Mus pahari (shrew mouse): 110318080
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Entry
110318080 CDS
T05929
Symbol
Taf4
Name
(RefSeq) transcription initiation factor TFIID subunit 4
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03022
Basal transcription factors
mpah05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110318080 (Taf4)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
110318080 (Taf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpah03021
]
110318080 (Taf4)
03036 Chromosome and associated proteins [BR:
mpah03036
]
110318080 (Taf4)
Transcription machinery [BR:
mpah03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110318080 (Taf4)
Coactivators
SAGA/TFTC/STAGA complex
110318080 (Taf4)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
110318080 (Taf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
110318080
NCBI-ProteinID:
XP_021048480
Ensembl:
MGP_PahariEiJ_G0026213
LinkDB
All DBs
Position
3:complement(162192413..162254276)
Genome browser
AA seq
820 aa
AA seq
DB search
MAAGSDLLDEVFFNSEVDEKVVSDLVGSLESQLAASAAHHHHLAPRTPELRAAAAGALGN
HVVSGSPAGAAGAGPAASAEGAPAAAPEPPPAGRARPAGGGPRRPGSSSPRRLLVPAGGP
AMPGALPGPAPGTPVGLAKGAAAATPSLPRTPAATTGAIRATLTPTVLAPRLPQPPQNPT
NIQNFQLPPGMVLVRSENGQLLMIPQQALAQMQAHAQAQPQSTMAPRPATPTGAPPVQIS
TVQAPGTPIIARQVTPTTIIKQVSQAQTTVQPTTTLQRSPGVQPQLVLGGSAQPASLGTA
TAVQAGTPQRTVPGTSTTSTAATETMENVKKCKSFLSTLIKLASSGKQSTETAANVKDLV
QSLLDGKIEAEDFTSRLYRELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQQQQPP
ASQATTALTAVVLSSSVQRTAGKTAASVTSALQPPVISLTQPTQVGVGKQAPPTPLVIQQ
PPKPGALIRPPQVTLTQTPMVALRQPHNRIMLTTPQQIQLNQLQPVPVVKPTVLPGTKAL
STVSAQAAAAQKNKLKEPGGGSFRDDDDINDVASMAGVNLSEESARILATNSELVGTLTR
SCKDDTFLLPAPLQRRMLEIGKKHGITELHPDVVSYVSHATQQRLQNLVEKISETAQQKN
FSYKDDDRYEQASDVRAQLKFFEQLDQIEKQRKDEQEREILMRAAKSRSRQEDPEQLRLK
QKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKVDCTGPGSGAEGSGPGAAVPGGSGVG
TPRQFTRQRITRVNLRDLIFCLENERETSHSLLLYKAFLK
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggctcggatctgctggacgaggtcttctttaacagcgaggtggacgagaaa
gtggtgagcgatctggtgggctcgctcgagtcgcagctggcggccagcgcggcccaccac
caccacctcgcgccgcgcacgcccgagctgcgggccgcggccgccggcgcgctcgggaac
catgttgtgagcggcagcccggccggagccgcgggcgcagggccggccgcctccgccgag
ggcgcgcccgcagcggcgccggagccgccccccgcaggtagagcgcggccggcgggtggg
ggcccgcggcgcccgggctccagctcaccgcgccgcttgcttgtccccgcaggcgggccc
gccatgccgggcgcgctgccggggcctgcgcccgggacccccgtggggctggcgaagggt
gcggccgcggcgacccccagcctgcctcggacgccggcggccaccaccggcgctatcagg
gccacgctgacgcccaccgtgctggccccgcgcctgccgcagccgccgcagaacccgacc
aacatccagaacttccagctgcccccaggaatggtcctcgtgcggagtgagaatgggcag
ttgttaatgatccctcagcaggccctggcccagatgcaggcccatgcccaggcccagcct
cagagtaccatggcaccccgtcctgcaacccccacaggtgctccacctgtccagatctcc
accgtgcaggctccaggaacacctattattgcacggcaggtgaccccaactaccataatt
aagcaagtgtctcaggcccagacgacggtacagcccactacaaccctacagcgatctccc
ggggtacagcctcagctggttctgggtggctccgcacagccagcctcacttggaacagcc
acagctgttcaggcagggacacctcaacgaacagtccctgggaccagcaccacctctaca
gctgccacggaaactatggaaaatgtgaaaaagtgcaaaagttttctatctacattaata
aaactggcttcctctggtaaacagtctacagagacagcggctaatgtgaaagacttagta
caaagcttactggatgggaaaattgaagcagaagatttcactagcaggttatatcgagaa
ctgaactcttcacctcagccttaccttgtgcctttcctgaagaggagcttacctgccttg
agacagctgaccccagactccgcggcctttattcagcagagccagcagcagcagccgccc
gcctcgcaggctacgactgcactgacggctgtggtgctgagcagctcagtgcagcgtaca
gctgggaagacagctgcctcggtgaccagcgccctccagcccccggtcatcagcctcacg
cagcccacacaggttggcgttggcaagcaggcaccgcccacaccactggtgatccagcag
cccccgaagcctggagccttgatccggcccccgcaggtgaccttgacgcagacacccatg
gtcgcattgcggcagcctcacaaccggatcatgctcaccacaccacagcagatccaactg
aaccagctgcagccagtccctgtggtgaaacccaccgtgttacctggaaccaaagccctt
tctactgtatctgcacaagcagctgctgcacagaaaaacaagctcaaggagccgggggga
ggctcctttcgggacgatgatgacatcaatgatgttgcgtcaatggctggagtgaacctg
tctgaagaaagtgcaaggatattagccacaaactctgagttggtggggacgctgacccgg
tcctgtaaggacgacaccttcctcctccccgcgcctttgcagaggaggatgctggagata
ggtaaaaagcacggcatcacggaactgcatccagatgtagtgagttacgtgtctcatgcc
acacagcaaaggctgcagaatcttgtagaaaaaatatctgaaacggctcagcagaaaaac
ttctcttataaggacgacgacagatatgagcaagcgagtgatgtccgggctcagctcaaa
ttctttgaacaactggatcagattgaaaagcagaggaaagatgagcaggagagggagatc
ttaatgcgggcagcaaagtctcgatccagacaagaagacccagagcaattaaggttgaag
cagaaagcaaaagagatgcagcagcaggagctggcacagatgcgacaacgagatgccaac
ctcactgcactggcagcgatcgggcccaggaaaaagaggaaagtggactgcactgggcca
ggatcaggagcagagggctcaggcccaggcgcagcagtcccaggcggctccggcgtggga
acccccagacagttcacacggcaaagaatcacgcgggtcaacctcagggacctcatattt
tgtttagaaaatgagcgtgagacaagccattcactgttgctctacaaagcattccttaaa
taa
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