KEGG   Mus pahari (shrew mouse): 110317752
Entry
110317752         CDS       T05929                                 
Symbol
Rae1
Name
(RefSeq) mRNA export factor
  KO
K14298  mRNA export factor
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03013  Nucleocytoplasmic transport
mpah05014  Amyotrophic lateral sclerosis
mpah05164  Influenza A
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110317752 (Rae1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    110317752 (Rae1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    110317752 (Rae1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpah03019]
    110317752 (Rae1)
   03036 Chromosome and associated proteins [BR:mpah03036]
    110317752 (Rae1)
Messenger RNA biogenesis [BR:mpah03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     110317752 (Rae1)
Chromosome and associated proteins [BR:mpah03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    110317752 (Rae1)
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_SPT8
Other DBs
NCBI-GeneID: 110317752
NCBI-ProteinID: XP_021048127
Ensembl: MGP_PahariEiJ_G0026185
LinkDB
Position
3:155293125..155309430
AA seq 368 aa
MSLFGSTSGFGTGGTSMFGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAG
SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPIAACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagtctgtttggatcaacctctggatttggaactggtgggaccagtatgtttgggagc
acaaccacggataaccacaacccaatgaaggatattgaagtaacatcttctcctgatgac
agcatcggttgtctgtctttcagcccaccaaccttaccaggcaacttccttattgcagga
tcatgggctaatgatgttcgctgctgggaagtgcaagacagcgggcaaaccattccaaag
gcccagcagatgcacacggggccagtgcttgacgtctgctggagtgatgatgggagcaaa
gtattcacagcatcgtgtgacaagacagccaagatgtgggacctgaacagcaaccaggcc
attcagatagcacagcatgacgctcctgttaagaccatacattggatcaaagccccaaac
tacagctgcgtgatgaccgggagctgggataagactctgaagttttgggatacacggtcc
tcaaatcctatgatggtcttgcaactccctgaacgctgttactgtgcagatgtgatatac
ccgatggctgtggtagccactgcagagaggggcctgattgtctatcagctagagaatcag
ccctctgagttcaggagaatagagtctcccctgaagcaccagcatcggtgtgtggctatt
tttaaagacaaacagaacaagccgactgggtttgctctgggcagcattgaggggagagtt
gccattcactacatcaaccctccaaatccggccaaagataacttcaccttcaaatgccat
cgatccaacggtaccaacacttcggctcctcaagacatctatgcagtgaatgggattgcc
ttccatcctgtccatgggacccttgccactgtgggctctgacggtaggttcagcttctgg
gacaaagatgccaggaccaagctaaagacctcagagcagctagatcagcccatagcagcc
tgctgcttcaatcacaacgggaacatatttgcctatgcttccagctacgactggtccaag
ggacatgagttttataatccccaaaagaaaaattacattttcttgcgtaatgcagctgaa
gagctaaagccaaggaataagaagtag

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