Mus pahari (shrew mouse): 110318292
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Entry
110318292 CDS
T05929
Symbol
Capn3
Name
(RefSeq) calpain-3 isoform X1
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
mpah
Mus pahari (shrew mouse)
Pathway
mpah04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mpah00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
110318292 (Capn3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mpah01002
]
110318292 (Capn3)
Enzymes [BR:
mpah01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
110318292 (Capn3)
Peptidases and inhibitors [BR:
mpah01002
]
Cysteine peptidases
Family C2: calpain family
110318292 (Capn3)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
Calpain_u2
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
110318292
NCBI-ProteinID:
XP_021048872
Ensembl:
MGP_PahariEiJ_G0025610
LinkDB
All DBs
Position
3:103882237..103923561
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AA seq
821 aa
AA seq
DB search
MPTVISPTVAPRTGAEPRSPGPVPHPAQGKTTEAGGGHPSGIYSAIISRNFPIIGVKEKT
FEQLRKKCLEKKVLYLDPEFPPDETSLFYSQKFPIQFVWKRPPEICENPRFIIGGANRTD
ICQGDLGDCWFLAAIACLTLNERLLFRVIPHDQSFTENYAGIFHFQFWRYGDWVDVVIDD
CLPTYNNQLVFTKSNHRNEFWSALLEKAYAKLHGSYEALKGGNTTEAMEDFTGGVTEFFE
IKDAPSDMYKIMRKAIERGSLMGCSIDDGTNMTYGTSPSGLNMGELIARMVRNMDNSLLR
DSDLDPRGSDDRPSRTIVPVQYETRMACGLVKGHAYSVTGLEEALFKGEKVKLVRLRNPW
GQVEWNGSWSDGWKDWSFVDKDEKARLQHQVTEDGEFWMSYDDFVYHFTKLEICNLTADA
LESDKLQTWTVSVNEGRWVRGCSAGGCRNFPDTFWTNPQYRLKLLEEDDDPDDSEVICSF
LVALMQKNRRKDRKLGANLFTIGFAIYEVPKEMHGNKQHLQKDFFLYNASKARSKTYINM
REVSQRFRLPPSEYVIVPSTYEPHQEGEFILRVFSEKRNLSEEAENTISVDRPVKKKKNK
PIIFVSDRANSNKELGVDQEAEKGKDKAGPDKPGETPQPRPGHTDQESEEQQQFRNIFRQ
IAGDDMEICADELKNVLNTVVNKHKDLKTQGFTLESCRSMIALMDTDGSGRLNLQEFHHL
WKKIKAWQKIFKHYDTDHSGTINSYEMRNAVNDAGFHLNSQLYDIITMRYADKHMNIDFD
SFICCFVRLEGMFRAFNAFDKDGDGIIKLNVLEWLQLTMYA
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgccaactgttattagtccaactgtggccccaaggacaggggctgagcccaggtcccca
gggccagttcctcacccagctcaaggcaagaccaccgaggctggaggcggacacccaagc
ggcatctattcagccatcattagccgcaattttccgatcatcggtgtgaaagagaagacg
tttgagcagctccgcaagaagtgcctagagaagaaagttctttatctggaccctgagttc
ccaccggatgagacctctctcttttacagtcagaagttccccatccagttcgtctggaag
agacctccggaaatttgtgagaatccccggtttatcattggtggagccaacaggactgac
atctgccaaggagatctaggggactgctggtttctcgcagccatcgcctgcctgaccctg
aacgagcggctgcttttccgagttataccccatgatcaaagtttcactgaaaactacgca
gggatcttccacttccagttctggcgctatggagactgggtagatgtggtcattgatgac
tgtctgccaacatacaacaatcagctggttttcaccaaatccaaccaccgcaatgagttc
tggagtgcccttctggagaaggcttatgccaagctccatggctcctatgaagctctgaaa
ggtgggaacaccacagaagccatggaggacttcacaggaggggtgacagagttttttgag
atcaaggatgctccaagtgacatgtacaagatcatgaggaaagctatcgagagaggctcc
ctcatgggctgctccattgacgatggcacgaacatgacttacggaacctctccttctggt
ctgaacatgggggagttgattgcccggatggtgagaaatatggataactcgctgctcaga
gactcagacctggaccccaggggctcagatgacagaccgtcacggacaattgttccggtg
cagtatgaaacaagaatggcctgtgggctggtgaaagggcatgcctattcggtcactggg
ctggaggaggccctgttcaaaggtgagaaggtgaagttggtgcggctgcggaacccctgg
ggccaggtggagtggaatggctcttggagtgacggttggaaagattggagctttgtggac
aaagatgagaaggcccgtctacagcaccaggttaccgaggatggagagttctggatgtca
tatgatgactttgtctaccatttcacgaagctggagatctgcaacctcacagctgatgcc
ctggagtccgataagcttcagacctggacagtgtctgtaaacgagggccgctgggtgagg
ggctgttctgctggaggctgccgaaacttcccagacactttctggaccaacccacagtac
cgcctcaagcttctggaggaagacgatgaccctgacgactctgaggtgatctgcagcttc
cttgtggctctgatgcagaagaaccggcgcaaggaccggaagctgggagccaacctcttc
accatcggcttcgccatctacgaggttcccaaagagatgcacgggaataagcaacacctg
cagaaagatttcttcttgtacaacgcctccaaggccagaagcaaaacctacatcaacatg
cgggaggtgtcccagcgcttccgcctgccgcccagcgagtatgtcatcgtaccttccacc
tacgagccccaccaggagggggaattcatcctccgagtcttctctgaaaagaggaatctc
tctgaggaagctgaaaatacaatctctgtggatcggccagtgaaaaagaaaaaaaacaag
cccatcatcttcgtttcagacagagcaaacagcaacaaggagctgggtgtggaccaggag
gcagagaagggcaaagacaaagcagggcccgataaaccaggggaaaccccacagccacgg
cctggccacacagaccaggaaagtgaggagcagcagcagttccggaacatcttcaggcag
atcgcaggcgacgacatggagatctgtgcagatgaactcaagaatgtcctcaacacagtg
gtgaacaaacacaaggatctgaagacacaaggattcacgctggagtcctgcagaagcatg
atagctctcatggacacagatggctctgggagactgaatcttcaagagttccatcacctc
tggaaaaagatcaaggcctggcagaaaatcttcaaacactatgacacagaccattccggt
accatcaatagctatgagatgcgaaatgcagtcaatgatgcaggcttccatctcaacagc
caactctatgacatcatcaccatgcgctacgctgacaaacacatgaacattgactttgac
agcttcatctgctgcttcgtcaggctggaagggatgttcagagcttttaacgcatttgac
aaggatggcgatggtatcatcaaactgaacgtacttgagtggctgcagcttaccatgtat
gcctga
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