Mus pahari (shrew mouse): 110317595
Help
Entry
110317595 CDS
T05929
Symbol
Abca2
Name
(RefSeq) ATP-binding cassette sub-family A member 2 isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah02010
ABC transporters
mpah04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110317595 (Abca2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
110317595 (Abca2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mpah02000
]
110317595 (Abca2)
Transporters [BR:
mpah02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
110317595 (Abca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
Motif
Other DBs
NCBI-GeneID:
110317595
NCBI-ProteinID:
XP_021047777
Ensembl:
MGP_PahariEiJ_G0024732
LinkDB
All DBs
Position
3:12601296..12621065
Genome browser
AA seq
2433 aa
AA seq
DB search
MGFLHQLQLLLWKNVTLKRRSPWVLAFEIFIPLVLFFILLGLRQKKPTISVKEAFYTAAP
LTSAGILPVMQSLCPDGQRDEFGFLQYANSTVTQLLERLNRVVEEGNLFDPVRPSLGSEL
EALRQRLEALSSGPGTWESHSARPAVSSFSLDSVARDQRELWRFLMQNLSLPNSTAQALL
AARVDPSEVYRLLFGPLPDLDGKLGFLRKQEPWSRLGSNPLFQMEELLLAPALLEQLTCA
PGSGELGRILTMPEGHQVDLQGYRDAVCSGQATARAQRFSDLATELRNQLDTAKIAQQLG
FDVPNGSDPQPQAPSPQSLQALLGDLLDAQKVLQDVDVLSALALLLPQGACAGRASAPQA
GSPSGLANSTGIGANAGSNTTAEEGTQSPVTPASPDTLQGQCSAFVQLWAGLQPILCGNN
RTIEPEALRRGNMSSLGFTSKEQRNLGLLVHLMTSNPKILYAPAGSEADRVILKANETFA
FVGNVTHYAQVWLNISTEIRSFLEQGRLQQHLQWLQQYVADLQLHPEAMNLSLEELPPAL
RQDFSLPNGTALLQQLDTIDNAACGWIQFMSKVSVDIFKGFPDEESIVNYTLNQAYQDNV
TVFASVIFQTRKDGSLPPHVHYKIRQNSSFTEKTNEIRRAYWRPGPNTGGRFYFLYGFVW
IQDMMERAIINTFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVYSVAM
TIQHIVAEKEHRLKEVMKTMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGQVLMHSH
VLIIWLFLAVYAVATIMFCFLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIREEVARDK
ITAFEKCIASLMSTTAFGLGSKYFALYEVAGVGIQWHTFSQSPVEGDDFNLLLAVTMLMV
DTVVYGVLTWYIEAVHPGMYGLPRPWYFPLQKSYWLGSGRTEAWEWSWPWAHTPRLSVME
EDQACAMESRHFEETRGMEEEPTHLPLVVCVDKLTKVYKNDKKLALNKLSLNLYENQVVS
FLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTV
EEHLWFYSRLKSMAQEEIRKETDKMIEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGS
RAIILDEPTAGVDPYARRAIWDLILKYKPGRTILLSTHHMDEADLLGDRIAIISHGKLKC
CGSPLFLKGAYGDGYRLTLVKRPAEPGTSQEPGLASSPSGRSQLSSCSEPQVSQFIRKHV
ASSLLVSDTSTELSYILPSEAVKKGAFERLFQQLEHSLDALHLSSFGLMDTTLEEVFLKV
SEEDQSLENSEADGKESRKDVLPGAEGLTAVAGQAGNLARCSELAQSQASLQSSSSVGSA
RGEEGTGYSDGYGDYRPLFDNLQDPDNVSLQEAEMEALAQVGQGSRKLEGWWLKMRQFHG
LLVKRFHCARRNSKALCSQILLPAFFVCVAMTVALSVPEIGDLPPLVLSPSQYHNYTQPR
GNFIPYANEERQEYRLRLSPDASPQQLVSTFRLPSGVGATCVLKSPANGSLGPMLNLSSG
ESRLLAARFFDSMCLESFTQGLPLSNFVPPPPSPAPSDSPVSPDEDSLQAWNMSLPPTAG
PETWTSAPSLPHLVREPVRCTCSAQGTGFSCPSSVGGHPPQMRVVTGDILTDITGHNVSE
YLLFTSDRFRLHRYGAITFGNVQKSIPASFGARVPPMVRKIAVRRVAQVLYNNKGYHSMP
TYLNSLNNAILRANLPKSKGNPAAYGITVTNHPMNKTSASLSLDYLLQGTDVVIAIFIIV
AMSFVPASFVVFLVAEKSTKAKHLQFVSGCNPVIYWLANYVWDMLNYLVPATCCVIILFV
FDLPAYTSPTNFPAVLSLFLLYGWSITPIMYPASFWFEVPSSAYVFLIVINLFIGITATV
ATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNLGHGLMEMAYNEYINEYYAKIGQFDKMK
SPFEWDIVTRGLVAMTVEGFVGFFLTIMCQYNFLRQPQRLPVSTKPVEDDVDVASERQRV
LRGDADNDMVKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKML
TGDESTTGGEAFVNGHSVLKDLLQVQQSLGYCPQFDALFDELTAREHLQLYTRLRGIPWK
DEAQVVKWALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKA
RRFLWNLILDLIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGY
MITVRTKSSQNVKDVVRFFNRNFPEAMLKERHHTKVQYQLKSEHISLAQVFSKMEQVVGV
LGIEDYSVSQTTLDNVFVNFAKKQSDNVEQQEAEPSTLPSPLGLLSLLRPRPTPTELRAL
VADEPEDLDTEDEGLISFEEERAQLSFNTDTLC
NT seq
7302 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcctgcaccagctgcagctgctgctctggaagaacgtgacgctgaagcgccgg
agcccgtgggtcctggctttcgagatcttcatcccacttgtcctcttcttcatcctgttg
ggactgcggcagaagaagcccactatctctgtgaaggaagctttctacaccgcagcaccg
ctgacatcagccggcatcctgcctgtcatgcagtcgctttgccctgatggtcagcgtgat
gagtttggcttcctgcaatatgccaactccacggtcacccagcttctagaacgcctcaac
cgtgtggtggaggaaggcaacttgttcgacccagtgcgacccagcctgggctcagagctc
gaggctctgcgccaacgtctggaggccctcagctcaggccctggcacctgggagagccac
tcagccaggcctgcagtgtcgtccttctctctggactcggtggccagggaccagagagag
ctttggcgtttcctgatgcagaacctgtcactgcccaacagcacggcccaggccctcctg
gctgcccgtgtggacccttctgaggtctatcgcttgctttttggtcctttgcctgacctg
gatggaaagttgggtttcctcaggaagcaggagccctggagccgcctgggtagcaatcct
ctgttccaaatggaggagctgctgctggctcctgcccttttggaacagctcacatgtgct
ccaggctctggggagctgggccggattcttaccatgcctgagggtcatcaggtagacctt
cagggctaccgggatgccgtgtgcagtggacaggctacagctcgtgcccagcgcttcagt
gatctggccactgagctcaggaaccagctggacacagccaagattgcccagcagctgggc
ttcgatgtccccaacggctcagatccccagccacaggcaccgtccccacagagcctgcag
gcgctcttaggggacctgctggacgcccagaaagttctgcaggatgtggatgtcctatca
gcccttgccctgctgctgcctcaaggtgcctgtgccggccgagcctctgcacctcaagcc
ggcagcccgagtggcctggccaacagcaccgggataggtgcaaatgcaggttccaacacc
accgctgaggagggcacccagtcacctgtcaccccagcctctcctgacaccttgcaaggg
cagtgctcagcctttgtgcagctctgggctggcttgcaacccatcttgtgtggcaacaac
cgcaccatagagcctgaagcgcttcgaaggggcaacatgagctccctgggctttacaagc
aaggaacaacggaacttgggccttcttgtgcacctcatgaccagcaaccccaaaatcctg
tatgcaccagcgggctctgaagctgaccgtgttatcctcaaggcaaatgagacctttgcc
tttgtgggcaacgtgacacactatgcccaggtctggctcaacatctccacagagatccga
agcttcctggagcagggcaggctgcagcagcatctgcagtggttgcagcagtatgtagcg
gatcttcagctgcaccctgaagcaatgaacctgtctctggaggagctgccacctgctctg
cgccaggacttctcactgcctaatggcacggccctcctgcaacagcttgacacaatagac
aacgcagcctgtggctggatccagttcatgtccaaggtgagtgtggacatcttcaagggg
tttcccgatgaggagagcatcgtaaactacactctcaatcaggcctaccaggataatgtc
acagtgtttgccagcgtgatcttccagacacggaaggatggttccctccctccacatgta
cattacaagattcgccagaattcaagcttcacggagaaaaccaatgagatccgccgcgct
tattggcgtccagggcccaacaccggtggtcgtttctacttcctctatggcttcgtctgg
atccaggacatgatggagcgcgccatcatcaacacatttgtggggcatgacgtggtcgaa
cctggcaactacgtgcagatgttcccatacccctgctacacccgtgacgacttcctgttt
gtcattgaacacatgatgccattgtgcatggtgatctcctgggtctactccgtggccatg
accatccagcacattgtggcagagaaagagcacaggctcaaggaggtgatgaagacgatg
ggcctgaacaacgccgtgcactgggtggcctggttcatcacgggcttcgtgcagttatct
atctccgtgacagctctgaccgccatcctcaagtatggccaggtgctcatgcacagccac
gtgctcattatctggctcttccttgccgtctacgctgtggccactatcatgttttgcttc
ctggtgtctgtgctgtactctaaggctaagttggcctcagcttgcggcggtatcatctac
ttcctgagctacgttccctacatgtatgtagcgatccgcgaggaggtagcccgtgataag
atcactgcctttgagaagtgcattgcgtccctgatgtccacaacagcctttggcctgggt
tccaagtactttgcactgtatgaagtggcaggagtgggcatccagtggcacacgttcagc
cagtccccagtggaaggggatgacttcaacctgctccttgctgtcaccatgcttatggtg
gacacagtggtttacggcgtgctcacttggtacattgaggctgtgcacccaggtatgtat
gggctgccccggccctggtacttcccgctacagaagtcgtattggctgggcagtgggcgg
acagaggcctgggagtggagctggccatgggcacacacgccgcgcctcagcgttatggag
gaggaccaggcctgtgccatggagagccggcactttgaggagacccgcggtatggaggag
gagcccacccacctgcccttggtcgtctgtgtggacaagctcaccaaggtctataagaat
gacaagaagctggccttaaacaaactgagcctcaatctgtatgagaatcaggtggtctcc
ttcctaggccacaatggggctggcaagaccacgaccatgtcgatcctgactggactgttc
ccacccacgtcgggctcagccactatctatgggcacgacatccgcaccgagatggatgag
atccgcaagaacctgggcatgtgcccgcaacacaacgtgctctttgaccggctcacggtg
gaggaacacctctggttctactcacgcctcaaaagcatggcacaggaggagatccgcaaa
gagacggacaagatgattgaggatctggagctctccaacaagcggcactcactggtacag
acattgtctggaggcatgaagcgcaagctttcagtagccattgcctttgtgggtggctct
agagccattatcttagacgagcccacggctggcgtggacccctatgctcgccgtgccatc
tgggacctcattctgaagtacaaaccgggccgcactatcctcctgtctacccatcacatg
gatgaggctgacctgcttggggatcgaattgccatcatctcccatgggaaactcaaatgc
tgtggctctcccctcttcctcaagggtgcctacggtgatgggtaccgcctcacattggtc
aagcggcctgcagaacctggcacctcccaagagccagggctggcttccagcccttcgggt
cgttctcagctgagcagctgctcagagccgcaagtgtcccagttcatccgcaagcatgtg
gcttcctccctgctggtctcagacacgagcactgagctctcctacatcctgcccagtgag
gccgtcaagaaaggggctttcgagcgcctctttcagcaactggaacacagcctggatgca
ctccatctgagcagttttgggctgatggacacaactctggaggaggtgttcctcaaggtg
tctgaagaagaccagtccctggagaacagcgaggctgatgggaaggagtcccggaaggat
gtgctgccaggggcagagggcctgacagccgtggcgggtcaagctggcaacctggctcgg
tgctcagagctggcacagtcacaggcatcactgcagtcctcatcctctgtgggctctgcc
cgtggggaggagggcaccggctactctgatggctacggtgactaccgtcccctctttgac
aacttgcaggacccagacaatgtcagcttacaagaggcagaaatggaggccctggctcag
gtgggccagggcagccgcaaactcgagggctggtggctgaagatgcggcagttccatggg
ctcctggtgaagcgcttccactgcgctcgtcggaactccaaagctctctgctctcagatc
ctgttgcctgccttctttgtctgtgtggccatgactgtggcattgtctgtccctgagatt
ggtgacctacctccactggtcctgtcaccctctcagtaccacaactacacccagccccgt
ggcaactttatcccctatgccaatgaggaacgccaggagtaccgattacggctgtcacct
gatgccagcccccagcagctggtgagcacattccggctgccctctggtgtgggtgccact
tgtgtgctcaagtctcctgccaacggctccctggggcccatgctgaacttaagcagtgga
gagtcgcgcctgctggctgcacggttcttcgacagtatgtgcctggagtccttcacacag
gggctgccactgtccaacttcgtgccacccccgccctcacccgccccttccgactcaccc
gtgtccccagatgaggattcactgcaagcctggaacatgtccctgccacctactgctggg
ccagagacgtggacgtcggcgccttctctgccacacctagtgcgtgagccggtccgctgt
acctgctctgcacagggcacggggttctcatgtcccagcagtgtgggtggacacccaccc
cagatgagagtggtcacaggtgacatcctgactgacatcactggccacaatgtttctgaa
tacctgctcttcacctctgaccgtttccgactacaccgatatggagccatcacctttggt
aatgttcagaagtctatcccagcatcctttggtgcccgggtccctcctatggtgcggaag
attgcagtgcggagggtggcacaggtgctctacaataacaagggctaccacagcatgccc
acctacctcaacagcctcaacaatgccattctgcgtgcaaacctacccaaaagcaagggc
aatccagcagcctatggcatcactgtcaccaaccaccccatgaacaagaccagtgccagc
ctctccctggattacctactgcagggcacagatgtggtcatcgccatcttcatcattgtg
gccatgtccttcgtgccagccagctttgtggtcttccttgtggcagagaaatccaccaag
gccaaacacttgcagttcgtcagcgggtgcaaccctgtcatctactggctggccaactac
gtgtgggacatgctcaattacctggtcccggccacctgctgcgtgatcatcctctttgtc
tttgacttacctgcctacacatcacccaccaacttcccagcggtgctctccttgttcctg
ctctacgggtggtccatcacacccatcatgtacccagcctccttctggtttgaggtccct
agctcagcctacgtgttcctcatcgtcatcaacctcttcattggcatcacggccacggtg
gccaccttccttctgcagctttttgagcatgacaaggatctgaaggttgtcaacagttac
ctgaaaagctgcttcctcatcttccccaactacaacctgggccacggactcatggagatg
gcctacaatgagtacatcaacgaatactacgccaagattggccagtttgacaagatgaag
tccccattcgagtgggacattgtcacacgtggactggtggccatgacagtcgagggcttc
gtgggattcttcctcaccatcatgtgccagtataacttcctgcggcagccacaacgcctg
cctgtgtcgactaaacctgtggaagatgatgtggatgtggctagtgagcgacagagggtg
ctccgtggcgatgctgacaatgacatggtcaagatcgagaacctgaccaaggtgtacaag
tctcggaagatcggccggatcctggcagttgaccgcctttgcctgggtgtgcgccctgga
gagtgctttgggctccttggtgtcaatggtgcagggaagaccagcaccttcaagatgctg
actggagatgagagcacaacagggggcgaggcctttgtcaatggacacagcgtgctcaag
gacctgctccaggtacagcagagccttggctactgccctcagttcgacgccctgtttgat
gagctcacggctcgtgaacacctgcaactgtacacgcggctgcgtggcatcccctggaag
gatgaggctcaggtggtgaagtgggccctggagaagctggaactgacaaagtacgcagac
aagccagctggcacctacagtggaggcaacaaacggaagctttccacagccattgccctc
attgggtaccctgccttcatctttctagacgagcccaccactggcatggaccctaaggcc
cggcgcttcctgtggaacctcattctggacctcatcaagacaggacgttcggtggtgctg
acgtcacacagcatggaggagtgtgaggctctgtgcacacggttggccatcatggtgaac
gggcggctgcgctgcctgggcagcatccagcacctcaagaacaggttcggggatggctac
atgatcaccgtaaggaccaaaagcagccagaacgtgaaggacgtggtgcggttcttcaac
aggaacttcccagaggccatgctcaaggaaaggcaccatacaaaggtgcagtatcagctc
aagtcagagcatatctcgctggctcaggtgttcagcaagatggagcaggttgtgggtgtg
ctgggcatcgaggactactcagtcagccagaccactctggataacgtgtttgtgaacttt
gcgaagaagcagagtgataatgtggagcagcaagaggctgagccctcgaccttgccgtcc
ccccttggactgctcagcctgctgaggccccgccccacacccacagagctccgggccttg
gtggctgatgagcctgaggacctggacacagaggatgagggcctcatcagctttgaggaa
gagcgggcccagctctccttcaacactgatacgctctgctga
DBGET
integrated database retrieval system
