Mus pahari (shrew mouse): 110318183
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Entry
110318183 CDS
T05929
Symbol
Rtf1
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
mpah
Mus pahari (shrew mouse)
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpah03021
]
110318183 (Rtf1)
Transcription machinery [BR:
mpah03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
110318183 (Rtf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
110318183
NCBI-ProteinID:
XP_021048670
Ensembl:
MGP_PahariEiJ_G0025592
LinkDB
All DBs
Position
3:103104371..103161757
Genome browser
AA seq
715 aa
AA seq
DB search
MRGRLCVGRAAAVAAAVAAAAVAVPLAGGQEGSPGGVRRGSRGTTMVKKRKGRVVIDSDT
EDSGSDENLDQELLSLAKRKRSDSEEKEPPVSQPAASSDSETSDSDDEWTFGSNKNKKKG
KARKVEKKGAMKKQANKAASSGSSDRDSSAESSAPEEGEVSDSDSNSSSSSSDSDSSSED
EEFHDGYGEDLMGDEEDRARLEQMTEKEREQELFNRIEKREVLKRRFEIKKKLKTAKKKE
KKEKKKKQEEEQEKKKLTQIQESQVTSHNKERRSKRDEKLDKKSQAMEELKAEREKRKNR
TAELLAKKQPLKTSEVYSDDEEEEDDDKSSEKSDRSSRTSSSDEEEEKEEIPPKSQPVSL
PEELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNHNSKPVYRVAEITGVVETAKVY
QLGGTRTNKGLQLRHGNDQRVFRLEFVSNQEFTESEFMKWKEAMFSAGMQLPTLDEINKK
ELSIKEALNYKFNDQDIEEIVKEKERFRKAPPNYAMKKTQLLKEKAMAEDLGDQDKAKQI
QDQLNELEERAEALDRQRTKNISAISYINQRNREWNIVESEKALVAESHNMRNQQMDPFT
RRQCKPTIVSNSRDPAVQAAILAQLNAKYGSGVLPDTPKEMSKGQGKDKDLNSKSASDLS
EDLFKVHDFDVKIDLQVPSSESKALAITSKAPPAKDGAPRRSLNLEDYKKRRGLI
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtcgcctttgtgtgggtcgagcggcggcggtggcggcggcggtggcggcggcg
gcagtggcggtcccactggcaggcgggcaagaggggagtccgggcggcgtccggcgtgga
agccgggggaccaccatggtaaagaagcggaaaggccgtgtcgtgatcgactcggatacg
gaagacagcggcagcgacgagaacctggatcaggagctcttgtccctggcaaaacggaag
cgcagtgattctgaggagaaggagcctcctgtgagtcagcctgcagcctcatcagattca
gagacctccgacagtgatgatgagtggacatttgggagcaataaaaataagaagaaagga
aaagccagaaaagtagagaagaaaggagccatgaagaagcaagccaacaaagctgcctcc
tcgggcagctcagacagagacagctcagctgagagctctgcccctgaggaaggtgaagtg
tcagattctgacagcaacagctcctcttccagttcagattcagactcctcgtcagaagat
gaagagttccatgatggctatggagaggatctcatgggagatgaggaagacagggcccga
ctggagcagatgacagaaaaggagagggagcaggaactcttcaaccgcatagagaagaga
gaggtgttgaaaaggagatttgaaattaagaaaaaactaaaaactgccaaaaagaaagaa
aagaaagaaaaaaagaaaaagcaggaagaagaacaagaaaagaagaagctgacacagatt
caggaatctcaggttacttcccacaataaagaacggcgttccaagcgggatgagaaacta
gataagaaatctcaagccatggaggagctaaaagcagagcgggaaaaacggaagaacaga
acagctgagcttcttgccaaaaaacagccattgaaaaccagtgaggtctactctgatgat
gaggaggaggaagatgatgacaagtccagtgagaaatcagaccgctcatcccgaacgtca
tcatctgatgaagaagaagagaaagaagaaatccctccaaaatcacagccagtctcatta
cctgaggaactgaatcgggttcggttatcacggcataagctagagcgctggtgtcacatg
cccttctttgctaaaactgtcacaggatgttttgtacggattggtattggaaaccacaat
agcaagccagtttaccgggtggctgagatcacgggggttgtggaaactgccaaagtttac
cagctgggtggcaccagaacaaataaagggctccagctacggcatggcaatgaccagcga
gtgttccgcctagagtttgtgtccaaccaagaattcactgaaagtgaattcatgaagtgg
aaagaagcgatgttttctgctggcatgcagttgcccacactagatgaaatcaataagaag
gaattatctattaaggaagctctcaattataaattcaatgatcaggacattgaggagatt
gtaaaagagaaagagaggttcagaaaagctccaccaaactatgctatgaagaagactcag
ctgctaaaggaaaaggccatggctgaggacctgggagaccaggacaaagccaaacaaatc
caagaccagctgaatgagctagaggaacgggcagaggccctggaccgccagcggaccaag
aacatatctgctatcagttacatcaaccagcggaatcgggagtggaatattgtggagtct
gagaaggctctggtggctgaaagtcacaacatgagaaaccagcagatggacccctttacc
aggcggcagtgcaaacccaccatcgtctccaattccagggatccagctgttcaggctgcc
attttggcccagctaaatgcaaaatacggttctggagtattaccggacactccaaaggaa
atgagcaagggtcaaggaaaggataaagatttgaattctaagtcagccagtgacctttcg
gaagacttgttcaaagtccatgactttgacgtgaagattgacttacaggttccaagctca
gagtcaaaagctttggctattacctccaaagccccaccagccaaggatggagctccaagg
agatctctgaacttagaagactacaaaaaacgacgggggctgatttga
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