Mus pahari (shrew mouse): 110317561
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Entry
110317561 CDS
T05929
Symbol
Sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04210
Apoptosis
mpah04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
110317561 (Sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110317561 (Sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mpah04812
]
110317561 (Sptan1)
Cytoskeleton proteins [BR:
mpah04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
110317561 (Sptan1)
Intermediate filaments
Intermediate filament-binding proteins
110317561 (Sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_1
EF-hand_7
EF-hand_6
SH3_9
EF-hand_8
SH3_2
EF-hand_5
SH3_3
SH3_10
SCO1-SenC
Tetrabrachion
Motif
Other DBs
NCBI-GeneID:
110317561
NCBI-ProteinID:
XP_021047705
Ensembl:
MGP_PahariEiJ_G0024833
LinkDB
All DBs
Position
3:17238004..17306465
Genome browser
AA seq
2498 aa
AA seq
DB search
MDPSGVKVLETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWI
QEKLQVASDENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETI
RTRLMELHRQWELLLEKMREKGVKLLQAQKLVQYLRECEDVMDWINDKEAIVTSEELGQD
LEHVEVLQKKFEEFQTDLAAHEERVNEVNQFAAKLIQEQHPEEELIKTKQDEVNAAWQRL
KGLALQRQGKLFGAAEVQRFNRDVDETIGWIKEKEQLMASDDFGRDLASVQALLRKHEGL
ERDLAALEDKVKALCAEAARLQQSHPLSANQIQGKREELITNWEQIRTLAAERHARLDDS
YRLQRFLADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFKSA
DESGQALLAASHYASDEVREKLSILSEERTALLELWELRRQQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYA
MEDVATRRDALLSRRNALHERAMHRRAQLADSFHLQQFFRDSDELKSWVNEKMKTATDEA
YKDPSNLQGKVQKHQAFEAELSANQSRIDALEKAGQKLIDVNHYAKEEVAARMNEVISLW
KKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTNVQNLQKKH
ALLEADVAAHQDRIDGITIQARQFQDAGHFDAENIKKKQEALVARYEALKEPMVARKQKL
ADSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEIAGHEPRI
KAVTQKGNAMVEEGHFAAEDVKAKLSELNQKWEALKAKASQRRQDLEDSLQAQQYFADAN
EAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALMSDLSAYGSSIQALREQAQSCRQQV
APMDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPAQSASRENLLEEQGSIALRQGQIDNQTRITKEAGSVSLRMKQVEELYQSLLELG
EKRKGMLEKSCKKFMLFREANELQQWINEKEAALTSEEVGADLEQVEVLQKKFDDFQKDL
KANESRLKDINKVAEDLESEGLMAEEVQAVQQQEVYGAMPRDEADSKTASPWKSARLMVH
TVATFNSIKELNERWQSLQQLAEERSQLLGSAHEVQRFHRDADETKEWIEEKNQALNTDN
YGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAQRLIQSHPESAEDLKEKCTELNQA
WTSLGKRADQRKAKLGDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLER
HQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKEKLDILDQERTDLEKAWVQRRMM
LDHCLELQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEK
IAALQAFADQLIAVDHYAKGDIANRRNEVLDRWRRLKAQMIEKRSKLGESQTLQQFSRDV
DEIEAWISEKLQTASDESYKDPTNIQLSKLLSKHQKHQAFEAELHANADRIRGVIDMGNS
LIERGACAGSEDAVKARLAALADQWQFLVQKSAEKSQKLKEANKQQNFNTGIKDFDFWLS
EVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQV
KEKRDTINGRFQKIKSMATSRRAKLSESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRD
LTGVQNLKKKHKRLEAELAAHEPAIQGVLDTGKKLADDNTIGQEEIQQRLAQFVEHWKEL
KQLAAARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAF
ETDFTVHKDRVNDVCTNGQDLIKKNNHHEESISSKMKALSGKVSDLEKAAAQRKAKLDEN
SAFLQFNWKADVVESWIGEKENSLKADDYGRDLSSVQTLLTKQETFDAGLQAFQQEGIAN
ITALKDQLLAAKHIQSKAIEARHASLMKRWTQLLANSATRKKKLLEAQSHFRKVEDLFLT
FAKKASAFNSWFENAEEDLTDPVRCNSLEEIKALREAHDAFRSSLSSAQADFNQLAELDR
QIKSFRVASNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQHAN
AFHQWIQETRTYLLDGIAYRRVIRVCQYEVGDDLSGRSCMVEESGTLESQLEATKRKHQE
IRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQA
RNTTGVTEEALKEFSMMFKHFDKDKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFEAI
LDTVDPNRDGHVSLQEYMAFMISRETENVKSSEEIESAFRALSSEGKPYVTKEELYQNLT
REQADYCVSHMKPYVDGKGRELPTAFDYVEFTRSLFVN
NT seq
7497 nt
NT seq
+upstream
nt +downstream
nt
atggatccaagtggggtcaaagtgctggaaacagccgaggacatccaggagagacggcag
caggtcctggatcggtaccaccgcttcaaggagctctctaccttgcggcggcagaagctg
gaggattcctatcggttccagttttttcaaagagatgctgaggagttggagaagtggatt
caggagaagcttcaagttgcatctgatgagaactacaaagacccaaccaacctgcaggga
aagctgcagaagcaccaagcctttgaagctgaagtacaggctaactcaggagccattgtg
aagctggatgagacaggaaacttgatgatttctgaagggcactttgcatctgaaaccatc
cggacacgtttaatggagctgcatcgccagtgggaactgcttttggagaagatgcgagag
aaaggagtcaaactgctgcaggcacagaagctggtgcagtatttgcgggagtgtgaggat
gtaatggactggatcaatgacaaggaagcaattgtgacttctgaggagctgggccaggac
ctggagcatgtagaggtactgcagaagaagtttgaagagtttcagactgatctggctgct
catgaagaaagagttaatgaagtaaatcagtttgctgccaaactcatccaggagcagcac
cccgaggaggagctgatcaagaccaagcaggatgaggtgaatgcagcttggcagcgactg
aaaggcctggcccttcaaaggcaggggaagctgttcggtgctgctgaggtccagcgcttt
aacagggatgtagatgagaccattggttggattaaggagaaagagcagttaatggcctct
gatgactttggcagagacttagcaagtgttcaagctctgcttcgaaagcacgagggtctg
gagagagatcttgctgctctagaggacaaggtgaaagccctgtgtgccgaggctgcccgc
ctacaacagtcacaccctctgagtgccaaccagatccaggggaagcgagaggagctgatt
accaactgggaacagatccgaactctggcagcagagagacatgcacggcttgatgattcg
tacaggcttcagcgctttcttgctgacttccgtgacctcacaagctgggtgactgaaatg
aaagccctcatcaatgcagatgaactggccaatgatgtggctggtgctgaagccctgctg
gacaggcatcaagagcacaagggtgaaattgatgctcatgaagatagctttaagtctgca
gatgagtctgggcaagctctgctcgcggctagtcactatgcctcagatgaagtgagggag
aagctgagcatcctctcggaggagagaactgccctgctggagctgtgggagcttcggagg
cagcagtatgagcagtgcatggacttgcagctcttctaccgtgacactgagcaggtggac
aactggatgagcaagcaggaggcattcctgctaaatgaagacttgggagactccttagac
agcgtggaagctcttttgaagaagcatgaggactttgagaaatctctcagtgcccaagaa
gaaaaaatcacagcccttgatgaatttgcaaccaaactcatccaaaataaccactacgca
atggaagatgtagcgactcgacgagatgctctcctgagccgccgcaatgcccttcatgag
cgagccatgcatcgccgggcacagctggctgattccttccatctgcagcagttcttccgt
gattctgatgagctcaaaagttgggtcaatgagaagatgaaaacagccaccgatgaagct
tataaagatccatccaacctgcaagggaaagtccagaagcatcaggcttttgaggctgag
ctttcagcaaaccagagccggattgatgccctagagaaagctgggcaaaagctaatagat
gtcaaccactatgccaaggaagaagtagcagctcgtatgaatgaggtcatcagtttgtgg
aagaaacttctagaggccacagaactgaaaggaataaagctccgagaagccaaccagcag
caacaatttaatcgaaatgttgaagacattgaattatggctgtatgaagttgaaggtcac
ttggcttcagacgattatggtaaagacctcactaatgtccagaacctccagaagaagcat
gctctgctagaggcagatgtcgctgctcaccaggatcgaattgatggcatcacaattcag
gcccgccagttccaagatgctggccattttgatgctgaaaacattaagaagaagcaagag
gccctcgtggctcgctatgaggctcttaaggaacccatggtggcccggaagcagaagctg
gcagattctcttcgtctgcagcagctcttccgggatgtggaggatgaggaaacctggatt
cgagaaaaggagcctattgctgcatccactaacagaggcaaagatcttattggagtccag
aatctgctaaagaaacaccaagctttgcaagcagaaattgctgggcatgaacctcgcatc
aaagcagtgacacaaaagggaaatgccatggtggaggaaggtcattttgctgcagaggat
gtgaaggccaaactgagtgagctcaaccagaagtgggaggctctgaaagccaaagcctcc
cagcggaggcaggatctagaggactcgctacaggcccagcagtactttgccgatgccaat
gaggccgagtcatggatgcgggagaaggagcccattgtgggcagtactgactatgggaag
gatgaagactctgctgaggctctactcaagaagcatgaagctctgatgtcggatctcagc
gcctacggcagcagcatccaggctctgcgagagcaggcccagtcatgccggcaacaagtg
gctcccatggatgatgagactgggaaggagctggtcttggctctctatgactatcaagag
aagagtcctcgtgaggttaccatgaagaaaggggatatcctcaccttgctcaacagcaca
aacaaggattggtggaaagtggaagtgaatgaccgtcagggcttcgtgccagctgcatat
gtgaagaagctggaccccgcccagtcagcctcgagggagaacctcctggaagagcagggc
agcattgctctgcggcaggggcagattgacaaccagacacgcataactaaggaggccggc
agtgtatctctgcgtatgaaacaggtggaagaactatatcagtctctgctggaactgggt
gagaagagaaaaggcatgttggagaagagttgcaagaagttcatgttgttccgggaagcg
aacgagttacagcagtggatcaatgagaaggaggctgctctaacgagtgaggaggttggc
gctgacttggagcaagttgaggtgctgcaaaagaagtttgatgacttccagaaggatctg
aaagccaatgagtctcggctgaaggacattaacaaagtagctgaagacctggagtctgaa
ggtctgatggcagaggaagtgcaggctgtgcagcagcaggaggtgtatggtgcaatgccc
agggatgaagcagattccaagacagcctctccatggaagtctgctcgactgatggtccac
acagtggctaccttcaactccatcaaggagctgaatgagcgttggcagtccctgcaacag
ctggctgaggaacgtagccagctcttgggcagtgcacacgaagtacagaggttccacaga
gatgctgatgaaaccaaagaatggattgaagagaagaatcaggctctgaacacagacaac
tatggccatgatttagctagtgtccaggccctgcagcgcaaacatgaaggctttgagagg
gaccttgcagctcttggtgacaaggtgaattcccttggggaaacagcccaaaggctgatc
cagtctcatcctgaatctgcggaggacttaaaggaaaagtgcacagagttaaaccaggcc
tggaccagcctagggaagcgtgcagaccagcgcaaggccaaattgggtgactcccatgat
cttcagcgcttccttagtgatttccgggacctcatgtcttggatcaatggaatacgaggg
ttggtatcttcagatgaactagccaaggacgtcactggagctgaggctttgttggagcga
caccaggaacaccggacagaaattgatgccagggctggcactttccaggcatttgagcag
tttgggcagcagctgttggctcacggacactatgccagcccagagatcaaagagaaacta
gatattcttgaccaggagcgcacagacctggagaaagcctgggtccagcgtaggatgatg
ctggaccactgcctggagttgcagctgttccatcgggactgtgagcaagcagaaaactgg
atggctgcccgggaggccttcctaaacacagaagacaaaggagactctctggacagtgtg
gaggcgctgatcaaaaaacatgaagactttgacaaagctatcaatgtccaggaggaaaag
atagctgccctgcaggcctttgccgaccagctcattgccgttgaccactatgccaaggga
gacattgcaaaccgacgcaatgaggtccttgaccggtggcgccgcctaaaagcccagatg
attgagaaaaggtcaaaactcggagaatctcaaacacttcagcagttcagccgggatgtg
gatgagattgaagcctggatcagtgagaagttacagacagccagtgatgagtcatacaag
gaccccaccaacatccagctttccaagctgttgagcaagcaccagaagcaccaagccttt
gaggcagaactgcacgccaatgctgaccgaatccgtggagttattgacatgggcaactcc
ctcattgagcgtggggcctgtgctggcagtgaggatgctgtcaaggcccgcctggctgcc
cttgcagaccagtggcagttcctggtgcagaaatcagctgagaagagccagaagctaaaa
gaggcaaataagcagcagaacttcaacactggaatcaaagactttgacttctggctctct
gaggtggaggctctcctggcatcggaagattatggcaaagacctggcttctgtgaacaac
ttgctgaaaaagcatcagttgctagaggcagacatctcagcccacgaggatcgtctgaag
gacctgaacagccaggctgacagcctgatgactagcagtgccttcgacacctcccaagta
aaagagaagcgggacaccatcaatggacgcttccagaagatcaagagcatggccacctcc
cgaagagcgaaactgagcgagtcccaccgcctgcaccagttcttccgggacatggacgac
gaagagtcctggatcaaggagaagaagctgttagtgagctctgaggactatggcagagac
ctcactggtgttcagaatctgaagaagaaacacaagcggctagaagctgaactagctgca
catgaaccggccattcagggtgtcctggacactgggaagaagctggctgatgacaacacc
atcgggcaggaggagatccagcagcggcttgcacagtttgtggagcactggaaggagcta
aagcagctggcagctgcacggggccagcggctagaggagtccttggagtatcagcagttt
gtagccaatgtggaagaggaggaagcttggatcaatgagaagatgactctggtggccagt
gaagactatggagacactcttgctgccatccagggcttactgaagaaacacgaagctttt
gagacagacttcactgtccacaaggatcgggtgaatgatgtctgtactaacggacaagac
ctcattaaaaagaacaatcaccatgaggagagcatctcttcaaagatgaaggctctgagt
gggaaggtgtctgatctggagaaagcagcagcacagaggaaagcaaagctggatgagaac
tcagccttccttcagttcaactggaaggctgacgtggtagagtcctggattggtgaaaag
gagaacagcttgaaagcagatgactatggccgagatctgtcttctgtccaaactctgctc
acaaagcaggagacatttgatgctggcctgcaggccttccagcaggagggtattgccaat
atcactgccctcaaagaccagctgctagctgccaagcacattcagtctaaagccatcgag
gcccgacatgcctccctcatgaagagatggacccagctgttggccaactcagctacccgg
aagaagaagttgctggaggcccagagtcatttccgtaaggtagaagacctcttcctgacc
tttgccaaaaaggcatcggctttcaacagctggtttgagaatgcagaagaagacctgaca
gacccagtgcgctgcaactctctggaagaaatcaaagcccttcgagaggctcatgatgcc
ttccgctcatccctcagctctgcacaggctgacttcaaccagctagctgagctggaccgc
cagatcaagagtttccgggtggcctccaatccctacacctggttcaccatggaggccctg
gaagagacctggagaaacctccagaagatcattaaggaacgagaactggagctgcagaag
gaacagcggcggcaggaggagaatgacaagctgcgccaagaatttgcccagcatgccaac
gccttccaccagtggatccaggaaacaagaacttatctcctcgacggcatagcatatcgt
cgggtcattcgtgtctgtcagtatgaagttggggatgatctgtctggaaggtcctgcatg
gtcgaagagtcaggaactctggaatctcagcttgaagctaccaaacgcaagcaccaggag
attcgagccatgagaagccagctgaagaagatcgaggacctgggggctgccatggaggaa
gcccttatcctggacaacaagtacacggagcacagcaccgtgggcctagcccagcagtgg
gaccagttagaccagctgggcatgcgcatgcagcacaacctggagcagcagatccaggcc
aggaacacaacaggagtgactgaggaggccctcaaggaattcagcatgatgttcaaacac
tttgacaaggacaagtctggccggctgaaccaccaggagttcaaatcctgtcttcgttcc
ctgggctacgatctcccaatggttgaggaaggagagcctgatcctgagtttgaggcaatc
ctggacactgttgatcccaacagggatggccatgtctccctgcaagaatacatggctttc
atgatcagccgtgaaacggagaacgtcaagtccagtgaagagatcgagagcgctttccgg
gccctcagctctgagggcaagccttatgtgaccaaggaggagctctaccagaacctgacc
cgggaacaagctgactattgtgtttcccacatgaagccctatgtggatggcaagggccgc
gaacttccaactgccttcgactacgtcgagttcacccgctcactctttgtgaattga
DBGET
integrated database retrieval system
