Mus pahari (shrew mouse): 110317626
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Entry
110317626 CDS
T05929
Symbol
Soga1
Name
(RefSeq) protein SOGA1
KO
K27704
microtubule cross-linking factor
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mpah03036
]
110317626 (Soga1)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
110317626 (Soga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
Motif
Other DBs
NCBI-GeneID:
110317626
NCBI-ProteinID:
XP_021047846
Ensembl:
MGP_PahariEiJ_G0026012
LinkDB
All DBs
Position
3:complement(139388485..139459577)
Genome browser
AA seq
1655 aa
AA seq
DB search
MEAPAGESSARGYGPPPAPAPAAERKKSHRAPSPARPKDVAGWSLAKGRRGTGPGTATAC
GTASSARPDKKGRAVAPGTRGTGSRVAGARTGVRAKGRPRPVTGPRPPPPPPSLTDSSSE
VSDCASEEARLLGLELALSSDAESAAGGPAGTRTGQPPQPAPSGQQPPRPPASPDEPSVA
ASSVGSSRLPLSASLAFSDLTEEMLDCGPGGLVRELEELRSENDYLKDEIEELRAEMLEM
RDVYMEEDVYQLQELRQQLDQASKTCRILQYRLRKAERRSLRAAQTGQVDGELIRGLEQD
VKVSKDISMRLHKELEVVEKKRMRLEEENEGLRQRLIETELAKQVLQTELDRPREHSLKK
RGTRSLGKTDKKPSAQEDSADLKCQLHFAKEESALMCKKLTKLAKENDSMKEELLKYRSL
YGDLDAALSAEELADAPHSRETELKVHLKLVEEEANLLSRRIVELEVENRGLRAEMDDMK
DHGGGGGPEARLAFSSLGGECGESLAELRRHLQFVEEEAELLRRSSAELEDQNKLLLNEL
AKYRSEHELDVTLSEDSCSVLSEPSQEELAAAKLQIGELSGKVKKLQYENRVLLSNLQRC
DLASCQSTRPMLETDAEAGDSAQCVPAPLGETLEPHAARLCRAREAEALPGLREQAALVS
KAIDVLVADANGFSVGLRLCLDNECADLRLHEAPDNSEGPRDAKLIHAILVRLSVLQQEL
NAFTRKADVALGSSGKEQQEPFPALPALGSQGPAKEIMLSKDLGSDFQPPDFRDLLEWEP
RIREAFRAGDLESKPDPSRNFRPYRAEDNDSYASEIKELQLVLAEAHDSLRGLQEQLSQE
RQLRKEEADSFNQKMVQLKEDQQRALLRREFELQSLSLQRRLEQKFWSQEKNILVQESQQ
FKHNFLLLFMKLRWFLKRWRQGKVLPSEEDDFLEVNSMKELYLLMEEEEMNAQHSDNKAC
TGDSWTQNTPNEYIKTLADMKVTLKELCWLLRDERRGLTELQQQFAKAKATWETERAELK
GHASQMELKAGKGASERPGPDWKAALQREREEQQHLLAESYSTVMELTRQLQLSERHWSQ
EKLQLVERLQGEKQQVEQQVKELQNRLSQLQKAAEPWVLKHSDMEKQDNSWKEARSEKTH
DKEGVSEAELGGTGLKRTKSVSSMSEFESLLDCSPYLAGGDARNKKLPNGPAFAFVSTEP
VEPEKDAKEKAGISTRDCSHIGSLACQEPAGRQMQRSYTAPDKTGIRVYYSPPVARRLGV
PVVHDKEGKILIEPGFLFTTAKPKESAEADGLAESSYSRWLCNFSRQRLDGGSGASASGS
GPAFPAALHDFEMSGNMSDDMKEITNCVRQAMRSGSLERKVKSASSQTVGVATVGTQTIR
TVSVGLQTDPPRSSLHSKSWSPRSSSLVSVRSKQISSSLDKVHSRIERPCCSPKYGSPKL
QRRSVSKLDSTKDRSLWNLHQGKQNGSAWARSTTTRDSPVLRNINDGLSSLFSVVEHSGS
TESVWKLGMSEARTKPEPPKYGIVQEFFRNVCGRAPSPTTAAGEESSKKPEPLSPASYHQ
PEGVARILSKKAAKAGGSEEVRPTMLSQVGKDGILRDGDGSLILPSEDAVCDCSAQSLAS
CFIRPSRGAIRHSPSKCRLHPSESGWGGEERAAPQ
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgccagcgggagagtcatcggcgcggggctacggccccccgcctgcgcccgcg
cccgccgcggagaggaagaaaagccaccgcgcaccatcgccagctcggcccaaggacgtg
gccggctggtctctggccaaaggccgccgcggcacaggcccgggaaccgctacagcctgt
ggcaccgcgtcctcggcgaggcccgacaagaaggggcgcgcggtggctcctggcacccga
ggcacggggtctcgggtggccggggcgcgcacgggggtccgcgccaagggccgccctcgt
cccgttaccgggccccgcccgccgccgccgccgcccagcctcacggacagtagctccgag
gtgtcggactgcgcgtcggaggaggcgcgcctgttgggcctggagctagcgctgagcagc
gacgccgagtctgcggcgggcggcccggcggggacccgcaccgggcagccgccgcagcca
gcgccgtcggggcaacagcctccgcggccgcccgcctccccggatgagccgtcggtggct
gcatcgtcggtgggcagcagccgcttgccactcagcgcctcgctagccttctccgacctc
accgaggagatgctggactgtgggcccggaggcttggtgcgggagctggaagagctgcgt
tccgagaacgactatctcaaggatgagattgaggagctacgggctgagatgctggagatg
cgggatgtctacatggaggaagacgtgtatcagctgcaggagttacggcagcagctggac
caagccagcaagacctgtcgcatcctgcagtaccgactgcgtaaagctgagcgccgcagc
ctccgcgctgcccagacaggccaggttgatggggaactcatccgaggtctggaacaggac
gtcaaggtctctaaggacatctccatgcggcttcacaaggagctcgaggtggtggagaag
aagcggatgaggctggaagaggagaacgaggggcttcgacagaggctcattgagacggag
ctggccaagcaggtgctgcagacggagctggatcgtcccagagagcattccttgaagaaa
agaggaacccggtctctggggaagacagataagaagccttctgcacaggaggatagtgca
gacctgaagtgccagctgcattttgcaaaggaggagtcggccctcatgtgcaagaagctc
accaagttggctaaggagaacgacagcatgaaggaggagctgctcaagtaccgatcgctc
tatggggacctggatgcagccctgtccgcagaggagctggcagatgctccacactcccgt
gagactgagctgaaggtgcacctgaagctggtggaggaggaggccaacctgctgagccgt
cgcatcgtggagctggaggtggagaaccgtggcctgcgagccgagatggacgacatgaag
gaccacgggggtggcgggggccccgaggccaggctggccttctcgtctctgggtggtgag
tgtggggagagtctagccgagttgcggcgccatctgcagttcgtggaagaggaggctgaa
ctgctgcggcgctcctcagccgaactggaggaccagaacaagttgctgctgaacgagctg
gctaagtaccgctcggagcacgagctggacgtgactctgtcggaggacagctgctcagtg
ctcagcgagccctcgcaggaggagctggcagccgccaagttgcagatcggcgagctcagc
ggcaaggtcaagaagctgcagtatgagaaccgcgtgctcctctccaacctgcagcgctgt
gacctggcctcctgccagagcacacgccccatgctggagacggatgccgaggctggggac
tccgcgcagtgcgtgcctgcccctctgggtgagacgctggagccccacgccgcccggctg
tgcagggcccgtgaggccgaggcgctgcccggcctaagggagcaggccgcgttggtcagc
aaggccatcgacgtcctagtggctgatgccaatggcttctcagtcggcctccgcctgtgc
ctggacaatgagtgtgctgacttgcgactgcacgaggcgcctgacaacagcgagggcccc
agggatgccaagctcatccacgccatcctggtgcggctgagtgtgttgcaacaggagctg
aacgccttcacccgcaaagcagatgtggctttggggagctctggcaaggagcagcaggag
cccttccctgctctgcctgccttgggctcccaggggcctgctaaggagatcatgctgtcc
aaagaccttggctctgacttccagccacctgacttcagagacctgctggagtgggagccc
aggatccgagaggccttccgtgccggggacttggagtccaagcctgaccctagtcggaac
ttcaggccttaccgagctgaagataatgattcctatgcctctgagatcaaggagcttcag
ctggtcctggccgaggcccatgacagcctccggggcttgcaagagcagctgtcccaggag
cggcagctccggaaggaggaggctgacagcttcaaccagaaaatggtccagctgaaggaa
gaccagcagagggcgctgctgagacgggagtttgagctgcagagtctgagcctccagcgg
cgactggagcagaagttctggagccaagagaagaacatactggtgcaggagtcccagcag
ttcaagcacaacttcctgctgctcttcatgaagctccggtggttcctgaagcgctggcgg
cagggcaaggttctgcccagcgaggaggatgacttcctggaggtgaacagcatgaaggaa
ctgtatctgctgatggaggaagaggagatgaacgcccagcactcggataacaaggcctgc
acaggggacagctggacccagaacacgcctaatgagtacatcaagaccctggccgacatg
aaggtcaccctgaaggagctgtgctggctgctccgggatgagcgtcggggtctcactgaa
cttcagcagcagttcgcaaaggccaaggccacctgggagacagagcgagcagagctcaag
ggccacgcctcgcagatggagctgaaggccgggaagggtgccagcgagaggcccgggccc
gactggaaggctgcactgcagagagagcgcgaggagcagcaacacctcctggcagagtcc
tacagcaccgtcatggagctgacgaggcagctgcagctgagcgagcgccactggagccag
gagaagcttcagctggtggagcggctgcagggagagaagcagcaggtggagcagcaggtg
aaggagctgcagaaccgcctcagtcagctgcagaaggctgctgagccctgggtcctgaag
cactcggacatggagaagcaagacaacagctggaaagaggcacgaagtgagaagacccat
gacaaggagggtgtttctgaagccgagcttgggggaaccggcttaaagaggaccaaatca
gtctcctccatgtctgagtttgaaagtttgctcgactgctccccgtaccttgctggcggg
gatgcccggaacaagaagctgcccaacggccctgcttttgcctttgtgagtactgagccg
gtggagcctgagaaagacgccaaggagaaggcggggatttccacccgggactgtagccac
attggtagcctggcctgtcaggagcctgcagggagacagatgcagcgcagctacactgct
ccagataagacaggaatccgagtctactacagtccaccagtggcccggcgcctgggtgtc
cctgtggtccatgacaaggagggcaagatcctcatcgagccaggcttcctcttcaccacc
gccaagcccaaggagtcagccgaggccgacgggctggccgagagctcctacagccggtgg
ctgtgcaatttctcccggcagcggctggacggaggatccggggccagcgcctcgggttcc
ggacctgctttccccgctgccttgcatgactttgagatgtcgggcaacatgagtgacgac
atgaaggagatcaccaactgcgtgcgtcaggccatgcgctccggctccctggagaggaag
gtgaagagcgcatccagccagacggtgggcgtggccaccgtgggcacccagaccattcgg
acggtcagtgtgggtcttcagaccgacccaccccgcagcagcctccatagcaagagctgg
tcaccccgcagctcctcgcttgtgtctgtgcgcagcaagcagatctcttcctctctggac
aaggtccattctcgcattgagcggccatgctgctcgcccaagtatggctcacccaagctc
cagaggcgatcggtgtccaaattggacagcaccaaggaccgcagcctgtggaacctgcac
cagggcaagcagaatggctccgcctgggctcgctccaccaccacacgggatagtccagta
ctgaggaacatcaatgatgggttgtctagcctctttagcgtggtggagcactcagggagc
actgagtctgtgtggaaactgggcatgtctgaggcccgaaccaagcctgagcctcccaag
tatggcattgttcaggaattcttccggaacgtgtgtggccgggcaccaagccccactact
gcagcaggcgaggagagctccaagaaaccagagcccctttcgccagccagctaccatcaa
cccgagggggtagccaggatcctgagtaagaaggcggccaaggcaggtggtagtgaagag
gtcagacccaccatgctgtcccaggtggggaaggatggcatccttcgggatggagatgga
tccttgatccttccgagtgaggatgctgtgtgtgactgtagtgcccagtcacttgcctcc
tgtttcatccggccatcccgaggcgccatccgccactctccctccaagtgcaggctgcac
ccttcagagtcaggctggggcggggaggagagagcagctccccagtga
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integrated database retrieval system