Mus pahari (shrew mouse): 110318113
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Entry
110318113 CDS
T05929
Symbol
Ssrp1
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpah03000
]
110318113 (Ssrp1)
03036 Chromosome and associated proteins [BR:
mpah03036
]
110318113 (Ssrp1)
Transcription factors [BR:
mpah03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
110318113 (Ssrp1)
Chromosome and associated proteins [BR:
mpah03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
110318113 (Ssrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
bPH_2
Motif
Other DBs
NCBI-GeneID:
110318113
NCBI-ProteinID:
XP_021048536
Ensembl:
MGP_PahariEiJ_G0025190
LinkDB
All DBs
Position
3:70345344..70355442
Genome browser
AA seq
708 aa
AA seq
DB search
MAETLEFNDIFQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH
GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS
FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEGINPGYDDYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEETDE
SFNPGEEEEDVAEEFDSNASASSSSNEGDSDREEKKRKQLKRAKMAKDRKSRKKSSEVKK
GKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWDRKA
EDARREYEKAMKEYEGGRGDSAKRDKSKKKKKVKAKMEKKSTPSRGSSSKSSSRQLSDSF
KSKEFVSSDESSSGENKSKKKRRRSEDSEEELASTPPSSEDSASGSDE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggcagagacattggagttcaacgacatcttccaggaggtgaaagggtccatgaatgat
gggaggcttcgattgagccgtcagggtatcatctttaagaacagcaagacgggcaaagtg
gacaacatccaggctggggagttgacagaaggcatctggcgtcgggtagcattaggccat
gggcttaaactgctcacaaagaatgggcatgtctacaagtacgatggcttccgcgaatcg
gagtttgagaaactctctgacttcttcaaaactcactatcgccttgagctaatggagaag
gatctgtgtgtgaagggctggaactgggggacagtgaagtttggtggacagctgctttct
tttgacattggtgatcaaccagtctttgagatacccctaagcaatgtgtcccagtgtacc
acaggcaagaatgaggtgaccctggaattccaccagaatgacgatgctgaagtatctctc
atggaggtgcgcttctatgtccctcccacgcaggaagatggtgtggaccctgtggaggcc
tttgcccagaatgttctgtcaaaggcagatgtgatccaggccaccggagatgccatctgc
atcttccgggagctgcagtgtttgactcctcgcggtcgatacgatatccggatctaccct
acctttctgcacctgcacggcaagacctttgactacaagatcccctatactaccgttctc
cgtctcttcctgctaccacacaaggatcagagacagatgttctttgtgatcagcctggac
cctcccatcaagcagggccaaactcggtaccacttcctgatcctcctcttctccaaggac
gaggacatctccttgactctcaacatgaatgaggaagaagtagaaaagcgctttgagggg
cgacttaccaagaacatgtcaggatccctctatgaaatggtcagccgggtcatgaaagca
cttgtcaaccgtaaaatcactgtcccaggcaatttccaagggcactcaggggcccagtgt
atcacctgctcctacaaggccagttcaggactcctgtacccactggagcggggcttcatc
tatgtgcacaagccccccgtgcacatccgcttcgatgagatctcttttgtcaactttgcc
cgtggcaccacgaccactcgttccttcgactttgagattgagaccaagcaaggcactcag
tataccttcagcagcattgagagggaggagtatggaaagcttttcgattttgtcaatgcg
aaaaagctcaacatcaagaaccgaggactgaaagagggcattaacccaggctatgacgac
tatgctgactctgatgaagaccagcatgatgcctatttggagaggatgaaggaggagggc
aagatccgggaggagaatgctaatgacagcagcgatgactcaggagaagagactgatgag
tccttcaatcctggtgaagaagaagaagatgtggcagaggagtttgacagcaatgcctct
gccagctcctccagcaatgagggtgacagtgaccgtgaagagaagaaacggaaacagctc
aaaagggccaagatggccaaggatcgaaagagccgcaagaagtcttctgaggtgaagaag
ggtaaagatccaaatgcgccaaagaggcctatgtctgcgtacatgttgtggcttaatgca
agccgcgagaagatcaagtcggatcaccctggcatcagcatcacagatctttccaagaag
gcaggcgaaatctggaagggaatgtccaaagagaagaaagaggagtgggaccgcaaggct
gaggatgctaggagggagtacgagaaagccatgaaagagtatgaaggaggaagaggggac
tcggctaaaagggacaagtctaagaagaaaaagaaagtaaaagcaaagatggaaaaaaaa
tccactccttcccggggctcgtcatccaagtcttcgtccaggcagttgagtgacagcttc
aagagcaaagagtttgtgtccagtgatgagagctcttccggcgagaacaagagcaaaaag
aagaggaggcggagcgaggactctgaagaggaactagccagcacccctccaagctccgaa
gactctgcctcaggatctgatgaataa
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