaggagaagaaggctccacccccacctccaacatcgttccccagggttccccag
gtgactcccactgggcctgcaggaccacccacggcctccgtgaatgtgttttctagaaaa
gcaggtgggtccagagctcgctatgtggatgttctaaacccaagtggaacacagcggagt
gaaccaactcttgctcctgcagatttctttgctcctctcgccccactgccaatcccttct
aacttatttgtaccaaacccagatgcagaagagccacaacctgcagatgggactggctgt
aggggacaggcaacagctgggactcagtctaaggcagagcccaccctggaacccaaggtg
gtaagttctacagtatcagcccctggacctgagctcttaccctccaaaccagatgactcc
caaggaggagaggctcctggagaccattctcctggaggggcctctccgggtggatctgtg
cccttttacaaccctgcccagttggtgcaggcttctgtcacctcggggaattcaaggcca
gggaggattggccaaagaaaatatgcggcattgaactag
DBGET
integrated database retrieval system
