Mus pahari (shrew mouse): 110318181
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Entry
110318181 CDS
T05929
Symbol
Nelfcd
Name
(RefSeq) negative elongation factor C/D
KO
K15181
negative elongation factor C/D
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110318181 (Nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpah03021
]
110318181 (Nelfcd)
Transcription machinery [BR:
mpah03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
110318181 (Nelfcd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
110318181
NCBI-ProteinID:
XP_021048664
Ensembl:
MGP_PahariEiJ_G0026200
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Position
3:156719860..156731474
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AA seq
591 aa
AA seq
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MAGPSPGTIMGEDYFGNASEWGEEADGGQHQEDDSGEGEDDAEVQQECLHKFSTRDYIME
PSIFNTLKRYFQAGGSPENVIQLLSENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENHL
KSLLIKHFDPRKADSIFTEEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLI
SDAGYQGEITSVPTACQQLEVFSRVLRTSLATILDGGEENLEKNLPEFAKMVCHGEHTYL
FAQAMMSVLAQEEQGGSAVRRVAQEVQRFAQEKGHDASQITLALGTAASYPRACQALGAM
LSRGALNPADITVLFKMFTSMDPPPVELIRVPAFLDLFMQSLFKPGAKINQDHKHKYIHI
LAYAASVVETWKKNKRVSIGKDELKSTSKAIETVHNLCCNENKGASELVAELSTLYQCIR
FPVVAMGVLKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLVKLFET
EHSQLDVMEQLELKKTLLDRMVHLLSRGHVLPVVSYIRKCLEKLDTDISLIRYFVTEVLD
VIAPPYTSDFVQLFLPILENDSIAGTIKAEGEHDPVTEFIAHCKSNFIVVN
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtccgtcgccgggtactattatgggagaagactacttcgggaatgcgtcagag
tggggcgaagaggcggacggcggccagcatcaggaagatgattccggagaaggagaagac
gatgctgaggtgcagcaggaatgtctgcataagttttccacccgggactacatcatggag
ccctccatcttcaacactctgaagaggtatttccaggcaggggggtctccagaaaatgtc
atccagctcttatctgagaactatacggcggtggcccagaccgtgaacttgctggctgag
tggctcattcagacaggtgttgagccggtgcaggtacaggagactgtggaaaaccacttg
aagagtttgctgatcaagcacttcgaccctcggaaagcagattctattttcacagaagaa
ggagagaccccagcttggcttgagcagatgatcgcacacacaacatggagagatctgttt
tataagttggccgaggcccatcctgactgtttgatgctcaacttcactgtgaagctcatt
tctgatgcggggtaccaaggggagattaccagcgtgcccacagcctgccagcagttggaa
gtgttctccagagtgcttcggacctctctagccacaatcctggatgggggagaagaaaac
cttgagaaaaaccttcctgagtttgcaaagatggtatgccatggcgagcacacgtacctg
tttgcacaggccatgatgtccgtgctggcccaggaggaacagggtggttctgcagtgcgc
agggtcgctcaggaagtccagcgcttcgcccaggagaagggccatgatgccagtcagatc
acgctggccttgggcacagctgcctcctacccccgtgcctgccaagcacttggcgccatg
ttgtccagaggagccctgaatcctgcagacatcacggtcttgttcaagatgttcactagc
atggaccctcctcctgtggaacttatccgggtgccagccttcctggacctcttcatgcag
tcgctcttcaagccaggggccaagatcaaccaggaccacaagcacaagtacatccatatc
ctggcctacgctgccagtgtggttgagacctggaagaagaacaagcgggtcagcattggc
aaagacgagctcaagtccacgtcaaaggctatagaaactgtccacaacctgtgctgcaat
gagaacaaaggggcctctgagctggtggcggagctgagcacactttatcagtgcattagg
tttccagtggtggcgatgggcgtgctcaagtgggtagattggaccgtgtcagagccaagg
tacttccagctacagactgatcacactccagttcacctggccttgttggatgagatcagc
acctgccaccagctcctgcacccccaggttctgcagctgcttgttaagctttttgagact
gagcattcccagctagacgtgatggagcagctcgagttgaaaaagaccctgctagacagg
atggtgcacctgctgagccgcggccacgtccttccggtggtcagttatatccgcaaatgt
ctggagaagctggacactgacatctccctcatccgctactttgtcactgaggttctggat
gttatcgcccctccatatacctcagactttgtgcaacttttcctccccatcttggaaaat
gacagcatcgcgggcaccatcaaggcagagggcgagcatgaccccgtgacggagttcatt
gctcactgcaagtctaacttcatcgtggtgaactga
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