KEGG   Mus pahari (shrew mouse): 110318181
Entry
110318181         CDS       T05929                                 
Symbol
Nelfcd
Name
(RefSeq) negative elongation factor C/D
  KO
K15181  negative elongation factor C/D
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110318181 (Nelfcd)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mpah03021]
    110318181 (Nelfcd)
Transcription machinery [BR:mpah03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     110318181 (Nelfcd)
SSDB
Motif
Pfam: TH1
Other DBs
NCBI-GeneID: 110318181
NCBI-ProteinID: XP_021048664
Ensembl: MGP_PahariEiJ_G0026200
LinkDB
Position
3:156719860..156731474
AA seq 591 aa
MAGPSPGTIMGEDYFGNASEWGEEADGGQHQEDDSGEGEDDAEVQQECLHKFSTRDYIME
PSIFNTLKRYFQAGGSPENVIQLLSENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENHL
KSLLIKHFDPRKADSIFTEEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLI
SDAGYQGEITSVPTACQQLEVFSRVLRTSLATILDGGEENLEKNLPEFAKMVCHGEHTYL
FAQAMMSVLAQEEQGGSAVRRVAQEVQRFAQEKGHDASQITLALGTAASYPRACQALGAM
LSRGALNPADITVLFKMFTSMDPPPVELIRVPAFLDLFMQSLFKPGAKINQDHKHKYIHI
LAYAASVVETWKKNKRVSIGKDELKSTSKAIETVHNLCCNENKGASELVAELSTLYQCIR
FPVVAMGVLKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLVKLFET
EHSQLDVMEQLELKKTLLDRMVHLLSRGHVLPVVSYIRKCLEKLDTDISLIRYFVTEVLD
VIAPPYTSDFVQLFLPILENDSIAGTIKAEGEHDPVTEFIAHCKSNFIVVN
NT seq 1776 nt   +upstreamnt  +downstreamnt
atggcgggtccgtcgccgggtactattatgggagaagactacttcgggaatgcgtcagag
tggggcgaagaggcggacggcggccagcatcaggaagatgattccggagaaggagaagac
gatgctgaggtgcagcaggaatgtctgcataagttttccacccgggactacatcatggag
ccctccatcttcaacactctgaagaggtatttccaggcaggggggtctccagaaaatgtc
atccagctcttatctgagaactatacggcggtggcccagaccgtgaacttgctggctgag
tggctcattcagacaggtgttgagccggtgcaggtacaggagactgtggaaaaccacttg
aagagtttgctgatcaagcacttcgaccctcggaaagcagattctattttcacagaagaa
ggagagaccccagcttggcttgagcagatgatcgcacacacaacatggagagatctgttt
tataagttggccgaggcccatcctgactgtttgatgctcaacttcactgtgaagctcatt
tctgatgcggggtaccaaggggagattaccagcgtgcccacagcctgccagcagttggaa
gtgttctccagagtgcttcggacctctctagccacaatcctggatgggggagaagaaaac
cttgagaaaaaccttcctgagtttgcaaagatggtatgccatggcgagcacacgtacctg
tttgcacaggccatgatgtccgtgctggcccaggaggaacagggtggttctgcagtgcgc
agggtcgctcaggaagtccagcgcttcgcccaggagaagggccatgatgccagtcagatc
acgctggccttgggcacagctgcctcctacccccgtgcctgccaagcacttggcgccatg
ttgtccagaggagccctgaatcctgcagacatcacggtcttgttcaagatgttcactagc
atggaccctcctcctgtggaacttatccgggtgccagccttcctggacctcttcatgcag
tcgctcttcaagccaggggccaagatcaaccaggaccacaagcacaagtacatccatatc
ctggcctacgctgccagtgtggttgagacctggaagaagaacaagcgggtcagcattggc
aaagacgagctcaagtccacgtcaaaggctatagaaactgtccacaacctgtgctgcaat
gagaacaaaggggcctctgagctggtggcggagctgagcacactttatcagtgcattagg
tttccagtggtggcgatgggcgtgctcaagtgggtagattggaccgtgtcagagccaagg
tacttccagctacagactgatcacactccagttcacctggccttgttggatgagatcagc
acctgccaccagctcctgcacccccaggttctgcagctgcttgttaagctttttgagact
gagcattcccagctagacgtgatggagcagctcgagttgaaaaagaccctgctagacagg
atggtgcacctgctgagccgcggccacgtccttccggtggtcagttatatccgcaaatgt
ctggagaagctggacactgacatctccctcatccgctactttgtcactgaggttctggat
gttatcgcccctccatatacctcagactttgtgcaacttttcctccccatcttggaaaat
gacagcatcgcgggcaccatcaaggcagagggcgagcatgaccccgtgacggagttcatt
gctcactgcaagtctaacttcatcgtggtgaactga

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