Mus pahari (shrew mouse): 110317565
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Entry
110317565 CDS
T05929
Symbol
Rapgef1
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04015
Rap1 signaling pathway
mpah04510
Focal adhesion
mpah04722
Neurotrophin signaling pathway
mpah04910
Insulin signaling pathway
mpah05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
110317565 (Rapgef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110317565 (Rapgef1)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
110317565 (Rapgef1)
09156 Nervous system
04722 Neurotrophin signaling pathway
110317565 (Rapgef1)
09160 Human Diseases
09162 Cancer: specific types
05211 Renal cell carcinoma
110317565 (Rapgef1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
110317565
NCBI-ProteinID:
XP_021047710
Ensembl:
MGP_PahariEiJ_G0024824
LinkDB
All DBs
Position
3:16889662..17006252
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AA seq
1223 aa
AA seq
DB search
MSSGLGLRRSPEMSGKIEKADSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKPAEVSKIP
EKPVSKEARDRFLPEGYPIPLDLEQQAVEFMSTSAVASRSQRQKNLCWLEEKEKEVVSAL
RYFKTIVDKMAIDKKVLEMLPGSASKVLEAILPLVQTDPRIQHSSALSSCYSRVYQSLAN
LIRWSDQVMLEGVNSEDKEMVTTVKGVIKAVLDGVKELVRLTIEKQGRPSPTSPVKPTSP
ASKPDGQPEFPLTDREMEILNKTSVSPSAELLPDSTSEEVAPPKPPLPGIRVVDNSPPAL
PPKKRQSAPSPTRVAVVAPMSRATSGSSLPVGINRQDFDVECYTQRRLSGGSRSCGGESP
RLSPCSSTGKLSRSDEQLSSLDRDSGQCSRNTSCETLDHYDPDYEFLQQDLSNADQTPPQ
AACSLSPLPESLGESGPPFLGHPFQLPLGSCPQQEGQQTDTPPALPEKKRRSAVSQTTDS
SGCRVSYERHPSQYDNISEGDLQNPVSVQPVPYPPFAAVLPFQQGASSAPAEFVGDFSVP
ELAGDTEKPPPLPEKKNKHMLAYMQLLEDYSEPQPSMFYQTPQSEHIYQQKNKMLMEVYG
FSDSFCGSDSTQELAPPPALPPKQRQLQASYAASSFSVSYCVQQTKVAFTPEDGSATQGL
SVSVSNSFLNRHGSLPVPSYKSVFRSYSQDFMPHHQASVQPFLPPTSSSSPHFPPVHASQ
SSDLAVPTVSSPPPSTVDGPLSSSQDSSFHGNPVCLPSETSFTDSEPPSGKDGHPRDPSV
SSASGKDSRENGERSPKSLDGLESAQSEEEVDELSLIDHNEIMARLTLKQEGDDGPDVRG
GSGDILLVHATETDRKDLVLYCEAFLTTYRTFISPEELIKKLQYRYEKFSPFADTFKKRV
SKNTFFVLVRVVDELCLVELTEEILKLLMELVFRLVCSGELSLARVLRKNILDKVDQKKL
LRCAHSDQPLAARGVAARPGTLHDFHSHEIAEQLTLLDAELFYKIEIPEVLLWAKEQNEE
KSPNLTQFTEHFNNMSYWVRSIIMLQEKAQDRERLLLKFIKIMKHLRKLNNFNSYLAILS
AVDSAPIRRLEWQRQTSEGLAEYCTLIDSSSSFRAYRAALSEVEPPCIPYLGLILQDLTF
VHLGNPDYIDGKVNFSKRWQQFNILDSMRCFQQAHYEIRRNDDIINFFNDFSDHLAEEAL
WELSLKIKPRNITRRKTDREEKT
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcggcctcggcctccggcgcagcccggaaatgtccggcaagatcgagaaagca
gactctcagcgttctcatctctcctccttcaccatgaagctgatggacaaattccactct
cccaaaatcaagagaacaccatccaagaagggaaagccagccgaggtgtcgaagattcct
gagaagcctgtgagcaaagaggcaagagacagatttctaccagagggctaccctatcccc
ttggatctggagcagcaggcagtagaatttatgtccaccagtgctgtggcttccaggtct
cagaggcagaagaacctgtgctggctggaggagaaagagaaggaggttgtcagtgccttg
cgctactttaagaccattgtggacaaaatggccattgataagaaggttctggagatgctc
ccagggtcggccagtaaggtgctggaggccatcttacccctggtgcagactgaccctcgg
atccagcacagctcagccctctcctcctgttatagccgagtataccagagcctcgccaac
cttatccgatggtctgaccaggtgatgctagagggcgtgaactcagaagataaggagatg
gtgacaactgtgaagggcgttatcaaagctgtgctggacggagtgaaggagctagtaagg
ctaaccattgagaagcaggggcggccatcgccaacaagcccagtgaagcccacttccccg
gccagcaagcctgatggccagcctgagttccctctgacagaccgagaaatggagattctg
aacaagacaagtgtgtcaccatctgctgaactgctcccagactccaccagtgaagaggtc
gcaccccccaagccccctttacctggcatccgggtggttgataacagtccaccagcatta
ccacccaagaaaagacagtctgctccatcccccacccgagtggctgtggtagcccccatg
agtcgggctaccagtggctccagtttgcctgttggaatcaataggcaggactttgatgtt
gaatgttacacccagaggcgcctgtcaggaggcagccgctcctgcggcggtgagtctcct
cgcctgtccccctgcagcagcacaggcaagctcagccgctcagatgagcagctgtcctcc
ctcgacagggatagtgggcagtgctcacggaacacaagctgtgaaacactagatcactac
gaccccgactatgaattcctccagcaagacctctccaatgcagaccagacccctccacag
gcagcctgtagcctcagccctctgccggagtccctgggggaatctgggcctccatttctt
ggccaccctttccagctgcctttgggcagctgtccccagcaggagggacagcagacagac
actccacctgcccttcctgagaagaagcgtaggagcgcagtctcccagaccacagacagc
tctggctgcagggtgtcctatgagcgacacccctcacagtacgacaacatctcagagggt
gatctgcagaacccagtctcagtccagcctgtgccctacccaccctttgctgctgtcctg
ccctttcagcagggagcctcctctgcccctgctgagtttgtgggtgatttcagtgttcct
gagttggcgggtgacacagagaagccacctcctctaccagagaagaagaacaagcacatg
ctggcctacatgcaactgctggaggactactcagagccacagccctccatgttctaccag
acaccacagagtgagcacatctaccagcagaagaacaagatgctcatggaggtgtacggc
ttcagcgactccttctgcggtagtgactccacgcaagagctggccccgccacccgctttg
ccccccaagcaacggcagctgcaggcctcctatgctgcttcttccttctctgtctcctac
tgtgtccagcaaactaaagtggccttcacccccgaggacggcagtgccactcagggcctc
agtgtgtccgtgtctaactcctttctcaaccggcacggcagcttgcctgtgccctcgtac
aaatctgtgtttaggtcttactcccaggacttcatgcctcaccaccaagcctccgtccaa
ccttttcttccgcctacctcctcttcctctccacatttcccacctgtccacgcgtcccag
agctcggacttagcggtgcccaccgtaagcagtccgcctcccagcaccgtggacgggcct
ctctcgtcttctcaggacagcagctttcatgggaaccctgtctgccttccttccgaaacc
tctttcactgactcggaaccgccatctgggaaggacggacatcctagagatccttcggtc
agcagtgcatctgggaaggatagcagagaaaatggggagaggtccccgaagtcactggat
ggtctggagtcagcgcagtcagaagaggaagtggatgaactgtccctcattgaccacaat
gaaattatggccaggctgacactcaagcaagagggtgatgatgggccagatgttcgtgga
ggttcaggagacatcttactggtccatgctactgagacagacagaaaagacctggtgctg
tactgtgaagctttcctgacgacctacaggaccttcatcagcccggaggagctcatcaag
aagctgcagtaccggtacgagaagttctctccctttgctgacacgttcaagaagcgagtg
agcaagaacacattctttgtgctggtgcgagtggtggatgagctctgcctggtggagctg
acagaggagatcctgaagctgctgatggagctggtcttccgcctagtgtgcagcggagag
ctcagcctggccagagtactccggaagaacattctggacaaggtggaccagaagaagctc
ctcaggtgtgcccattccgaccagcctctggcagccaggggtgttgcagccaggccagga
accttgcatgatttccacagccacgagatagccgagcagctgacactgctggacgctgag
cttttctacaagatagagattcctgaagttttgctttgggccaaagagcagaatgaggag
aagagccccaatctgacccagttcacagagcacttcaacaacatgtcctactgggtgcgg
tccatcatcatgctgcaggagaaggcccaggaccgggagaggctgctcctcaagttcatc
aagatcatgaagcacctgcgcaagctcaacaacttcaactcctacctggccattctctca
gcagtagactcggcccccatccgcaggctggagtggcagcggcagacctcagagggcctg
gctgagtactgcacgttgattgacagctcatcctccttccgagcctaccgggctgctctc
tcagaggtggagcccccatgtataccgtacctaggtctgatcctgcaagacctgaccttc
gttcacctgggaaacccagattatattgacgggaaagtaaacttctccaagcggtggcaa
cagttcaacatcttggacagcatgcggtgcttccagcaggcgcactatgaaatccggagg
aacgacgacatcataaatttcttcaatgacttcagcgaccacctggccgaggaagccctg
tgggagctctctctgaagatcaagcctaggaacataacaaggcgaaaaacagaccgcgaa
gagaagacctag
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integrated database retrieval system
