KEGG   Mus pahari (shrew mouse): 110318209
Entry
110318209         CDS       T05929                                 
Symbol
Cacna1b
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
  KO
K04849  voltage-dependent calcium channel N type alpha-1B
Organism
mpah  Mus pahari (shrew mouse)
Pathway
mpah04010  MAPK signaling pathway
mpah04020  Calcium signaling pathway
mpah04721  Synaptic vesicle cycle
mpah04723  Retrograde endocannabinoid signaling
mpah04725  Cholinergic synapse
mpah04726  Serotonergic synapse
mpah04727  GABAergic synapse
mpah04728  Dopaminergic synapse
mpah04930  Type II diabetes mellitus
mpah05016  Huntington disease
mpah05020  Prion disease
mpah05022  Pathways of neurodegeneration - multiple diseases
mpah05032  Morphine addiction
mpah05033  Nicotine addiction
mpah05207  Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:mpah00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    110318209 (Cacna1b)
   04020 Calcium signaling pathway
    110318209 (Cacna1b)
 09150 Organismal Systems
  09156 Nervous system
   04727 GABAergic synapse
    110318209 (Cacna1b)
   04725 Cholinergic synapse
    110318209 (Cacna1b)
   04728 Dopaminergic synapse
    110318209 (Cacna1b)
   04726 Serotonergic synapse
    110318209 (Cacna1b)
   04723 Retrograde endocannabinoid signaling
    110318209 (Cacna1b)
   04721 Synaptic vesicle cycle
    110318209 (Cacna1b)
 09160 Human Diseases
  09161 Cancer: overview
   05207 Chemical carcinogenesis - receptor activation
    110318209 (Cacna1b)
  09164 Neurodegenerative disease
   05016 Huntington disease
    110318209 (Cacna1b)
   05020 Prion disease
    110318209 (Cacna1b)
   05022 Pathways of neurodegeneration - multiple diseases
    110318209 (Cacna1b)
  09165 Substance dependence
   05032 Morphine addiction
    110318209 (Cacna1b)
   05033 Nicotine addiction
    110318209 (Cacna1b)
  09167 Endocrine and metabolic disease
   04930 Type II diabetes mellitus
    110318209 (Cacna1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:mpah04040]
    110318209 (Cacna1b)
Ion channels [BR:mpah04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   110318209 (Cacna1b)
SSDB
Motif
Pfam: Ion_trans Ca_chan_IQ GPHH PKD_channel Ferlin_C
Other DBs
NCBI-GeneID: 110318209
NCBI-ProteinID: XP_021048708
Ensembl: MGP_PahariEiJ_G0024697
LinkDB
Position
3:complement(11726291..11901158)
AA seq 2332 aa
MVRFGDELGGRYGGTGGGERARGGGAGGAGGPGQGGLPPGQRVLYKQSIAQRARTMALYN
PIPVKQNCFTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPD
GDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILA
TAGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAII
GLEFYMGKFHKACFPNNTDTEPVGDFPCGKEPPARQCEDDTECREYWPGPNFGITNFDNI
LFAILTVFQCITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFA
KERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDVLKRAA
TKKSRNDLIHAEEGEERFADLCAVGSPFARASLKSGKTESSSYFRRKEKMFRFFIRRMVK
AQSFYWVVLCVVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLGPRS
YFRSSFNCFDFGVIVGSIFEVVWAAIKPGTSFGISVLRALRLLRIFKVTKYWNSLRNLVV
SLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTTNFDTFPAAILTVFQIL
TGEDWNAVMYHGIESQGGVSKGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTK
DEEEMEEAANQKLALQKAKEVAEVSPMSAANISIAARQQNSAKARSVWEQRASQLRLQNL
RASCEALYSEMDPEERLRYASTRHVRPDMKTHMDRPLVVEPGRDGLRGPVGSKSKPEGTE
ATESTDLPRRHHRHRDRDKTSATAPAGGEPDRTDCSKAESTETGTREERARPRRSHSKEA
PGADTQVRCERSRRHHRRGSPEEATEREPRRHRAHRHAQDSSKEGTAPVLVPKGERRARH
RGPRTGPREAENNEEPTRRHRARHKVPPTLQPPEREAAEKETNVVEGDKETRNHQPKGPH
CDLEAIAVTGVGPLHMLPSTCLQKVDEQPEDADNQRNVTRMGSQPSDPSTTVHVPVTLTG
PSGETPVVPSGNMNLEGQAEGKKEAEADDVLRRGPRPIVPYSSMFCLSPTNLLRRFCHYI
VTMRYFEMVILVVIALSSIALAAEDPVRTDSFRNNALKYMDYIFTGVFTFEMVIKMIDLG
LLLHPGAYFRDLWNILDFIVVTGALVAFAFSSFMGGSKGKDINTIKSLRVLRVLRPLKTI
KRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDESKELERDC
RGQYLDYEKEEVEAQPRQWKKYDFHYDNVLWALLTLFTVSTGEGWPMVLKHSVDATYEEQ
GPSPGFRMELSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDF
AISAKPLTRYMPQNKQSFQYKTWTFVVSPPFEYFIMAMIALNTVVLMMKFYDAPYEYELM
LKCLNIVFTSMFSMECILKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIANNFINL
SFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNI
ALDDATSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLGNRACDPYANASECGSDFA
YFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRI
SYNDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMPISNEDMTVHFTSTLMALIRTALE
IKLAPAGTKQHQCDAELRKEISSVWANLPQKTLDLLVPPHKPDEMTVGKVYAALMIFDFY
KQNKTTRDQTHQAPGSLSQMGPVSLFHPLKATLEQTQPAVLRGARVFLRQKSATSLSNGG
AIQTQESGIKESLSWGTQRTQDALYEARAPLERGHSAEIPVGQSGTLAVDVQMQNMTLRG
PDGEPQPGLESQGRAASMPRLAAETQSAPNASPMKRSISTLAPRQHGTQLCSTVLDRPPP
SQASHHHHHRCHRRRDKKQRSLEKGPSLSVDTEGAPSTAAGSGLPHGEGSTGCRRDRKQE
RGRSQERRQPSSSSSEKQRFYSCDRFGSREPPQPKPSLSSHATSPTAVLEPGPHPQGSGS
VNGSPLMSTSGASTPGRGGRRQLPQTPLTPRPSITYKTANSSPVHFAEGQSGLPAFSPGR
LSRGLSEHNALLQKEPLSQPLAPGSRIGSDPYLGQRVDSEASAHTLPEDTLTFEEAVATN
SGRSSRTSYVSSLTSQSHPLRRVPNGYHCTLGLSTGVRARHSYHHPDQDHWC
NT seq 6999 nt   +upstreamnt  +downstreamnt
atggtccgcttcggggacgagctaggcggccgctatgggggcaccggcggcggggagcgg
gctcggggcggcggggccggcggggcgggtggcccgggccaggggggtctgccgccgggc
cagcgggtcctgtacaagcagtccattgcgcagcgcgcacggaccatggccctgtacaac
cccatcccagtcaagcagaactgcttcaccgtcaaccgctcgctcttcgtcttcagcgag
gacaacgtcgtccgcaaatacgctaagcgcatcaccgaatggccgcccttcgaatacatg
atcctggccacgatcatcgccaactgcattgttctggccctggagcagcacctgcctgat
ggggacaagacccccatgtcagagcgactggatgacacggagccttacttcatcgggatc
ttttgcttcgaggcgggcatcaagatcatagccctgggctttgttttccacaagggctcc
taccttcggaacggctggaacgtcatggacttcgtggtggtcctcacggggattctcgcc
acagctggaactgactttgacctgcgcacactgagggctgtgcgtgtgcttaggcccctg
aagctggtgtctggaattccaagcttgcaggtggtgcttaagtctatcatgaaggccatg
gtcccgctgctgcagattgggctgttgctcttctttgccatcctcatgtttgccatcatc
ggcctcgagttctatatgggcaaattccataaggcctgtttccccaacaacacagataca
gagcctgtgggtgactttccctgtggtaaggagccccccgctcgtcagtgtgaggatgac
accgaatgccgggagtactggccaggacccaactttggcatcaccaattttgacaacatc
ctgtttgccatcttgactgtgttccagtgtatcaccatggagggctggaccgacatcctc
tacaacacaaatgatgcggccggcaacacatggaactggttgtacttcatccccctcatc
atcattggctccttcttcatgctcaacctggtgctgggtgtgctttcgggagagtttgcc
aaggagcgggagcgagtggagaaccgccgcgccttcctgaagctccgcaggcagcagcag
attgagcgagagctgaatgggtacttggagtggatcttcaaggcagaggaagtcatgttg
gcagaggaggacaagaatgcagaagagaagtcgcctttggatgtgttgaagagagctgcc
accaagaagagccgaaatgacctcatccatgcagaggagggggaggagcggtttgcagac
ctctgtgcagttgggtctccatttgctcgtgccagcctcaagagtgggaagacagagagc
tcatcatacttccggagaaaggagaagatgttccggttctttatccggcgtatggtgaaa
gcacagagcttctactgggtggtactgtgtgtggtggccctgaacacactgtgtgtggcc
atggtgcactataatcagcctcagcggcttaccactgcactgtactttgcagagtttgtt
ttcctgggtctcttcctcacggagatgtccctgaagatgtatggcctagggcccagaagt
tacttcaggtcttccttcaactgctttgactttggggtgattgtggggagtatctttgaa
gtggtctgggctgccatcaagccaggaacctcctttggaatcagtgtgctgcgggctctg
cgactgctgaggatattcaaagtcaccaagtactggaactccctgaggaacctggtggtc
tccctcctcaattccatgaagtccatcatcagccttctcttcctgcttttcctcttcatt
gtggtctttgctctgttggggatgcagctgttcgggggacagttcaactttcaagatgag
actccaactaccaattttgataccttcccagctgccatcctcactgtctttcagatcctg
acaggagaggactggaatgcagtaatgtatcatgggattgagtcacaaggtggagtcagc
aaaggcatgttttcttccttttacttcatcgtcctgacactgtttggaaactacaccctg
ctgaacgttttcctggccattgctgtggacaaccttgccaatgcccaggagttgaccaag
gatgaagaggagatggaagaagcagccaatcagaaacttgctcttcagaaggccaaagaa
gtagctgaagttagccccatgtctgctgccaatatctccatcgctgccaggcagcagaac
tcggccaaggcgcgctcagtatgggagcagcgggccagtcagctaaggctccagaatctg
cgtgccagctgtgaggcattgtacagcgagatggaccctgaggagcgcctgcgttatgcc
agcacgcgccacgtgaggccagatatgaagacacacatggaccgacccctagtggtggag
cctggtcgggatggcttgcggggacccgttgggagcaagtcaaagcctgaaggcacggag
gccactgaaagcactgacctaccacgccggcaccaccggcatcgtgatagggacaagacc
tcagccacagcacctgctggaggcgaaccggacaggacagactgctcaaaggccgaaagc
acggagaccgggacccgggaggaacgtgcgcgtcctcgtcgaagtcacagcaaggaggct
ccaggggctgacacgcaagtgcgctgtgagcgcagtaggcgtcaccaccggcgcggctcc
ccggaggaggccactgaacgggaacctcggcgccaccgtgcccaccggcatgcacaggac
tcaagcaaggagggcactgcgccggtgcttgtacccaagggtgagcgacgagcaagacac
cgaggcccacgcacgggcccacgtgaggcagagaacaacgaggagcccacacgcaggcac
cgtgcaaggcataaggtgccacccacactgcagcccccagagagggaggctgcagagaag
gagaccaacgtggtggaaggggataaggaaacccgaaatcatcagcccaagggacctcac
tgtgacctggaggccattgcagtgacaggtgtgggccctttgcacatgctgcccagcacc
tgtctccagaaagtggacgagcaaccagaggatgcagacaaccagcgtaatgttacccgg
atgggcagtcagccctcagatcccagcaccactgtgcatgtcccagtgacactgacaggc
ccttctggggagacccctgtagttcccagtggtaacatgaacctggaaggccaagcagag
ggcaagaaggaggcagaggctgatgatgtgctgagaagaggccccaggcccatcgttccc
tacagctccatgttttgtctcagccccaccaacctgcttcgtcgcttctgccattacatt
gtgaccatgcggtactttgagatggtaattctcgtggtcattgccttgagcagcattgcc
ctggctgcagaggatcctgtgcggaccgattcattcaggaacaacgctttaaagtacatg
gattacatcttcacaggagtcttcacctttgaaatggtcataaagatgatagacttgggc
ttgctgctgcaccccggggcctacttccgggacctgtggaacattctggacttcattgtt
gtcactggagccctggtggcgtttgcgttctcgagcttcatgggaggatccaaagggaaa
gacatcaataccatcaagtctctgagagttctgcgtgtcctgaggcccctcaagaccatc
aagcgactgcctaagctcaaggctgtctttgactgtgtggtgaactccctgaagaacgtc
ttgaacatcctgattgtctacatgctcttcatgttcatatttgccgtcattgcagtccag
ctcttcaaaggaaagttcttttactgtactgatgaatccaaggagctggagagggactgc
cggggtcaatatttggattatgagaaggaagaagtagaagcccagccacgacagtggaag
aaatatgacttccactatgacaatgtgctctgggccttgttgacgctgttcacagtgtcc
acaggagaggggtggcccatggtgctgaaacactctgtggatgccacctatgaggaacag
gggcccagccccgggttccggatggagctctccatcttctacgtggtctactttgtggtc
ttcccttttttctttgtcaacatctttgtggccttgatcattatcaccttccaggaacag
ggggacaaggtgatgtctgaatgcagcctagaaaagaatgagagggcttgcattgatttt
gccatcagcgccaagcccctgacacggtacatgcctcaaaacaaacagtcgttccagtat
aagacgtggacatttgtggtctctccaccctttgagtacttcatcatggctatgatagcc
ctcaacacagtggtgctgatgatgaagttctatgatgcaccttacgagtatgagctgatg
ctgaaatgcctgaacattgtcttcacatccatgttctcgatggagtgcatactgaagatc
atcgcctttggggtattgaactacttcagagatgcctggaacgtctttgactttgtcacg
gttttgggaagtattactgatattttagtaacagagattgcgaacaacttcatcaacctg
agcttccttcgcctcttccgggcggcacggctgatcaagctgcttcgccagggatacacc
atccgcatcctgctgtggacctttgtccagtcctttaaggcgctgccctacgtgtgcctc
ctcattgccatgctgttcttcatctacgccatcatcggcatgcaggtttttggaaacatt
gcccttgatgatgctaccagtatcaaccgacacaacaacttccggacatttctgcaagcc
ttaatgctattgttcaggagtgccactggggaggcctggcatgagatcatgttgtcttgt
ctgggcaaccgggcctgtgacccatatgccaacgccagtgagtgcgggagcgactttgcc
tatttttattttgtctccttcatcttcctctgttcctttctgatgttgaacctctttgtt
gctgtaatcatggacaattttgagtacctcactcgggactcttccatcctagggcctcac
cacctagacgaattcattcgagtctgggctgaatacgacccagctgcgtgtgggcgcatc
agttacaatgacatgtttgagatgctgaaacacatgtccccacctctggggttggggaag
aaatgcccggctcgagttgcatacaagcgcctggttcgcatgaacatgcccatatccaat
gaggacatgacggtgcactttacatccacactgatggccctcatccggacagcactggag
atcaagcttgccccagcgggcacaaagcagcaccagtgtgatgctgagctgagaaaggag
atctcctctgtgtgggctaatctgccccagaagactctggacttactggtgccaccccac
aagcctgacgagatgacagtggggaaggtctatgcggctctcatgatatttgacttctac
aaacagaacaaaaccaccagagatcagactcaccaagctcctggaagcctgtcccagatg
ggtcccgtttccctgttccaccctctgaaagccaccctggagcagacacagcccgctgtg
ctccgaggagctcgggttttccttcgacaaaagagtgcaacttccctcagcaatgggggt
gccatacaaacccaggaaagtggcatcaaggagtcgctgtcctggggcacacagaggacc
caagatgcactttatgaggccagagcacctctagaacgtggccattctgcagagatccct
gtggggcagtcaggaacactggcagtggatgtccagatgcagaacatgacactgagagga
ccagatggggagccccagcctgggctggaaagccaaggcagagctgcctctatgccacgc
ctagcggcagaaacacagtcggcccctaatgccagccccatgaagcgctccatctccaca
ctggctccacgccagcatgggactcagctttgcagcacagttctggaccggcctcctcct
agccaggcgtcacatcaccaccaccaccgctgccaccggcgcagagacaagaagcaaagg
tccctggaaaaggggcccagcctgtctgttgacacagaaggtgcaccaagcactgctgcg
ggatctggcctgccccatggagaaggatccaccggctgccggcgggaccgtaagcaggag
cgaggccggtcccaggagcggaggcagccctcgtcctcttcttcagagaagcagcgcttc
tactcctgtgaccgctttgggagcagggagcccccgcaaccgaagccctccctcagtagt
cacgccacatcgccaacagcagtactagagccaggaccccacccacagggcagtggttcc
gttaatgggagccccttgatgtcaacatccggtgctagcaccccgggccgaggtgggcgg
aggcagctcccccagactcctctgaccccacgccccagcatcacctacaagaccgccaat
tcctcgcctgtccactttgctgagggtcagagcggcctcccagccttctcccctggccgt
ctcagccgcggcctttctgaacacaatgctctgctccagaaagagcccctgagccagcct
ctagctcctggctcccgaatcggctctgacccttacctagggcagcgtgtggacagtgag
gcctccgcccacaccctgcctgaggatacactcacctttgaagaggcagtggccaccaac
tctggccgctcctccaggacttcctatgtgtcctccctcacttcccagtcccaccctctc
cgccgtgtacccaatggctatcactgcactttgggactcagcactggcgtccgggcgcgg
cacagctaccaccaccccgaccaggaccactggtgctag

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