Mus pahari (shrew mouse): 110318133
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Entry
110318133 CDS
T05929
Symbol
Tp53bp1
Name
(RefSeq) TP53-binding protein 1 isoform X1
KO
K20915
tumor suppressor p53-binding protein 1
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
110318133 (Tp53bp1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
53-BP1_Tudor
BRCT_3
BRCT_2
BRCT
Tudor_5
DUF4537
RTT107_BRCT_5
SH3_Hsr9
Tudor_2
Motif
Other DBs
NCBI-GeneID:
110318133
NCBI-ProteinID:
XP_021048580
Ensembl:
MGP_PahariEiJ_G0025628
LinkDB
All DBs
Position
3:complement(104627416..104730327)
Genome browser
AA seq
1968 aa
AA seq
DB search
MPGEQMDPTGSQLDSDFSQQDTPCLIIEDSQPESQVLEEDAGSHFSVLSRHLPNLQMHKE
NPGLEIVSTLEQAPAEQGDSNRSFNEHLKEKKAADPVESSHLGTSGSISQVIDRLPQPNR
TSSALGVTVEAASPPEEEKEEEELEEEKEEVGAKAPGADTHPLAAEDSASSQLGFGVLEL
SQSQDVEEHTVPYDVNQEHLQLVTTNSGSSQLSDVDASTAIKCEEQPTEDISMIEQPSKD
IPGTVQPSKGIQAVEEQNPPLVRSEDPPSSPQVSVAAVETKEQVPARELLEEGPQVQPSS
VPEVSSTQEDLFEQSSRTASDGCSTPSREEGGCSPVSTPATTLQLLQPSGQKPLVQESLS
TNSSDLVAPSPDAFRSTPFIVPSSPTEQGGRKDEPMDMSVIPAGGEPFQKLHDDEAMEME
KPLLPSHPAVSPQASTPVSQSTPVFTPGSLPIPSQPEFSHDIFIPSPSLEEPSDDVKKGG
GLHSSSLTVECSKTSESEPKNFTDDLGLSMTGDSCKLMLSTSEYSQSSKMESLGSPRTEE
DGENTQVDDTESSSPVTNSKLPAESENVLVTPSQDDQVEMSQDVDKVKEDETEDRGDIGV
LAADCKVREDTVAEDVCIDLTCDSGSQAVPSPATRSEALSSVLDQEEAMEIKEHHPEEGF
SGSEVEEVPETPCGSHREEPKEEPMENIPLHLSLTETQSEALCLQKEAPKEECPEAMEIE
TSVISIDSPQKLPALDQELEHKDQDTWEEGTSEDSSVVIVDVKEPSPRVDVSCEPLEGVE
KCSDSQSWGGVAPEEENRLDTPEEKSVECDGDSKAEATEKDSVTEDSPQPPLPSVRDEPV
RPDQETQQPQVQEKESPVTIDAEVADDKQLGSDGICQQLEKASARASQSFCESSSETPFH
FTLPKEGDIIPPLTGATPPLIGHLKLEPKRHSTPIGISNYPESTIATSDVMSESMVEIND
PLLGNEKGDSESAPEMDGKLSLKMKLVSPETEASEESLQFSLEKPTTAERKNGSTAIAEP
VASPQKPVPVFGCIYEAQQEKEAQSEAPPSVPARANLLHFPSAQEEDKEKPDVTSKLRQS
EQPVKPIGPVTDDAASEDSASSVSQQRASQGSFSPGEEVMETDLLEGLGANQDRPSKMLM
ERPTQSNIGIQTVDHSLCAPETVSAATQTVKSVCEQGTSTVEQNSGKQDATVQTERGSGE
KAASAPVDDTESLHSQGEEEFEMPQPPHGHVLHRHMRTIREVRTLVTRVITDVYYVDGTE
VERKITEETEEPIVECQECETEVSPSQTGGSSGDLGDISSFSSKASSSHHTSSGTSLSAI
HSSGSSGRGAGPLKGKASGTEAADFALPSSRGGPGKLSPRKGISQTGAPVCEEDGDAGLG
IRQGGKAPVTPRGRGRRGRPPSRTTGTRETVVSGPLGAEDISPSMSPDDKSFTRVMPRVP
DSTKRTDAGSSALRRSDSPEIPFQAATGSSDGLDSSSSGNSFVGLRVVAKWSSNGYFYSG
KITRDVGAGKYKLLFDDGYECDVLGKDILLCDPIPLDTEVTALSEDEYFSAGVVKGHRKE
SGELYYSIEKEGQRKWYKRMAVILSLEQGNRLREQYGLGPYEAVTPLTKAADISLDNLVE
GKRKRRSNISSPATPTASSSSSTTPTRKATESPRASTGVPSGKRKLPTSEEERSPAKRGR
KSATVKPGTVGAAEFVSPCETGDNTGEPSVLEEPRGPLPLNKTLFLGYAFLLTMATTSDK
LASRSKLLDGPTGSSEEEEEFLEIPPFNKQYTECQLRAGAGYILEDFNEAQCNTAYQCLL
IADQHCRTRKYFLCLASGIPCVSHVWVHDSCHANQLQNYRNYLLPAGYSLEEQRILDWQP
RENPFQNLKVLLVSDQQQNFLELWSEILMTGGAASVKQHHSSAHNKDIALGVFDVVVTDP
SCPASVLKCAEALQLPVVSQEWVIQCLIVGERIGFKQHPKYKHDYVSH
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atgccaggggagcagatggaccctactggaagtcaattggattcagatttctctcagcaa
gacactccttgcctgataatagaagattcccagcctgaaagccaggttctggaagaagat
gcaggttctcacttcagcgtgctatctcgacaccttcctaatctgcagatgcacaaagag
aaccccgggttggagattgtgtcaactctggaacaagctcctgcagaacaaggggacagt
aatcgctcgtttaatgaacatctgaaagaaaagaaagctgcagaccctgtggagtcttct
catttgggtacgagtggttccatcagtcaggtcattgaccggttacctcagccaaacagg
acaagcagtgctctgggagtgacagtagaagctgcttctcccccagaggaggagaaggaa
gaagaagagttggaggaggagaaggaagaggtgggagcaaaggctcccggtgctgacaca
cacccccttgctgctgaagattctgcttcatcacagttgggctttggagttctggaactg
tcccagagccaggatgttgaagaacatacagtgccatatgatgtcaaccaagagcatctg
cagttggtaaccactaactcgggttctagccagctgtctgatgtggatgcgagcactgca
attaaatgtgaagaacagcccactgaagatatctccatgatagaacaacccagcaaagat
atccctggtacagtgcagcccagtaaaggtatccaggcagtagaagaacaaaatccacca
ctcgtaaggtctgaagacccgccttccagtcctcaagtttctgttgctgctgtggaaaca
aaggaacaggtacctgcccgggagctgctggaagaggggccgcaggttcagccgtcatca
gtgcctgaggtttcctcaactcaggaggacttgtttgagcagagcagtagaacagcttct
gatggttgttctactccttcaagggaggaaggtgggtgctctccggtttccacacctgct
accaccctgcagctcctgcagccctctggtcagaagcccctcgttcaggagagcctttcc
acgaattcctcagatcttgttgctccttcccctgatgctttccgatccaccccttttatc
gttcctagcagtcccacagagcaaggagggagaaaagatgagcccatggatatgtcagtg
atacctgcaggaggggagcctttccagaagcttcatgatgatgaagcaatggagatggaa
aaaccccttctcccatctcatcctgctgtgtcaccgcaagcatcaacaccagtgtctcag
agcacgccagttttcactcctggctcgcttcccatcccgtcccagcccgagttctctcat
gacattttcattccatcaccaagtttggaagaaccgtcagatgatgtgaagaaaggtgga
ggtttgcatagctcatctctcactgttgagtgttccaagacttcagagagtgaaccaaag
aatttcactgatgaccttgggctctccatgacaggggattcttgcaaactgatgctttct
acaagtgagtatagtcagtcctcaaagatggagagcttgggttctcccaggactgaggaa
gacggagagaacacacaggttgatgatactgaatcttcgtctccagttaccaattctaaa
cttcctgctgaaagtgagaatgtcttggtgactccatcacaggacgaccaggtagaaatg
agtcaggatgtagataaagtaaaagaggatgaaacagaggacagaggtgacattggtgtt
ttagctgctgactgtaaagtcagagaagacacggttgctgaagatgtttgcatcgacctc
acttgtgattctgggagtcaggcagttccttctccagctacccgctcggaggccctttcc
agtgtcttagatcaggaggaagctatggaaattaaagaacaccatccagaggaagggttt
tcgggatctgaagtagaagaagtccctgagactccctgtggaagtcacagagaggagccc
aaagaagaaccgatggaaaatatcccactgcacctttctctgactgaaactcagtctgag
gcattgtgtctgcagaaggaagcccccaaagaggaatgcccagaagctatggaaattgaa
accagcgtgattagtattgactccccccagaaactgccagcacttgaccaggaattagaa
cataaggatcaggacacttgggaagaaggtacttctgaggactccagtgttgttatcgtt
gatgtgaaggagccctctcctcgagttgacgtttcctgtgaacctttggagggagtggag
aaatgctcagactcccagtcctgggggggtgtggcaccagaggaagagaatagattagat
actccagaggagaagagtgtagagtgtgatggagactcaaaagcagaggccacagaaaag
gactctgtaacagaagactctccacaacctcctttgccttcagtgagagacgaacctgtc
agacctgatcaggagacacagcagccccaagttcaagagaaagagagcccagtgaccata
gatgcagaagtggctgatgacaagcagctgggatcagacggcatatgccagcagcttgag
aaggcctctgcccgtgcctcacaaagtttctgtgaaagttctagtgaaaccccatttcat
ttcactttgcctaaagaaggtgatattatcccaccactgactggcgcaaccccacctctt
attgggcacctaaaattggagcccaagagacatagtactcctattgggattagtaactat
ccagaaagcaccatagcaaccagtgacgtcatgtctgaaagcatggtggagatcaatgat
cctctactggggaatgaaaaaggggattctgagtctgccccagaaatggatggaaaactg
tctctgaaaatgaaactggttagtcctgagacagaggccagtgaagaatctttgcaattt
agcctggaaaagcctacaactgctgagagaaaaaatggatctactgccattgcagagcct
gttgccagtccccagaagcccgtgcctgtgtttggctgcatctatgaagcccagcaagag
aaggaggctcaaagtgaggctcctccctctgtacccgccagggcgaatttgctccatttt
ccaagtgctcaagaagaagacaaagaaaaaccagatgttacttcaaagctcaggcagagt
gaacagcctgtgaagcctattgggcctgtcacagacgatgctgcttctgaggactctgcc
tcttccgtttcccagcagagggcctcacaggggtccttcagtcctggagaggaagtgatg
gaaacagacctgctggaaggactgggtgctaaccaagacagacctagtaagatgttgatg
gaaaggcccacccagagcaacatcggtatccagaccgtggaccattccctctgtgcccca
gaaactgtctccgcagcaacacaaactgtgaagagtgtgtgtgagcaggggaccagtaca
gtggagcagaactctgggaaacaagatgccactgtgcagacagagaggggtagtggagag
aaagccgccagtgctcctgtggacgacacagagtccctccacagccagggggaagaagaa
tttgaaatgccccagcctccgcatggccatgtcttgcatcgccacatgagaaccattcga
gaagtccgtacactcgtcacccgtgtcatcacagatgtttattatgtggatgggacagaa
gtggaaaggaaaataacagaggagactgaagaaccaatcgtagagtgtcaggaatgtgaa
acagaagtttccccttcacagactggaggttcctctggggacctgggggacatcagctcc
ttctcctccaaagcttccagctcacaccacacatccagtggaacaagtctctcagccata
cacagcagtggcagctcagggcgaggagctgggccactcaaaggaaaagccagtgggaca
gaagctgcagattttgccttacccagttcccgaggaggcccaggaaaactgagtcctaga
aaagggatcagtcagacaggggcaccggtgtgtgaggaagatggtgatgcaggccttggc
atcagacagggagggaaggctccagttacacctcgtgggcgtgggcgaaggggccgtcca
ccttctcggaccactggaaccagagaaacggttgtgtctggtccgttgggcgcagaagat
atttcacctagcatgtccccagatgacaaatccttcacccgcgttatgcctcgtgtgcca
gattctaccaaacggacggatgccggctctagtgctttgcggcggagtgattctccagag
attccttttcaggctgctactgggtcctctgatggcttggattcctcatcttcaggaaac
agctttgtggggctccgtgttgtagccaagtggtcatccaatggctacttttactctggg
aagatcacccgagatgtgggagctgggaagtacaagctgctctttgatgatgggtacgaa
tgtgatgtgttgggcaaagacattctcctgtgtgaccccatccccctggacactgaagtg
acagccctctcagaagatgagtatttcagtgcaggagtggtgaaaggacataggaaggag
tctggggagctgtattacagcattgaaaaagaaggccaaaggaagtggtataaacgaatg
gcagtcattctgtccttggagcaaggaaacagactgagagagcaatatgggcttggccca
tatgaagctgtcacaccgctcacgaaggcagcagatatcagcttagacaatttggtggaa
ggaaagcggaaacggcgcagtaacattagctccccagccacccccactgcctccagtagc
agcagcacaacgcccacacgtaaagccacagagagtccccgtgcttccaccggagtcccg
tcaggcaaaaggaaacttccgacttctgaagaggaacgctcccctgctaagcgaggtcga
aagtctgccaccgtgaaacctggaacagtgggggcagcagagtttgtgagcccctgtgaa
actggagacaacacaggtgagccttctgtcctggaagagccaagagggcctttgcccctc
aacaagactttgtttctgggctatgcctttctcctcaccatggctacaaccagtgacaag
ctggccagtcgttctaagctgctagatggtcctacaggaagcagtgaagaggaggaggaa
tttttagaaattcctcctttcaacaagcagtatacagaatgccagcttcgagcaggagct
gggtatatccttgaagacttcaatgaagcccagtgtaacacagcctaccagtgtctcctg
attgcggaccagcactgtcgaacccggaagtacttcttgtgccttgccagtggcattcct
tgtgtgtctcatgtctgggtccatgacagttgccatgctaaccaacttcaaaactatcgt
aattatctgctgcctgctgggtatagccttgaggagcaacgaattctggattggcaaccc
cgtgaaaaccctttccagaatctgaaggtcctcttggtgtcagatcaacaacagaacttc
ttggagctctggtctgagatccttatgactggaggggcagcctctgtgaagcagcaccat
tcaagtgcccataacaaagacattgctttaggggtatttgatgtggtggtgacagacccc
tcatgcccagcctcggtgctcaagtgtgctgaagccttgcaactgcctgtggtatcacaa
gaatgggtgatccagtgcctcattgttggggagagaattggattcaagcagcatccaaaa
tataaacatgattatgtttctcactaa
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integrated database retrieval system
